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MacroAPE 1083:CNhs11354 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;244.01950295317553;481.38095774435806;199.83603415057226;269.91342170465316!2;545.8782969179549;272.6705005690145;113.94117584237618;262.659...")
 
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!13231-141I9;0.271138!10696-109G3;0.27242!10493-107B7;0.78525!10494-107B8;0.204007!10850-111F4;0.000804081!10851-111F5;0.043758!10852-111F6;0.797618!10853-111F7;0.871089!10854-111F8;0.0827803!10855-111F9;0.353381!10856-111G1;0.770548!10847-111F1;0.185286!10846-111E9;0.384389!10848-111F2;0.118689!10845-111E8;0.0730908!10857-111G2;0.323219!10858-111G3;0.688732!10156-103A3;0.13383!11901-125F2;0.251207!11902-125F3;0.423147!11903-125F4;0.942558!10689-109F5;0.846614!10648-109A9;0.233229!10784-110H1;0.121564!10744-110C6;0.0485664!10772-110F7;0.695448!10474-106I6;0.737633!10600-108E6;0.566697!10684-109E9;0.147657!12226-129F3;0.404154!12227-129F4;0.1151!10508-107D4;0.928551!10539-107G8;0.940089!10607-108F4;0.513417!10555-107I6;0.402349!10774-110F9;0.789089!10637-108I7;0.286477!10663-109C6;0.594485!10728-110A8;0.0982838!10729-110A9;0.229218!10430-106D7;0.971144!10730-110B1;0.136831!10813-111B3;0.496237!10812-111B2;0.168099!10037-101F1;0.534834!10172-103C1;0.247192!10163-103B1;0.199215!10076-102A4;0.262795!10073-102A1;0.305371!10036-101E9;0.8251!10195-103E6;0.30664!10277-104E7;0.224909!10434-106E2;0.694993!10550-107I1;0.164711!10545-107H5;0.194786!10544-107H4;0.451318!10704-109H2;0.0949903!10510-107D6;0.670662!10558-107I9;0.0127736!10020-101D2;0.481269!10732-110B3;0.233055!10049-101G4;0.670145!10698-109G5;0.710347!10437-106E5;0.794492!10417-106C3;0.00365645!10035-101E8;0.00913556!10171-103B9;0.279655!10157-103A4;0.312658!10034-101E7;0.236696!10072-101I9;0.32108!10199-103F1;0.750923!10200-103F2;0.322527!10697-109G4;0.051331!10723-110A3;0.650167!10179-103C8;0.00901566!10160-103A7;0.39026!10180-103C9;0.280648!10162-103A9;0.474817!10021-101D3;0.48985!10840-111E3;0.407875!10706-109H4;0.947215!10033-101E6;0.256183!10032-101E5;0.280483!10490-107B4;0.264989!10439-106E7;0.0636761!10022-101D4;0.133188!10176-103C5;0.275627!10469-106I1;0.229815!10067-101I4;0.106809!10411-106B6;0.186123!10471-106I3;0.239225!10030-101E3;0.124284!10475-106I7;0.174801!10787-110H4;0.442403!10477-106I9;0.57298!10695-109G2;0.554298!11771-123I7;0.236178!11772-123I8;0.165621!11773-123I9;0.492866!10093-102C3;0.0347076!10442-106F1;0.688897!10442-106F1;0.105676!10201-103F3;0.0741993!10639-108I9;0.410979!11843-124H7;0.0122943!11841-124H5;0.369461!10693-109F9;0.509607!10436-106E4;0.0342468!10483-107A6;0.24001!10282-104F3;0.119295!10023-101D5;0.469743!10066-101I3;0.435546!10065-101I2;0.316449!10800-110I8;0.138572!10610-108F7;0.0285877!10841-111E4;0.529484!10541-107H1;0.28735!10842-111E5;0.0594862!10562-108A4;0.497931!10024-101D6;0.0282322!10064-101I1;0.118701!10609-108F6;0.0088205!10048-101G3;0.0444446!10781-110G7;0.270183!10181-103D1;0.0846813!10159-103A6;0.245259!10056-101H2;0.233645!10737-110B8;0.196597!10025-101D7;0.738037!10044-101F8;0.190122!10424-106D1;0.143635!10463-106H4;0.927398!10616-108G4;0.00706713!10486-107A9;0.00233882!10062-101H8;0.12149!10202-103F4;0.402118!10158-103A5;0.210989!10441-106E9;0.208968!10031-101E4;0.308175!10063-101H9;0.266589!10063-101H9;0.692911!11763-123H8;0.0109283!11765-123I1;0.141126!11768-123I4;0.1537!10807-111A6;0.0376846!10790-110H7;0.289369!10798-110I6;0.738305!10786-110H3;0.717789!10591-108D6;0.0723056!10593-108D8;0.326123!10590-108D5;0.116737!10026-101D8;0.325381!10096-102C6;0.150803!10168-103B6;0.791352!10154-103A1;0.351271!10209-103G2;0.211062!10061-101H7;0.15717!10027-101D9;0.353452!10043-101F7;0.847613!10783-110G9;0.620736!10028-101E1;0.0085234!10060-101H6;0.855934!10203-103F5;0.884801!10059-101H5;0.160465!10047-101G2;0.222906!10029-101E2;0.29711!10058-101H4;0.245742!10418-106C4;0.136989!10492-107B6;0.00126691!10694-109G1;0.10387!10797-110I5;0.340048!10057-101H3;0.153783!10100-102D1;0.109854!10055-101H1;0.860099!10204-103F6;0.364683!10191-103E2;0.700359!10563-108A5;0.100839
|name=CNhs11354_bl_f2
|name=CNhs11354_bl_f2
|tomtom_result=Trl#MA0205.1;0;0.00183043;0.871286;1;10;CACAGAGACA;GAGAGAGCAA;-!RUNX1#MA0002.2;4;0.0165634;7.88418;1;7;CACAGAGACA;AAACCACAGAC;-!RME1#MA0370.1;0;0.016728;7.96253;1;10;CACAGAGACA;TCCAAAGGAA;+!YKL222C#MA0428.1;0;0.0199823;9.51156;1;9;CACAGAGACA;AACGGAAAT;+
}}
}}

Latest revision as of 13:28, 7 September 2012

Full Name: CNhs11354_bl_f2

Motif matrix
POACGT
1244.01950295317553481.38095774435806199.83603415057226269.91342170465316
2545.8782969179549272.6705005690145113.94117584237618262.6599432234138
3227.79333170236814959.94360228078133.70649128480464853.7064912848046485
41195.14991655275980.00.00.0
50.00.01195.14991655275980.0
61188.9838076612783.0226863187554311.57171128636305071.5717112863630507
7429.9544262805175743.636125952269815684.396346308399237.16301801157246
8558.3365688712199152.12656354822386393.819497816609990.86728631670525
9385.0463999244054454.3611161571974186.41980837052728169.32259210062895
10499.1890432021671316.36590297104215222.6609616499222156.93400872962735

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.100.001830430.871286110CACAGAGACAGAGAGAGCAA-
RUNX1#MA0002.240.01656347.8841817CACAGAGACAAAACCACAGAC-
RME1#MA0370.100.0167287.96253110CACAGAGACATCCAAAGGAA+
YKL222C#MA0428.100.01998239.5115619CACAGAGACAAACGGAAAT+
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