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MacroAPE 1083:Motif199: Difference between revisions

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!13231-141I9;0.190828!10696-109G3;0.225025!10493-107B7;0.760544!10494-107B8;0.11179!10850-111F4;0.882133!10851-111F5;0.816577!10852-111F6;0.345082!10853-111F7;0.112022!10854-111F8;0.20694!10855-111F9;0.38641!10856-111G1;0.173439!10847-111F1;0.172467!10846-111E9;0.192952!10848-111F2;0.351155!10845-111E8;0.474695!10857-111G2;0.155444!10858-111G3;0.427478!10156-103A3;0.271023!11901-125F2;0.499774!11902-125F3;0.165943!11903-125F4;0.121968!10689-109F5;0.142014!10648-109A9;0.728763!10784-110H1;0.403303!10744-110C6;0.0924557!10772-110F7;0.291956!10474-106I6;0.516544!10600-108E6;0.515776!10684-109E9;0.96045!12226-129F3;0.0308334!12227-129F4;0.12082!10508-107D4;0.206895!10539-107G8;0.319553!10607-108F4;0.12834!10555-107I6;0.158111!10774-110F9;0.145317!10637-108I7;0.171592!10663-109C6;0.203662!10728-110A8;0.285007!10729-110A9;0.156502!10430-106D7;0.618205!10730-110B1;0.0780388!10813-111B3;0.98103!10812-111B2;0.25031!10037-101F1;0.203275!10172-103C1;0.591888!10163-103B1;0.31909!10076-102A4;0.539279!10073-102A1;0.475389!10036-101E9;0.625447!10195-103E6;0.644417!10277-104E7;0.51786!10434-106E2;0.584618!10550-107I1;0.17728!10545-107H5;0.0971057!10544-107H4;0.390154!10704-109H2;0.467959!10510-107D6;0.700848!10558-107I9;0.781987!10020-101D2;0.434723!10732-110B3;0.570784!10049-101G4;0.109236!10698-109G5;0.117778!10437-106E5;0.385355!10417-106C3;0.249546!10035-101E8;0.053177!10171-103B9;0.604289!10157-103A4;0.361229!10034-101E7;0.4744!10072-101I9;0.633544!10199-103F1;0.553442!10200-103F2;0.202496!10697-109G4;0.60307!10723-110A3;0.31512!10179-103C8;0.153678!10160-103A7;0.407979!10180-103C9;0.274961!10162-103A9;0.520652!10021-101D3;0.749179!10840-111E3;0.483817!10706-109H4;0.366215!10033-101E6;0.659297!10032-101E5;0.698245!10490-107B4;0.584124!10439-106E7;0.160147!10022-101D4;0.075492!10176-103C5;0.993592!10469-106I1;0.472773!10067-101I4;0.0657233!10411-106B6;0.955937!10471-106I3;0.152442!10030-101E3;0.129989!10475-106I7;0.584383!10787-110H4;0.617357!10477-106I9;0.319681!10695-109G2;0.145561!11771-123I7;0.522228!11772-123I8;0.221035!11773-123I9;0.203583!10093-102C3;0.24604!10442-106F1;0.0567223!10442-106F1;0.211074!10201-103F3;0.196909!10639-108I9;0.755704!11843-124H7;0.0696906!11841-124H5;0.0861613!10693-109F9;0.195967!10436-106E4;0.0952604!10483-107A6;0.0447858!10282-104F3;0.111666!10023-101D5;0.19102!10066-101I3;0.211265!10065-101I2;0.257!10800-110I8;0.377256!10610-108F7;0.414685!10841-111E4;0.61383!10541-107H1;0.395935!10842-111E5;0.313768!10562-108A4;0.682605!10024-101D6;0.0466136!10064-101I1;0.0869061!10609-108F6;0.869526!10048-101G3;0.0178893!10781-110G7;0.432128!10181-103D1;0.0957415!10159-103A6;0.559331!10056-101H2;0.448688!10737-110B8;0.546419!10025-101D7;0.910308!10044-101F8;0.047679!10424-106D1;0.255508!10463-106H4;0.182346!10616-108G4;0.118426!10486-107A9;0.263228!10062-101H8;0.572178!10202-103F4;0.750516!10158-103A5;0.105504