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MacroAPE 1083:IRF2 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;11.423995308465452;22.57580308570867;34.30109037401047;14.699111231815309!2;19.898524872369386;3.2152822616576544;58.61956652047142;1.266626...")
 
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2.65662e-06!10412-106B7;2.92555e-05!12231-129F8;2.49819e-05!12232-129F9;0.53159!12233-129G1;0.40648!12234-129G2;0.731337!10414-106B9;0.469636!10170-103B8;3.92107e-05!10183-103D3;0.000127948!10150-102I6;9.29328e-05!10174-103C3;0.00114399!10155-103A2;0.000458397!10038-101F2;0.00207542!10838-111E1;0.0100231!10759-110E3;4.33391e-06!10514-107E1;1.4908e-05!10465-106H6;0.226463!10691-109F7;0.280363!10843-111E6;3.44585e-11!10844-111E7;1.52174e-06!11747-123G1;3.20826e-07!11748-123G2;0.223356!11749-123G3;0.533315!11750-123G4;0.583493!11751-123G5;0.332391!11840-124H4;0.256931!11752-123G6;0.000355412!11753-123G7;0.0178015!11754-123G8;0.460082!11755-123G9;0.451038!11756-123H1;0.912815!11833-124G6;0.738422!11760-123H5;0.00184423!11836-124G9;0.552218!11758-123H3;0.618053!11835-124G8;0.202655!11762-123H7;0.155778!11838-124H2;0.49495!11757-123H2;0.629948!11759-123H4;0.347843!11761-123H6;0.423754!11842-124H6;0.484849!11837-124H1;0.463729!10568-108B1;0.180367!13230-141I8;0.0503337!13231-141I9;0.181144!10696-109G3;0.180917!10493-107B7;0.12651!10494-107B8;0.00425533!10850-111F4;0.0116779!10851-111F5;0.143762!10852-111F6;0.205425!10853-111F7;0.700471!10854-111F8;2.92714e-10!10855-111F9;0.321661!10856-111G1;0.016834!10847-111F1;0.818274!10846-111E9;0.22481!10848-111F2;0.602823!10845-111E8;8.84893e-07!10857-111G2;0.000744001!10858-111G3;0.537724!10156-103A3;2.83283e-05!11901-125F2;0.000790755!11902-125F3;0.00389479!11903-125F4;0.000592286!10689-109F5;0.000261764!10648-109A9;0.0973389!10784-110H1;0.390443!10744-110C6;0.468164!10772-110F7;1.33348e-10!10474-106I6;0.000104837!10600-108E6;7.06132e-12!10684-109E9;0.823933!12226-129F3;0.935541!12227-129F4;0.00257258!10508-107D4;0.000336733!10539-107G8;5.08947e-07!10607-108F4;0.000152096!10555-107I6;0.000417592!10774-110F9;2.30914e-06!10637-108I7;0.00264085!10663-109C6;0.000721542!10728-110A8;0.00447365!10729-110A9;0.00684843!10430-106D7;0.0255942!10730-110B1;0.0307004!10813-111B3;2.66138e-08!10812-111B2;0.037684!10037-101F1;0.00739223!10172-103C1;0.00079781!10163-103B1;4.78471e-05!10076-102A4;0.00210297!10073-102A1;0.000117056!10036-101E9;4.22671e-07!10195-103E6;0.000284821!10277-104E7;0.000732486!10434-106E2;0.00620604!10550-107I1;0.944589!10545-107H5;0.00851675!10544-107H4;0.0034957!10704-109H2;0.881517!10510-107D6;0.797057!10558-107I9;0.0358667!10020-101D2;0.0205636!10732-110B3;0.596092!10049-101G4;0.931897!10698-109G5;0.183721!10437-106E5;0.000825757!10417-106C3;0.469546!10035-101E8;0.484472!10171-103B9;0.000568356!10157-103A4;3.12495e-05!10034-101E7;0.000944852!10072-101I9;0.000574534!10199-103F1;2.3807e-07!10200-103F2;0.031958!10697-109G4;0.0069833!10723-110A3;0.00111019!10179-103C8;0.000959011!10160-103A7;1.09678e-05!10180-103C9;5.88356e-05!10162-103A9;0.000156978!10021-101D3;0.00599612!10840-111E3;0.945006!10706-109H4;2.27771e-11!10033-101E6;0.515767!10032-101E5;0.00156317!10490-107B4;0.000278439!10439-106E7;0.0945601!10022-101D4;0.0017527!10176-103C5;0.178839!10469-106I1;0.000678936!10067-101I4;0.490669!10411-106B6;0.00164578!10471-106I3;0.0225745!10030-101E3;0.000334516!10475-106I7;0.0111247