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MacroAPE 1083:Motif CTANGG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;208;0;0!02;0;0;0;208!03;208;0;0;0!04;52;52;52;52!05;0;0;208;0!06;0;0;208;0 |macroape_1083_sample_pvalues=11376-118A8;0.710917!11327-117E...")
 
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52677!10850-111F4;0.700284!10851-111F5;0.916681!10852-111F6;0.595961!10853-111F7;0.668845!10854-111F8;0.672185!10855-111F9;0.817716!10856-111G1;0.684829!10847-111F1;0.899019!10846-111E9;0.706748!10848-111F2;0.772271!10845-111E8;0.391694!10857-111G2;0.755187!10858-111G3;0.583167!10156-103A3;0.839433!11901-125F2;0.712353!11902-125F3;0.178259!11903-125F4;0.167872!10689-109F5;0.214732!10648-109A9;0.154236!10784-110H1;0.57681!10744-110C6;0.872651!10772-110F7;0.789075!10474-106I6;0.338867!10600-108E6;0.977369!10684-109E9;0.623606!12226-129F3;0.550051!12227-129F4;0.87558!10508-107D4;0.530356!10539-107G8;0.775104!10607-108F4;0.823775!10555-107I6;0.836056!10774-110F9;0.888297!10637-108I7;0.402694!10663-109C6;0.438273!10728-110A8;0.733693!10729-110A9;0.353573!10430-106D7;0.743747!10730-110B1;0.753493!10813-111B3;0.887138!10812-111B2;0.453259!10037-101F1;0.521569!10172-103C1;0.556734!10163-103B1;0.756899!10076-102A4;0.694869!10073-102A1;0.523229!10036-101E9;0.66518!10195-103E6;0.491857!10277-104E7;0.62413!10434-106E2;0.675101!10550-107I1;0.173239!10545-107H5;0.369073!10544-107H4;0.630415!10704-109H2;0.510739!10510-107D6;0.519194!10558-107I9;0.483694!10020-101D2;0.994232!10732-110B3;0.814807!10049-101G4;0.944378!10698-109G5;0.882425!10437-106E5;0.321909!10417-106C3;0.0345544!10035-101E8;0.513376!10171-103B9;0.516142!10157-103A4;0.74533!10034-101E7;0.691028!10072-101I9;0.576479!10199-103F1;0.860666!10200-103F2;0.730953!10697-109G4;0.63419!10723-110A3;0.649573!10179-103C8;0.582986!10160-103A7;0.590223!10180-103C9;0.706145!10162-103A9;0.988032!10021-101D3;0.992736!10840-111E3;0.579848!10706-109H4;0.979227!10033-101E6;0.575158!10032-101E5;0.538901!10490-107B4;0.539825!10439-106E7;0.441194!10022-101D4;0.336548!10176-103C5;0.835395!10469-106I1;0.725613!10067-101I4;0.830848!10411-106B6;0.477472!10471-106I3;0.730947!10030-101E3;0.950955!10475-106I7;0.436485!10787-110H4;0.783687!10477-106I9;0.448761!10695-109G2;0.765601!11771-123I7;0.724947!11772-123I8;0.967905!11773-123I9;0.311516!10093-102C3;0.390875!10442-106F1;0.928875!10442-106F1;0.870209!10201-103F3;0.91727!10639-108I9;0.883556!11843-124H7;0.921906!11841-124H5;0.998069!10693-109F9;0.318261!10436-106E4;0.488285!10483-107A6;0.379516!10282-104F3;0.511045!10023-101D5;0.826516!10066-101I3;0.577777!10065-101I2;0.446328!10800-110I8;0.471442!10610-108F7;0.756804!10841-111E4;0.888213!10541-107H1;0.712568!10842-111E5;0.464461!10562-108A4;0.919656!10024-101D6;0.698805!10064-101I1;0.944484!10609-108F6;0.541387!10048-101G3;0.965795!10781-110G7;0.875463!10181-103D1;0.750477!10159-103A6;0.638001!10056-101H2;0.662641!10737-110B8;0.408424!10025-101D7;0.863156!10044-101F8;0.737297!10424-106D1;0.478876!10463-106H4;0.929161!10616-108G4;0.399305!10486-107A9;0.50347!10062-101H8;0.505025!10202-103F4;0.73735!10158-103A5;0.744338!10441-106E9;0.575294!10031-101E4;0.779727!10063-101H9;0.472229!10063-101H9;0.698287!11763-123H8;0.643371!11765-123I1;0.734971!11768-123I4;0.56108!10807-111A6;0.520184!10790-110H7;0.263036!10798-110I6;0.526328!10786-110H3;0.918639!10591-108D6;0.86746!10593-108D8;0.735141!10590-108D5;0.577386!10026-101D8;0.539524!10096-102C6;0.78987!10168-103B6;0.396985!10154-103A1;0.620812!10209-103G2;0.643776!10061-101H7;0.663152!10027-101D9;0.578632!10043-101F7;0.621195!10783-110G9;0.955241!10028-101E1;0.393696!10060-101H6;0.753674!10203-103F5;0.968538!10059-101H5;0.78381!10047-101G2;0.628773!10029-101E2;0.769899!10058-101H4;0.956784!10418-106C4;0.528359!10492-107B6;0.459271!10694-109G1;0.473722!10797-110I5;0.78965!10057-101H3;0.838727!10100-102D1;0.480678!10055-101H1;0.992044!10204-103F6;0.653269!10191-103E2;0.976535!10563-108A5;0.549226
|name=motif_CTANGG
|name=motif_CTANGG
|tomtom_result=Zfp423#MA0116.1;5;0.00616837;2.93615;1;6;CTAAGG;GGCACCCAGGGGTGC;+!TBF1#MA0403.1;0;0.00906772;4.31624;1;6;CTAAGG;TTAGGGTT;-!PLAG1#MA0163.1;4;0.018605;8.85597;1;6;CTAAGG;CCCCCTTGGGCCCC;-
}}
}}

Latest revision as of 12:58, 7 September 2012

Full Name: motif_CTANGG

Motif matrix
POACGT
01020800
02000208
03208000
0452525252
05002080
06002080

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Zfp423#MA0116.150.006168372.9361516CTAAGGGGCACCCAGGGGTGC+
TBF1#MA0403.100.009067724.3162416CTAAGGTTAGGGTT-
PLAG1#MA0163.140.0186058.8559716CTAAGGCCCCCTTGGGCCCC-
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