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MacroAPE 1083:Motif CTAGNG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;240;0;0!02;0;0;0;240!03;240;0;0;0!04;0;0;240;0!05;60;60;60;60!06;0;0;240;0 |macroape_1083_sample_pvalues=11376-118A8;0.735302!11327-117E...")
 
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493-107B7;0.759415!10494-107B8;0.983668!10850-111F4;0.65307!10851-111F5;0.634686!10852-111F6;0.65548!10853-111F7;0.422193!10854-111F8;0.677974!10855-111F9;0.682109!10856-111G1;0.479687!10847-111F1;0.401104!10846-111E9;0.692983!10848-111F2;0.602516!10845-111E8;0.644756!10857-111G2;0.855364!10858-111G3;0.812807!10156-103A3;0.565687!11901-125F2;0.715901!11902-125F3;0.584631!11903-125F4;0.515938!10689-109F5;0.405687!10648-109A9;0.617731!10784-110H1;0.522007!10744-110C6;0.617073!10772-110F7;0.960069!10474-106I6;0.762579!10600-108E6;0.0595981!10684-109E9;0.809213!12226-129F3;0.27873!12227-129F4;0.572108!10508-107D4;0.974448!10539-107G8;0.24745!10607-108F4;0.508561!10555-107I6;0.100748!10774-110F9;0.228516!10637-108I7;0.0508513!10663-109C6;0.0451215!10728-110A8;0.155634!10729-110A9;0.0117835!10430-106D7;0.868568!10730-110B1;0.871963!10813-111B3;0.352584!10812-111B2;0.469937!10037-101F1;0.815801!10172-103C1;0.745241!10163-103B1;0.837652!10076-102A4;0.721371!10073-102A1;0.966379!10036-101E9;0.416566!10195-103E6;0.776484!10277-104E7;0.795911!10434-106E2;0.700027!10550-107I1;0.406704!10545-107H5;0.996905!10544-107H4;0.672704!10704-109H2;0.684741!10510-107D6;0.250148!10558-107I9;0.416624!10020-101D2;0.118379!10732-110B3;0.744061!10049-101G4;0.275828!10698-109G5;0.810229!10437-106E5;0.638222!10417-106C3;0.642498!10035-101E8;0.71408!10171-103B9;0.768572!10157-103A4;0.759601!10034-101E7;0.705083!10072-101I9;0.789394!10199-103F1;0.36387!10200-103F2;0.898783!10697-109G4;0.629889!10723-110A3;0.426345!10179-103C8;0.65817!10160-103A7;0.80841!10180-103C9;0.866411!10162-103A9;0.996284!10021-101D3;0.905273!10840-111E3;0.929049!10706-109H4;0.660367!10033-101E6;0.611274!10032-101E5;0.881589!10490-107B4;0.795566!10439-106E7;0.657071!10022-101D4;0.300018!10176-103C5;0.658596!10469-106I1;0.577719!10067-101I4;0.50733!10411-106B6;0.654932!10471-106I3;0.425195!10030-101E3;0.915258!10475-106I7;0.978796!10787-110H4;0.329897!10477-106I9;0.539682!10695-109G2;0.870878!11771-123I7;0.807161!11772-123I8;0.694491!11773-123I9;0.579572!10093-102C3;0.678295!10442-106F1;0.615857!10442-106F1;0.389789!10201-103F3;0.355746!10639-108I9;0.841157!11843-124H7;0.872378!11841-124H5;0.339076!10693-109F9;0.322247!10436-106E4;0.359408!10483-107A6;0.744563!10282-104F3;0.761279!10023-101D5;0.137653!10066-101I3;0.268008!10065-101I2;0.68757!10800-110I8;0.768047!10610-108F7;0.943158!10841-111E4;0.700574!10541-107H1;0.272889!10842-111E5;0.827184!10562-108A4;0.163995!10024-101D6;0.59225!10064-101I1;0.948415!10609-108F6;0.501278!10048-101G3;0.325945!10781-110G7;0.778016!10181-103D1;0.811275!10159-103A6;0.766431!10056-101H2;0.670103!10737-110B8;0.998069!10025-101D7;0.783611!10044-101F8;0.49401!10424-106D1;0.614795!10463-106H4;0.954437!10616-108G4;0.740377!10486-107A9;0.133731!10062-101H8;0.933158!10202-103F4;0.851833!10158-103A5;0.912537!10441-106E9;0.805268!10031-101E4;0.42552!10063-101H9;0.854529!10063-101H9;0.339753!11763-123H8;0.843797!11765-123I1;0.728276!11768-123I4;0.771015!10807-111A6;0.856848!10790-110H7;0.909887!10798-110I6;0.666925!10786-110H3;0.729675!10591-108D6;0.836245!10593-108D8;0.974779!10590-108D5;0.597976!10026-101D8;0.735607!10096-102C6;0.812935!10168-103B6;0.302281!10154-103A1;0.873251!10209-103G2;0.853469!10061-101H7;0.538962!10027-101D9;0.927128!10043-101F7;0.102589!10783-110G9;0.235015!10028-101E1;0.143436!10060-101H6;0.735768!10203-103F5;0.711244!10059-101H5;0.61081!10047-101G2;0.766062!10029-101E2;0.642826!10058-101H4;0.867051!10418-106C4;0.815525!10492-107B6;0.972589!10694-109G1;0.85508!10797-110I5;0.851583!10057-101H3;0.840895!10100-102D1;0.65652!10055-101H1;0.727592!10204-103F6;0.656084!10191-103E2;0.656691!10563-108A5;0.772265
|name=motif_CTAGNG
|name=motif_CTAGNG
|tomtom_result=ABF2#MA0266.1;1;0.00136024;0.647472;1;6;CTAGAG;TCTAGAG;-!STP3#MA0396.1;1;0.00372239;1.77186;1;6;CTAGAG;GCTAGCGCA;+!kni#MA0451.1;3;0.00679038;3.23222;1;6;CTAGAG;AAACTAGAGCAC;+!TBF1#MA0403.1;0;0.00906772;4.31624;1;6;CTAGAG;TTAGGGTT;-!STP4#MA0397.1;1;0.010152;4.83234;1;6;CTAGAG;GATAGCGCA;+!EBF1#MA0154.1;3;0.0155357;7.39498;1;6;CTAGAG;TCCCTTGGGT;-
}}
}}

Latest revision as of 12:44, 7 September 2012

Full Name: motif_CTAGNG

Motif matrix
POACGT
01024000
02000240
03240000
04002400
0560606060
06002400

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ABF2#MA0266.110.001360240.64747216CTAGAGTCTAGAG-
STP3#MA0396.110.003722391.7718616CTAGAGGCTAGCGCA+
kni#MA0451.130.006790383.2322216CTAGAGAAACTAGAGCAC+
TBF1#MA0403.100.009067724.3162416CTAGAGTTAGGGTT-
STP4#MA0397.110.0101524.8323416CTAGAGGATAGCGCA+
EBF1#MA0154.130.01553577.3949816CTAGAGTCCCTTGGGT-
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