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MacroAPE 1083:CNhs11331 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;74.74626372613481;98.2859328846454;246.33882021093712;66.0211306866517!2;139.89647895987983;68.93251704099588;132.5955001000861;143.96765140...")
 
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0775-110G1;0.0911557!10412-106B7;0.827001!12231-129F8;7.44314e-09!12232-129F9;0.000364374!12233-129G1;0.00446006!12234-129G2;0.00123449!10414-106B9;3.49502e-06!10170-103B8;0.0525622!10183-103D3;0.135827!10150-102I6;0.10264!10174-103C3;0.14156!10155-103A2;0.00643773!10038-101F2;0.00965806!10838-111E1;0.0137127!10759-110E3;1.6148e-08!10514-107E1;0.000450621!10465-106H6;0.000107635!10691-109F7;2.37869e-05!10843-111E6;0.269665!10844-111E7;0.232796!11747-123G1;0.830052!11748-123G2;1.57337e-07!11749-123G3;1.29278e-07!11750-123G4;1.40763e-05!11751-123G5;0.00694039!11840-124H4;0.0599898!11752-123G6;0.0583322!11753-123G7;0.00128371!11754-123G8;3.94695e-05!11755-123G9;7.88469e-09!11756-123H1;3.50367e-10!11833-124G6;1.77567e-07!11760-123H5;0.000127094!11836-124G9;4.849e-08!11758-123H3;1.59956e-05!11835-124G8;3.73959e-06!11762-123H7;0.0243568!11838-124H2;0.134108!11757-123H2;0.875879!11759-123H4;0.000187436!11761-123H6;2.07254e-09!11842-124H6;0.229293!11837-124H1;0.000922381!10568-108B1;0.0033746!13230-141I8;5.37252e-06!13231-141I9;0.00368593!10696-109G3;0.000931662!10493-107B7;5.81772e-07!10494-107B8;0.000654338!10850-111F4;0.231312!10851-111F5;0.0746639!10852-111F6;0.00180259!10853-111F7;0.32317!10854-111F8;4.25772e-05!10855-111F9;0.000721048!10856-111G1;0.010116!10847-111F1;0.555729!10846-111E9;2.36149e-05!10848-111F2;0.493379!10845-111E8;0.0963722!10857-111G2;0.0416972!10858-111G3;0.00162128!10156-103A3;3.36199e-05!11901-125F2;0.163856!11902-125F3;0.185776!11903-125F4;0.345712!10689-109F5;0.167187!10648-109A9;2.24049e-09!10784-110H1;1.03763e-10!10744-110C6;0.000176432!10772-110F7;0.431183!10474-106I6;0.0156531!10600-108E6;0.654772!10684-109E9;4.782e-07!12226-129F3;7.80599e-10!12227-129F4;1.30244e-14!10508-107D4;4.60602e-09!10539-107G8;2.36226e-06!10607-108F4;1.32399e-09!10555-107I6;0.000757916!10774-110F9;2.04016e-09!10637-108I7;0.000795552!10663-109C6;1.89467e-05!10728-110A8;0.000134855!10729-110A9;1.55743e-05!10430-106D7;2.55663e-09!10730-110B1;0.0134965!10813-111B3;0.198381!10812-111B2;0.000724977!10037-101F1;1.85593e-08!10172-103C1;0.0508385!10163-103B1;0.129855!10076-102A4;0.142329!10073-102A1;0.111579!10036-101E9;0.22246!10195-103E6;0.0643036!10277