!10787-110H4;9.59516e-10!10477-106I9;0.00380365!10695-109G2;0.00427212!11771-123I7;0.110763!11772-123I8;0.0547518!11773-123I9;0.0165167!10093-102C3;0.0514365!10442-106F1;0.14364!10442-106F1;0.610479!10201-103F3;0.138954!10639-108I9;0.0237512!11843-124H7;0.630719!11841-124H5;0.686055!10693-109F9;0.0385994!10436-106E4;0.224522!10483-107A6;0.0458566!10282-104F3;0.574945!10023-101D5;6.52315e-05!10066-101I3;0.00021346!10065-101I2;0.000123927!10800-110I8;9.73497e-05!10610-108F7;3.60374e-05!10841-111E4;2.2475e-07!10541-107H1;0.00107715!10842-111E5;7.1918e-05!10562-108A4;1.29193e-08!10024-101D6;0.216804!10064-101I1;0.0612732!10609-108F6;0.506841!10048-101G3;0.00132382!10781-110G7;0.0282485!10181-103D1;7.00115e-06!10159-103A6;0.000508505!10056-101H2;0.0332905!10737-110B8;0.000575744!10025-101D7;0.0792301!10044-101F8;3.26215e-05!10424-106D1;0.0012584!10463-106H4;9.62336e-11!10616-108G4;0.140883!10486-107A9;0.110046!10062-101H8;0.213499!10202-103F4;0.110825!10158-103A5;0.00138454!10441-106E9;0.0190085!10031-101E4;9.79711e-09!10063-101H9;0.000274468!10063-101H9;9.82391e-08!11763-123H8;0.192974!11765-123I1;0.358253!11768-123I4;0.327466!10807-111A6;0.465174!10790-110H7;1.58751e-05!10798-110I6;3.06935e-05!10786-110H3;0.00034045!10591-108D6;9.49989e-09!10593-108D8;5.98892e-08!10590-108D5;9.77577e-12!10026-101D8;1.7186e-06!10096-102C6;0.000142999!10168-103B6;3.74709e-07!10154-103A1;0.000212549!10209-103G2;0.00818049!10061-101H7;0.00943878!10027-101D9;0.000262393!10043-101F7;0.00076203!10783-110G9;0.00874511!10028-101E1;0.578302!10060-101H6;0.92032!10203-103F5;0.000358948!10059-101H5;0.00107849!10047-101G2;1.97284e-06!10029-101E2;1.40064e-05!10058-101H4;0.383571!10418-106C4;0.00073114!10492-107B6;0.488382!10694-109G1;0.0115033!10797-110I5;0.124563!10057-101H3;0.703927!10100-102D1;0.001922!10055-101H1;0.19035!10204-103F6;7.2792e-05!10191-103E2;0.036692!10563-108A5;0.00322147
|name=IRF2_f1
|name=IRF2_f1
|tomtom_result=IRF2#MA0051.1;0;1.12215e-14;5.34144e-12;1.06463e-11;14;GGAAAGTGAAAGCA;GGAAAGCGAAACCAAAAC;+!IRF1#MA0050.1;-1;1.6081e-09;7.65454e-07;7.62836e-07;12;GGAAAGTGAAAGCA;GAAAGCGAAACC;+!STAT1#MA0137.1;0;6.75755e-08;3.2166e-05;2.13706e-05;14;GGAAAGTGAAAGCA;GGAAAACGAAACTG;+!tll#MA0459.1;-1;0.000668116;0.318023;0.158468;10;GGAAAGTGAAAGCA;AAAAGTCAAA;+!Dof3#MA0021.1;-2;0.00121023;0.576071;0.22964;6;GGAAAGTGAAAGCA;AAAGCG;+!AZF1#MA0277.1;-2;0.00190029;0.90454;0.300482;9;GGAAAGTGAAAGCA;AAAAAGAAA;+!THI2#MA0407.1;0;0.00282531;1.34485;0.382928;14;GGAAAGTGAAAGCA;GGAAACTCTAAGAAC;+!id1#MA0120.1;1;0.00337442;1.60622;0.400182;11;GGAAAGTGAAAGCA;CGAAAAGGAAAA;-!SWI4#MA0401.1;-3;0.00584902;2.78413;0.61658;8;GGAAAGTGAAAGCA;ACGCGAAA;+!PBF#MA0064.1;-2;0.00813032;3.87003;0.771359;5;GGAAAGTGAAAGCA;AAAGC;+!Trl#MA0205.1;-1;0.0102732;4.89003;0.822956;10;GGAAAGTGAAAGCA;GAGAGAGCAA;-!SPT23#MA0388.1;-2;0.0109622;5.21802;0.822956;8;GGAAAGTGAAAGCA;GAAATCAA;+!STB3#MA0390.1;0;0.0112764;5.36758;0.822956;14;GGAAAGTGAAAGCA;CCAGAGTGAAAAATTTTGGAC;-!Klf4#MA0039.1;-2;0.0148331;7.06054;0.93626;10;GGAAAGTGAAAGCA;TAAAGGAAGG;+!MNB1A#MA0053.1;-2;0.0150361;7.15718;0.93626;5;GGAAAGTGAAAGCA;AAAGC;+!ABF1#MA0265.1;4;0.015798;7.51984;0.93626;12;GGAAAGTGAAAGCA;TCGTATAAAGTGATAA;+!INO4#MA0322.1;-1;0.0167812;7.98784;0.93626;9;GGAAAGTGAAAGCA;GCATGTGAA;+!HMG-I/Y#MA0045.1;3;0.0177632;8.45526;0.93626;13;GGAAAGTGAAAGCA;CAACAAATGGAAAAAC;+!INO2#MA0321.1;-1;0.0189931;9.04071;0.948399;9;GGAAAGTGAAAGCA;GCATGTGAA;+
}}
}}

