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MacroAPE 1083:CNhs11822 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;10.10874497016085;375.04612799041183;129.9936219458243;192.72404646664194!2;61.5174228179226;214.01883834559058;12.07961584477868;420.256664...")
 
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10455-106G5;0.0871752!10534-107G3;0.0574321!10429-106D6;0.00895207!10464-106H5;0.464361!10827-111C8;0.0726863!10789-110H6;0.397127!10828-111C9;0.924038!10788-110H5;0.911456!10792-110H9;0.1282!10765-110E9;0.237247!10829-111D1;0.137375!10830-111D2;0.0504621!10831-111D3;0.779047!10832-111D4;0.547879!10833-111D5;0.078711!10764-110E8;0.0814761!10770-110F5;0.628523!10399-106A3;0.468817!10400-106A4;0.0965305!10405-106A9;0.0964446!10834-111D6;0.0997753!10835-111D7;0.21733!10836-111D8;0.00368386!10837-111D9;0.339035!10699-109G6;0.542401!10802-111A1;0.3678!10796-110I4;0.342673!10010-101C1;0.0161797!10810-111A9;0.0120843!10421-106C7;0.0064881!10708-109H6;0.164254!12235-129G3;0.00150105!12236-129G4;0.258354!12237-129G5;0.867378!10167-103B5;0.481782!10151-102I7;0.685379!10428-106D5;0.391546!10795-110I3;0.758314!10805-111A4;0.331769!10052-101G7;0.0036315!10189-103D9;0.00940781!10589-108D4;0.00426235!10425-106D2;0.00708326!10427-106D4;0.114521!10702-109G9;0.215275!10432-106D9;0.271848!10496-107C1;0.139618!10718-109I7;0.631703!10011-101C2;0.0859598!10053-101G8;0.00721438!10686-109F2;0.00220795!10084-102B3;0.703047!10012-101C3;0.47224!10085-102B4;0.384607!10482-107A5;0.889406!10419-106C5;0.503418!10080-102A8;0.0762682!10760-110E4;0.0141394!10709-109H7;0.105008!10710-109H8;0.0426062!10703-109H1;0.673875!10719-109I8;0.0102603!10642-109A3;0.00316968!10177-103C6;0.0682987!10164-103B2;0.56141!10173-103C2;0.447591!10166-103B4;0.782332!10083-102B2;0.582565!10188-103D8;0.577644!10552-107I3;0.297186!10553-107I4;0.00693826!10013-101C4;0.160314!10536-107G5;0.00863566!10618-108G6;0.0678539!10423-106C9;0.0523873!10785-110H2;0.0135347!12238-129G6;0.104697!12239-129G7;0.017467!12240-129G8;0.371729!10416-106C2;0.0293352!10801-110I9;0.150834!10766-110F1;0.244357!10824-111C5;0.65911!10825-111C6;0.00657362!10826-111C7;0.0082369!10454-106G4;0.0210006!10409-106B4;0.00388206!10638-108I8;0.302918!10636-108I6;0.0733402!10513-107D9;0.10459!10420-106C6;0.0286841!10082-102B1;0.00136376!10014-101C5;0.104634!10070-101I7;0.01378!10452-106G2;0.022149!10453-106G3;0.156821!10449-106F8;0.14008!10042-101F6;0.125062!10069-101I6;0.300776!10193-103E4;0.220926!10631-108I1;0.529467!10438-106E6;0.0339214!10488-107B2;0.310916!10196-103E7;0.00491254!10071-101I8;0.0162858!10071-101I8;0.0250668!10041-101F5;0.858981!10451-106G1;0.00333857!10450-106F9;0.0200419!10604-108F1;0.0232202!10605-108F2;0.385173!10606-108F3;0.116382!10603-108E9;0.322514!10497-107C2;0.284845!10448-106F7;0.585083!10643-109A4;0.00428102!10426-106D3;0.21262!10431-106D8;0.245438!10197-103E8;0.0665927!10443-106F2;0.0178918!10815-111B5;0.00211063!10816-111B6;0.0159458!10817-111B7;0.0247518!10015-101C6;0.0197626!10410-106B5;0.00