!10441-106E9;0.426052!10031-101E4;0.115847!10063-101H9;0.715916!10063-101H9;0.561404!11763-123H8;0.644168!11765-123I1;0.203431!11768-123I4;0.612605!10807-111A6;0.368838!10790-110H7;0.334775!10798-110I6;0.545781!10786-110H3;0.191621!10591-108D6;0.124529!10593-108D8;0.171748!10590-108D5;0.102446!10026-101D8;0.100767!10096-102C6;0.91293!10168-103B6;0.572021!10154-103A1;0.554303!10209-103G2;0.466932!10061-101H7;0.776807!10027-101D9;0.367586!10043-101F7;0.0830599!10783-110G9;0.0956517!10028-101E1;0.855907!10060-101H6;0.412541!10203-103F5;0.748479!10059-101H5;0.61189!10047-101G2;0.497599!10029-101E2;0.211522!10058-101H4;0.220298!10418-106C4;0.512186!10492-107B6;0.365345!10694-109G1;0.724077!10797-110I5;0.744749!10057-101H3;0.0747487!10100-102D1;0.666139!10055-101H1;0.602683!10204-103F6;0.570325!10191-103E2;0.796281!10563-108A5;0.302964
|name=motif199
|name=motif199
|tomtom_result=SP1#MA0079.2;-1;2.44313e-06;0.00116293;0.0022958;8;CCCCCTCCC;CCCCGCCCCC;+!Klf4#MA0039.2;0;1.54351e-05;0.0073471;0.00725217;9;CCCCCTCCC;GCCCCACCCA;-!YML081W#MA0431.1;0;6.47726e-05;0.0308317;0.0202889;9;CCCCCTCCC;ACCCCGCAC;+!YGR067C#MA0425.1;0;0.000207675;0.0988534;0.048788;9;CCCCCTCCC;ACCCCACTTTTTTG;+!MIG2#MA0338.1;-1;0.000444884;0.211765;0.0836114;7;CCCCCTCCC;CCCCGCA;+!MIG3#MA0339.1;-1;0.000647207;0.30807;0.0991095;7;CCCCCTCCC;CCCCGCA;+!SP1#MA0079.2;0;0.000738287;0.351424;0.0991095;9;CCCCCTCCC;ACCCCGCCCC;-!MSN4#MA0342.1;-1;0.00105312;0.501283;0.107959;5;CCCCCTCCC;CCCCT;-!RGM1#MA0366.1;-1;0.00105312;0.501283;0.107959;5;CCCCCTCCC;CCCCT;-!MZF1_5-13#MA0057.1;2;0.0013088;0.62299;0.107959;8;CCCCCTCCC;TTCCCCCTAC;-!MIG1#MA0337.1;0;0.00131743;0.627095;0.107959;7;CCCCCTCCC;CCCCCGC;+!MSN2#MA0341.1;-1;0.00137864;0.656232;0.107959;5;CCCCCTCCC;CCCCT;-!YPR022C#MA0436.1;-1;0.00150994;0.718734;0.109146;7;CCCCCTCCC;CCCCACG;+!RREB1#MA0073.1;10;0.00194321;0.92497;0.130431;9;CCCCCTCCC;CCCCAAACCACCCCCCCCCC;+!ADR1#MA0268.1;0;0.0034775;1.65529;0.217853;7;CCCCCTCCC;ACCCCAC;+!ZMS1#MA0441.1;1;0.00431531;2.05409;0.238693;8;CCCCCTCCC;TTCCCCGCA;+!SUT1#MA0399.1;-1;0.00431817;2.05545;0.238693;7;CCCCCTCCC;CCCCGCG;-!UGA3#MA0410.1;-1;0.0057173;2.72143;0.298474;8;CCCCCTCCC;TCCCGCCG;-!IXR1#MA0323.1;1;0.00627452;2.98667;0.300565;9;CCCCCTCCC;CCCCGCTTCCGGCTT;-!CHA4#MA0283.1;0;0.00663418;3.15787;0.300565;8;CCCCCTCCC;TCTCCGCC;-!btd#MA0443.1;-2;0.0067169;3.19725;0.300565;7;CCCCCTCCC;TCCGCCCCCT;-!INSM1#MA0155.1;2;0.00725634;3.45402;0.309944;9;CCCCCTCCC;CGCCCCCTGACA;-!Pax4#MA0068.1;20;0.00999187;4.75613;0.39996;9;CCCCCTCCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!RPN4#MA0373.1;-1;0.010215;4.86234;0.39996;7;CCCCCTCCC;CGCCACC;-!NHP10#MA0344.1;0;0.0127572;6.07244;0.479518;8;CCCCCTCCC;TCCCCGGC;-!GABPA#MA0062.2;0;0.0144816;6.89326;0.514358;9;CCCCCTCCC;GCCACTTCCGG;-!hkb#MA0450.1;-1;0.0147789;7.03474;0.514358;8;CCCCCTCCC;TCACGCCCC;-!Zfx#MA0146.1;3;0.0191198;9.10102;0.625813;9;CCCCCTCCC;CAGGCCTCGGCCCC;-!opa#MA0456.1;1;0.0193132;9.19308;0.625813;9;CCCCCTCCC;GACCCCCCGCTG;+!Macho-1#MA0118.1;-1;0.0208845;9.94101;0.654171;8;CCCCCTCCC;GAACCCCCA;-
}}
}}