Latest revision as of 13:25, 7 September 2012

Full Name: IRF2_f1

Motif matrix
POACGT
111.42399530846545222.5758030857086734.3010903740104714.699111231815309
219.8985248723693863.215282261657654458.619566520471421.266626345501503
373.06185482760361.85122312034834967.3074596855855790.7794623664624615
478.555690526956440.00.87689516227026943.567414310773272
582.561552418864820.00.00.4384475811351347
617.024257396039059.64584678497292352.919747965714643.410147853273267
73.75116263860059630.6118850684774453.215282261657654445.42167003126419
83.70244624069669030.079.297553759303230.0
981.684657256594520.01.31534274340540.0
1081.538508062882830.97432795807807990.00.4871639790390383
1180.953911288035981.0717607538858820.00.9743279580780799
124.38447581135134728.07863237747447445.080655245936835.456236565237229
135.74853495266065233.1075386253648713.12694556372671431.01698085824773
1429.38285785709159414.53972110293989126.58378864899244212.49363239097597

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

IRF2#MA0051.101.12215e-145.34144e-121.06463e-1114GGAAAGTGAAAGCAGGAAAGCGAAACCAAAAC+
IRF1#MA0050.1-11.6081e-097.65454e-077.62836e-0712GGAAAGTGAAAGCAGAAAGCGAAACC+
STAT1#MA0137.106.75755e-083.2166e-052.13706e-0514GGAAAGTGAAAGCAGGAAAACGAAACTG+
tll#MA0459.1-10.0006681160.3180230.15846810GGAAAGTGAAAGCAAAAAGTCAAA+
Dof3#MA0021.1-20.001210230.5760710.229646GGAAAGTGAAAGCAAAAGCG+
AZF1#MA0277.1-20.001900290.904540.3004829GGAAAGTGAAAGCAAAAAAGAAA+
THI2#MA0407.100.002825311.344850.38292814GGAAAGTGAAAGCAGGAAACTCTAAGAAC+
id1#MA0120.110.003374421.606220.40018211GGAAAGTGAAAGCACGAAAAGGAAAA-
SWI4#MA0401.1-30.005849022.784130.616588GGAAAGTGAAAGCAACGCGAAA+
PBF#MA0064.1-20.008130323.870030.7713595GGAAAGTGAAAGCAAAAGC+
Trl#MA0205.1-10.01027324.890030.82295610GGAAAGTGAAAGCAGAGAGAGCAA-
SPT23#MA0388.1-20.01096225.218020.8229568GGAAAGTGAAAGCAGAAATCAA+
STB3#MA0390.100.01127645.367580.82295614GGAAAGTGAAAGCACCAGAGTGAAAAATTTTGGAC-
Klf4#MA0039.1-20.01483317.060540.9362610GGAAAGTGAAAGCATAAAGGAAGG+
MNB1A#MA0053.1-20.01503617.157180.936265GGAAAGTGAAAGCAAAAGC+
ABF1#MA0265.140.0157987.519840.9362612GGAAAGTGAAAGCATCGTATAAAGTGATAA+
INO4#MA0322.1-10.01678127.987840.936269GGAAAGTGAAAGCAGCATGTGAA+
HMG-I/Y#MA0045.130.01776328.455260.9362613GGAAAGTGAAAGCACAACAAATGGAAAAAC+
INO2#MA0321.1-10.01899319.040710.9483999GGAAAGTGAAAGCAGCATGTGAA+