-104E7;0.0583842!10434-106E2;0.308383!10550-107I1;0.0107395!10545-107H5;0.989865!10544-107H4;1.15053e-11!10704-109H2;0.00587559!10510-107D6;4.78466e-15!10558-107I9;1.16162e-06!10020-101D2;4.05656e-07!10732-110B3;0.0124452!10049-101G4;1.31506e-07!10698-109G5;1.28906e-21!10437-106E5;0.629884!10417-106C3;0.166573!10035-101E8;3.93674e-10!10171-103B9;0.0808364!10157-103A4;0.141519!10034-101E7;0.11786!10072-101I9;0.0657917!10199-103F1;0.178497!10200-103F2;3.80593e-13!10697-109G4;1.50097e-05!10723-110A3;0.00385017!10179-103C8;1.44091e-10!10160-103A7;0.0443638!10180-103C9;0.1309!10162-103A9;4.06889e-09!10021-101D3;3.02014e-06!10840-111E3;1.12867e-07!10706-109H4;0.795528!10033-101E6;3.17903e-11!10032-101E5;0.0362249!10490-107B4;0.0581502!10439-106E7;0.959732!10022-101D4;0.00783475!10176-103C5;1.68787e-06!10469-106I1;0.0987994!10067-101I4;0.000235418!10411-106B6;0.00812933!10471-106I3;0.315308!10030-101E3;0.961179!10475-106I7;0.0120596!10787-110H4;1.26303e-06!10477-106I9;0.000208993!10695-109G2;5.95422e-07!11771-123I7;0.000199216!11772-123I8;0.754489!11773-123I9;0.23867!10093-102C3;2.71449e-05!10442-106F1;3.7024e-16!10442-106F1;4.51337e-06!10201-103F3;3.04796e-07!10639-108I9;1.39005e-11!11843-124H7;6.1629e-09!11841-124H5;0.000209113!10693-109F9;1.17019e-05!10436-106E4;0.000908167!10483-107A6;1.77068e-06!10282-104F3;4.8602e-05!10023-101D5;0.00546537!10066-101I3;0.0182145!10065-101I2;0.0502958!10800-110I8;4.59815e-06!10610-108F7;0.375526!10841-111E4;0.821704!10541-107H1;1.75449e-05!10842-111E5;0.796306!10562-108A4;1.24477e-07!10024-101D6;3.68234e-05!10064-101I1;8.71683e-16!10609-108F6;2.37201e-08!10048-101G3;2.36326e-14!10781-110G7;0.0302752!10181-103D1;3.59613e-08!10159-103A6;0.121447!10056-101H2;0.0950947!10737-110B8;0.148836!10025-101D7;1.00907e-06!10044-101F8;0.00406008!10424-106D1;0.0108783!10463-106H4;0.172225!10616-108G4;9.36348e-07!10486-107A9;1.16761e-05!10062-101H8;0.0011455!10202-103F4;4.37043e-09!10158-103A5;8.27641e-14!10441-106E9;0.109057!10031-101E4;6.38876e-08!10063-101H9;0.0534845!10063-101H9;0.447735!11763-123H8;6.83023e-09!11765-123I1;0.107769!11768-123I4;0.235879!10807-111A6;0.0763051!10790-110H7;0.000191071!10798-110I6;0.0024087!10786-110H3;0.0020639!10591-108D6;0.291838!10593-108D8;0.924381!10590-108D5;0.13901!10026-101D8;0.59939!10096-102C6;0.0695049!10168-103B6;0.425513!10154-103A1;0.156975!10209-103G2;0.154246!10061-101H7;3.08445e-10!10027-101D9;1.13368e-06!10043-101F7;2.26766e-07!10783-110G9;2.0946e-10!10028-101E1;0.000748771!10060-101H6;1.1893e-12!10203-103F5;1.03764e-10!10059-101H5;5.66125e-11!10047-101G2;1.17875e-07!10029-101E2;4.12168e-21!10058-101H4;1.16368e-10!10418-106C4;3.89917e-06!10492-107B6;0.308299!10694-109G1;0.0114166!10797-110I5;3.50921e-06!10057-101H3;0.425787!10100-102D1;9.3908e-06!10055-101H1;0.00777501!10204-103F6;0.00507904!10191-103E2;0.000379731!10563-108A5;1.55831e-06