426427!10054-101G9;0.0186431!10758-110E2;0.468461!10711-109H9;0.0994905!10040-101F4;0.0361331!10470-106I2;0.485403!10415-106C1;0.0826063!10198-103E9;0.233786!10614-108G2;0.00904911!10612-108F9;0.13111!10549-107H9;0.118192!10615-108G3;0.0312327!10487-107B1;0.0255117!10433-106E1;0.0101547!10688-109F4;0.513513!10444-106F3;0.605506!10444-106F3;0.239383!10485-107A8;0.31323!10413-106B8;0.111636!10175-103C4;0.141187!10161-103A8;0.476795!12131-128D7;0.227212!10624-108H3;0.174878!10712-109I1;0.32424!10205-103F7;0.456627!10206-103F8;0.0791201!10207-103F9;0.082103!10050-101G5;0.00127872!10051-101G6;0.170331!10016-101C7;0.22666!10046-101G1;0.0183525!10778-110G4;0.171826!10633-108I3;0.301596!10818-111B8;0.123336!10819-111B9;0.0321933!10820-111C1;0.0327575!10484-107A7;0.0304699!10808-111A7;0.0113896!10169-103B7;0.132286!10153-102I9;0.565907!13425-144D5;0.368383!13433-144E4;0.111106!13437-144E8;0.0758485!11904-125F5;0.0494817!11905-125F6;0.349903!10039-101F3;0.411129!10791-110H8;0.462621!10017-101C8;0.20136!10045-101F9;0.00441612!10509-107D5;0.123581!10839-111E2;0.0318992!10692-109F8;0.0766031!10079-102A7;0.0117619!10078-102A6;0.0305642!10721-110A1;0.24827!10569-108B2;0.00261602!10570-108B3;0.93722!10571-108B4;0.686321!10647-109A8;0.784085!10752-110D5;0.00287142!10782-110G8;0.655239!10726-110A6;0.180892!10018-101C9;0.117795!10086-102B5;0.260309!10182-103D2;0.583122!10165-103B3;0.528556!10499-107C4;0.374237!10408-106B3;0.428841!10019-101D1;0.248955!10068-101I5;0.00468685!10075-102A3;0.0105815!10077-102A5;0.00768425!10727-110A7;0.000242542!10775-110G1;0.186567!10412-106B7;0.416545!12231-129F8;0.46238!12232-129F9;0.338313!12233-129G1;0.104751!12234-129G2;0.304692!10414-106B9;0.59837!10170-103B8;0.0342962!10183-103D3;0.77465!10150-102I6;0.623279!10174-103C3;0.381845!10155-103A2;0.580675!10038-101F2;0.212151!10838-111E1;0.253859!10759-110E3;0.00248224!10514-107E1;0.223388!10465-106H6;0.230643!10691-109F7;0.0865495!10843-111E6;0.244455!10844-111E7;0.0487473!11747-123G1;0.00926652!11748-123G2;0.28804!11749-123G3;0.739702!11750-123G4;0.652066!11751-123G5;0.5568!11840-124H4;0.501596!11752-123G6;0.929864!11753-123G7;0.968001!11754-123G8;0.489558!11755-123G9;0.544073!11756-123H1;0.831203!11833-124G6;0.953748!11760-123H5;0.856019!11836-124G9;0.835593!11758-123H3;0.944315!11835-124G8;0.637838!11762-123H7;0.182419!11838-124H2;0.887597!11757-123H2;0.492283!11759-123H4;0.194097!11761-123H6;0.586004!11842-124H6;0.397875!11837-124H1;0.922199!10568-108B1;0.0680872!13230-141I8;0.00209801!13231-141I9;0.668773!10696-109G3;0.675844!10493-107B7;0.892198!10494-107B8;0.117146!10850-111F4;0.181678!10851-111F5;0.0223562!10852-111F6;0.00322876!10853-111F7;0.194343!10854-111F8;0.00251143!10855-111F9;0.00215072!10856-111G1;0.362664!10847-111F1;0.0213696!10846-111E9;0.326204!10848-111F2;0.016641!10845-111E8;0.0718532!10857-111G2;0.420526!10858-111G3;0.0216386!10156-103A3;0.0303867!11901-125F2;0.376596!11902-125F3;0.857427!11903-125F4;0.682146!10689-109F5;0.609092!10648-109A9;0.00534938!10784-110H1;0.00