Latest revision as of 12:58, 7 September 2012

Full Name: motif199

Motif matrix
POACGT
016762426523549217106
02010201200
03010201200
0467048146945229317
05010201200
062230403045749251
07010201200
08010201200
0948548605626448458

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.2-12.44313e-060.001162930.00229588CCCCCTCCCCCCCGCCCCC+
Klf4#MA0039.201.54351e-050.00734710.007252179CCCCCTCCCGCCCCACCCA-
YML081W#MA0431.106.47726e-050.03083170.02028899CCCCCTCCCACCCCGCAC+
YGR067C#MA0425.100.0002076750.09885340.0487889CCCCCTCCCACCCCACTTTTTTG+
MIG2#MA0338.1-10.0004448840.2117650.08361147CCCCCTCCCCCCCGCA+
MIG3#MA0339.1-10.0006472070.308070.09910957CCCCCTCCCCCCCGCA+
SP1#MA0079.200.0007382870.3514240.09910959CCCCCTCCCACCCCGCCCC-
MSN4#MA0342.1-10.001053120.5012830.1079595CCCCCTCCCCCCCT-
RGM1#MA0366.1-10.001053120.5012830.1079595CCCCCTCCCCCCCT-
MZF1_5-13#MA0057.120.00130880.622990.1079598CCCCCTCCCTTCCCCCTAC-
MIG1#MA0337.100.001317430.6270950.1079597CCCCCTCCCCCCCCGC+
MSN2#MA0341.1-10.001378640.6562320.1079595CCCCCTCCCCCCCT-
YPR022C#MA0436.1-10.001509940.7187340.1091467CCCCCTCCCCCCCACG+
RREB1#MA0073.1100.001943210.924970.1304319CCCCCTCCCCCCCAAACCACCCCCCCCCC+
ADR1#MA0268.100.00347751.655290.2178537CCCCCTCCCACCCCAC+
ZMS1#MA0441.110.004315312.054090.2386938CCCCCTCCCTTCCCCGCA+
SUT1#MA0399.1-10.004318172.055450.2386937CCCCCTCCCCCCCGCG-
UGA3#MA0410.1-10.00571732.721430.2984748CCCCCTCCCTCCCGCCG-
IXR1#MA0323.110.006274522.986670.3005659CCCCCTCCCCCCCGCTTCCGGCTT-
CHA4#MA0283.100.006634183.157870.3005658CCCCCTCCCTCTCCGCC-
btd#MA0443.1-20.00671693.197250.3005657CCCCCTCCCTCCGCCCCCT-
INSM1#MA0155.120.007256343.454020.3099449CCCCCTCCCCGCCCCCTGACA-
Pax4#MA0068.1200.009991874.756130.399969CCCCCTCCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
RPN4#MA0373.1-10.0102154.862340.399967CCCCCTCCCCGCCACC-
NHP10#MA0344.100.01275726.072440.4795188CCCCCTCCCTCCCCGGC-
GABPA#MA0062.200.01448166.893260.5143589CCCCCTCCCGCCACTTCCGG-
hkb#MA0450.1-10.01477897.034740.5143588CCCCCTCCCTCACGCCCC-
Zfx#MA0146.130.01911989.101020.6258139CCCCCTCCCCAGGCCTCGGCCCC-
opa#MA0456.110.01931329.193080.6258139CCCCCTCCCGACCCCCCGCTG+
Macho-1#MA0118.1-10.02088459.941010.6541718CCCCCTCCCGAACCCCCA-
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