|name=CNhs11331_bl_f2
|name=CNhs11331_bl_f2
|tomtom_result=sna#MA0086.1;-4;2.56968e-05;0.0122317;0.0241054;6;GTGGCAGGTGAG;CAGGTG;+!ESR1#MA0112.2;0;7.77009e-05;0.0369856;0.0364445;12;GTGGCAGGTGAG;GGCCCAGGTCACCCTGACCT;+!ZEB1#MA0103.1;-4;0.0002269;0.108004;0.0709493;6;GTGGCAGGTGAG;CAGGTG;-!CBF1#MA0281.1;-3;0.00236961;1.12793;0.416149;8;GTGGCAGGTGAG;GCACGTGA;+!MAX#MA0058.1;-1;0.00269643;1.2835;0.416149;10;GTGGCAGGTGAG;AACCACGTGA;+!TYE7#MA0409.1;-4;0.00284699;1.35517;0.416149;7;GTGGCAGGTGAG;CACGTGA;+!YJL103C#MA0427.1;0;0.00315137;1.50005;0.416149;11;GTGGCAGGTGAG;AGCTCCGGAGA;+!h#MA0449.1;-2;0.0045675;2.17413;0.416149;10;GTGGCAGGTGAG;GGCACGTGCC;+!USF1#MA0093.1;-4;0.00478437;2.27736;0.416149;7;GTGGCAGGTGAG;CACGTGG;+!Mycn#MA0104.2;-2;0.00541502;2.57755;0.416149;10;GTGGCAGGTGAG;CGCACGTGGC;+!Myc#MA0147.1;-2;0.00640309;3.04787;0.416149;10;GTGGCAGGTGAG;CGCACGTGGC;+!Mycn#MA0104.2;-4;0.00641344;3.0528;0.416149;6;GTGGCAGGTGAG;CACGTG;-!YGR067C#MA0425.1;0;0.00775303;3.69044;0.416149;12;GTGGCAGGTGAG;TGAAAAAGTGGGGT;-!RXR::RAR_DR5#MA0159.1;6;0.00816258;3.88539;0.416149;11;GTGGCAGGTGAG;AGGTCATGGAGAGGTCA;+!Arnt#MA0004.1;-4;0.00831976;3.9602;0.416149;6;GTGGCAGGTGAG;CACGTG;+!INO4#MA0322.1;-3;0.0084778;4.03543;0.416149;9;GTGGCAGGTGAG;GCATGTGAA;+!Tal1::Gata1#MA0140.1;6;0.00959483;4.56714;0.428602;12;GTGGCAGGTGAG;CTGGTGGGGACAGATAAG;+!REI1#MA0364.1;-3;0.0122744;5.84262;0.458165;7;GTGGCAGGTGAG;TCAGGGG;-!ESR1#MA0112.2;-3;0.0124288;5.91613;0.458165;9;GTGGCAGGTGAG;CCAGGTCACCGTGACCCC;+!NHLH1#MA0048.1;-1;0.0130096;6.19255;0.458165;11;GTGGCAGGTGAG;ACGCAGCTGCGC;-!RTG3#MA0376.1;3;0.0135075;6.42956;0.458165;12;GTGGCAGGTGAG;ATATTAGCACGTGCTTAGTC;+!Esrrb#MA0141.1;1;0.0158621;7.55035;0.462005;11;GTGGCAGGTGAG;AGCTCAAGGTCA;+!INO2#MA0321.1;-3;0.0160533;7.64135;0.462005;9;GTGGCAGGTGAG;GCATGTGAA;+!Myb#MA0100.1;-2;0.0162527;7.73627;0.462005;8;GTGGCAGGTGAG;GGCCGTTG;+!PHO4#MA0357.1;-3;0.0162527;7.73627;0.462005;8;GTGGCAGGTGAG;GCACGTGC;+!HAC1#MA0310.1;-2;0.0199396;9.49126;0.535657;8;GTGGCAGGTGAG;GACACGTG;+
}}
}}

Latest revision as of 13:04, 7 September 2012

Full Name: CNhs11331_bl_f2

Motif matrix
POACGT
174.7462637261348198.2859328846454246.3388202109371266.0211306866517