281772!10744-110C6;0.414757!10772-110F7;0.23953!10474-106I6;0.109484!10600-108E6;0.0124178!10684-109E9;0.0789322!12226-129F3;0.17699!12227-129F4;0.288314!10508-107D4;0.244996!10539-107G8;0.0455359!10607-108F4;0.00131484!10555-107I6;0.00845661!10774-110F9;0.0196431!10637-108I7;0.00504188!10663-109C6;0.000733197!10728-110A8;0.00567434!10729-110A9;0.015225!10430-106D7;0.403111!10730-110B1;0.00973431!10813-111B3;0.00866666!10812-111B2;0.918338!10037-101F1;0.493069!10172-103C1;0.427735!10163-103B1;0.784315!10076-102A4;0.316621!10073-102A1;0.480825!10036-101E9;0.789818!10195-103E6;0.468479!10277-104E7;0.461949!10434-106E2;0.305!10550-107I1;0.129825!10545-107H5;0.0282011!10544-107H4;0.158538!10704-109H2;0.187498!10510-107D6;0.106937!10558-107I9;0.890087!10020-101D2;0.0897416!10732-110B3;0.0397113!10049-101G4;0.0105828!10698-109G5;0.421992!10437-106E5;0.0310279!10417-106C3;0.144195!10035-101E8;0.479176!10171-103B9;0.456287!10157-103A4;0.721956!10034-101E7;0.377643!10072-101I9;0.465284!10199-103F1;0.625156!10200-103F2;0.0022156!10697-109G4;0.0374712!10723-110A3;0.0170242!10179-103C8;0.460034!10160-103A7;0.708267!10180-103C9;0.670923!10162-103A9;0.924384!10021-101D3;0.676488!10840-111E3;0.0041544!10706-109H4;0.150502!10033-101E6;0.0714257!10032-101E5;0.420654!10490-107B4;0.490829!10439-106E7;0.0039498!10022-101D4;0.0135214!10176-103C5;0.00697198!10469-106I1;0.529452!10067-101I4;0.0366552!10411-106B6;0.272052!10471-106I3;0.949226!10030-101E3;0.0134471!10475-106I7;0.161757!10787-110H4;0.00226617!10477-106I9;0.00019617!10695-109G2;0.110646!11771-123I7;0.279418!11772-123I8;0.398039!11773-123I9;0.4309!10093-102C3;0.5391!10442-106F1;0.00283348!10442-106F1;0.00698559!10201-103F3;0.00929139!10639-108I9;0.0252922!11843-124H7;0.554263!11841-124H5;0.000463324!10693-109F9;0.0021902!10436-106E4;0.190166!10483-107A6;0.0520699!10282-104F3;0.368543!10023-101D5;0.957004!10066-101I3;0.397383!10065-101I2;0.695004!10800-110I8;0.0655514!10610-108F7;0.0860287!10841-111E4;0.0121029!10541-107H1;0.00299197!10842-111E5;0.153408!10562-108A4;0.00450915!10024-101D6;0.195035!10064-101I1;0.000504045!10609-108F6;0.0774923!10048-101G3;0.245569!10781-110G7;0.0412449!10181-103D1;0.221018!10159-103A6;0.395976!10056-101H2;0.19613!10737-110B8;0.577616!10025-101D7;0.348972!10044-101F8;0.00070651!10424-106D1;0.0017172!10463-106H4;0.135209!10616-108G4;0.470747!10486-107A9;0.337689!10062-101H8;0.0192181!10202-103F4;0.0228232!10158-103A5;0.000603763!10441-106E9;0.203207!10031-101E4;0.0618618!10063-101H9;0.461647!10063-101H9;0.88961!11763-123H8;0.0351601!11765-123I1;0.890354!11768-123I4;0.909966!10807-111A6;0.441165!10790-110H7;0.069322!10798-110I6;0.0300571!10786-110H3;0.0785842!10591-108D6;0.232254!10593-108D8;0.0742499!10590-108D5;0.292297!10026-101D8;0.0293785!10096-102C6;0.843306!10168-103B6;0.0047053!10154-103A1;0.649692!10209-103G2;0.33557!10061-101H7;0.0261989!10027-101D9;0.135641!10043-101F7;0.0172512!10783-110G9;0.00289621!10028-101E1;0.0371275!10060-101H6;0.0504506!10203-103F5;0.079276!10059-101H5;0.0280661!10047-101G2;0.348179!10029-101E2;0.00226558!10058-101H4;0.000446329!10418-106C4;0.0433378!10492-107B6;0.0501354!10694-109G1;0.0223002!10797-110I5;0.989177!10057-101H3;0.952366!10100-102D1;0.0195054!10055-101H1;0.0180205!10204-103F6;0.0828561!10191-103E2;0.00558203!10563-108A5;0.0020575