2139.8964789598798368.93251704099588132.5955001000861143.96765140740723
343.140136040120005137.5239816162176246.3740941898170458.353935662214305
481.1823492271596167.70730074901846212.900341996906323.602155535284574
55.589696067914954476.76950130115930.76831008568996012.264640053605169
6430.720482820681870.00.054.67166468768757
70.51733416795175780.0484.874813340417750.0
80.020.95689523612032464.435252272249040.0
9209.216136094658340.01.7374373464929824274.4385740672175
1036.937102638779367.835393125376703437.61943965888923.00021208532407
11268.758448033632220.858377554316025108.2294395490184187.54588237140234
1247.04529880682812198.80139846021743230.779363666079558.766086575243596

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
sna#MA0086.1-42.56968e-050.01223170.02410546GTGGCAGGTGAGCAGGTG+
ESR1#MA0112.207.77009e-050.03698560.036444512GTGGCAGGTGAGGGCCCAGGTCACCCTGACCT+
ZEB1#MA0103.1-40.00022690.1080040.07094936GTGGCAGGTGAGCAGGTG-
CBF1#MA0281.1-30.002369611.127930.4161498GTGGCAGGTGAGGCACGTGA+
MAX#MA0058.1-10.002696431.28350.41614910GTGGCAGGTGAGAACCACGTGA+
TYE7#MA0409.1-40.002846991.355170.4161497GTGGCAGGTGAGCACGTGA+
YJL103C#MA0427.100.003151371.500050.41614911GTGGCAGGTGAGAGCTCCGGAGA+
h#MA0449.1-20.00456752.174130.41614910GTGGCAGGTGAGGGCACGTGCC+
USF1#MA0093.1-40.004784372.277360.4161497GTGGCAGGTGAGCACGTGG+
Mycn#MA0104.2-20.005415022.577550.41614910GTGGCAGGTGAGCGCACGTGGC+
Myc#MA0147.1-20.006403093.047870.41614910GTGGCAGGTGAGCGCACGTGGC+
Mycn#MA0104.2-40.006413443.05280.4161496GTGGCAGGTGAGCACGTG-
YGR067C#MA0425.100.007753033.690440.41614912GTGGCAGGTGAGTGAAAAAGTGGGGT-
RXR::RAR_DR5#MA0159.160.008162583.885390.41614911GTGGCAGGTGAGAGGTCATGGAGAGGTCA+
Arnt#MA0004.1-40.008319763.96020.4161496GTGGCAGGTGAGCACGTG+
INO4#MA0322.1-30.00847784.035430.4161499GTGGCAGGTGAGGCATGTGAA+
Tal1::Gata1#MA0140.160.009594834.567140.42860212GTGGCAGGTGAGCTGGTGGGGACAGATAAG+
REI1#MA0364.1-30.01227445.842620.4581657GTGGCAGGTGAGTCAGGGG-
ESR1#MA0112.2-30.01242885.916130.4581659GTGGCAGGTGAGCCAGGTCACCGTGACCCC+
NHLH1#MA0048.1-10.01300966.192550.45816511GTGGCAGGTGAGACGCAGCTGCGC-
RTG3#MA0376.130.01350756.429560.45816512GTGGCAGGTGAGATATTAGCACGTGCTTAGTC+
Esrrb#MA0141.110.01586217.550350.46200511GTGGCAGGTGAGAGCTCAAGGTCA+
INO2#MA0321.1-30.01605337.641350.4620059GTGGCAGGTGAGGCATGTGAA+
Myb#MA0100.1-20.01625277.736270.4620058GTGGCAGGTGAGGGCCGTTG+
PHO4#MA0357.1-30.01625277.736270.4620058GTGGCAGGTGAGGCACGTGC+
HAC1#MA0310.1-20.01993969.491260.5356578GTGGCAGGTGAGGACACGTG+
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