|name=CNhs11822_bl_f1
|name=CNhs11822_bl_f1
|tomtom_result=ELF5#MA0136.1;-1;0.00032173;0.153143;0.306287;9;CTCTCTCCTCCT;TACTTCCTT;+!FEV#MA0156.1;-2;0.00437708;2.08349;1;8;CTCTCTCCTCCT;ATTTCCTG;-!Klf4#MA0039.1;-2;0.00469901;2.23673;1;10;CTCTCTCCTCCT;CCTTCCTTTA;-!ETS1#MA0098.1;-3;0.00533058;2.53736;1;6;CTCTCTCCTCCT;CTTCCG;+!id1#MA0120.1;-1;0.00612357;2.91482;1;11;CTCTCTCCTCCT;TTTTCCTTTTCG;+!YRR1#MA0439.1;1;0.00908164;4.32286;1;10;CTCTCTCCTCCT;CTTATCTCCGC;+!AZF1#MA0277.1;-3;0.00925668;4.40618;1;9;CTCTCTCCTCCT;TTTCTTTTT;-!SPIB#MA0081.1;-4;0.0100632;4.79009;1;7;CTCTCTCCTCCT;TTCCTCT;-!ELK1#MA0028.1;-3;0.0107222;5.10378;1;9;CTCTCTCCTCCT;CTTCCGGCTC;-!SPI1#MA0080.2;-2;0.0113908;5.42203;1;7;CTCTCTCCTCCT;ACTTCCT;-!HMG-I/Y#MA0045.1;0;0.0149843;7.13253;1;12;CTCTCTCCTCCT;GTTTTTCCATTTGTTG;-!YKL222C#MA0428.1;-2;0.015347;7.30518;1;9;CTCTCTCCTCCT;ATTTCCGTT;-!CHA4#MA0283.1;-3;0.0188365;8.9662;1;8;CTCTCTCCTCCT;TCTCCGCC;-
}}
}}

Latest revision as of 12:38, 7 September 2012

Full Name: CNhs11822_bl_f1

Motif matrix
POACGT
110.10874497016085375.04612799041183129.9936219458243192.72404646664194
261.5174228179226214.0188383455905812.07961584477868420.25666436474694
3183.88851212034135238.75009166307822114.61395945525122170.61997813436804
416.026214952383103176.2431780727235720.875491682584805494.72765666534747
513.91433117273535364.372346462235441.9485375875037718327.63732615056443
60.05.449525127193715515.901483105868774686.5215331399759
721.239279071004447668.78668940942098.5834001562069529.263172736405982
849.67156554478495583.77065923147027.57424930134412566.85606729543946
947.086936044020340.75327421832535620.0660.0323311106928
1028.05295959666535249.70089335070955207.4769227515671222.64176567409692
11113.4233175975275351.910324133869932.59892688300605209.93997275863575
1285.17307204051669198.036921965355320.816363661180688403.84618370598605

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ELF5#MA0136.1-10.000321730.1531430.3062879CTCTCTCCTCCTTACTTCCTT+
FEV#MA0156.1-20.004377082.0834918CTCTCTCCTCCTATTTCCTG-
Klf4#MA0039.1-20.004699012.23673110CTCTCTCCTCCTCCTTCCTTTA-
ETS1#MA0098.1-30.005330582.5373616CTCTCTCCTCCTCTTCCG+
id1#MA0120.1-10.006123572.91482111CTCTCTCCTCCTTTTTCCTTTTCG+
YRR1#MA0439.110.009081644.32286110CTCTCTCCTCCTCTTATCTCCGC+
AZF1#MA0277.1-30.009256684.4061819CTCTCTCCTCCTTTTCTTTTT-
SPIB#MA0081.1-40.01006324.7900917CTCTCTCCTCCTTTCCTCT-
ELK1#MA0028.1-30.01072225.1037819CTCTCTCCTCCTCTTCCGGCTC-
SPI1#MA0080.2-20.01139085.4220317CTCTCTCCTCCTACTTCCT-
HMG-I/Y#MA0045.100.01498437.13253112CTCTCTCCTCCTGTTTTTCCATTTGTTG-
YKL222C#MA0428.1-20.0153477.3051819CTCTCTCCTCCTATTTCCGTT-
CHA4#MA0283.1-30.01883658.966218CTCTCTCCTCCTTCTCCGCC-
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