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MacroAPE 1083:Motif TAGCNG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;2080!02;2080;0;0;0!03;0;0;2080;0!04;0;2080;0;0!05;520;520;520;520!06;0;0;2080;0 |macroape_1083_sample_pvalues=11376-118A8;0.916804!1...")
 
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01!10828-111C9;0.958961!10788-110H5;0.799024!10792-110H9;0.647884!10765-110E9;0.74836!10829-111D1;0.925969!10830-111D2;0.926945!10831-111D3;0.953745!10832-111D4;0.89155!10833-111D5;0.980025!10764-110E8;0.936075!10770-110F5;0.822259!10399-106A3;0.896439!10400-106A4;0.440497!10405-106A9;0.400765!10834-111D6;0.330641!10835-111D7;0.713982!10836-111D8;0.671382!10837-111D9;0.929342!10699-109G6;0.838638!10802-111A1;0.549489!10796-110I4;0.864582!10010-101C1;0.596956!10810-111A9;0.534946!10421-106C7;0.714308!10708-109H6;0.727536!12235-129G3;0.35088!12236-129G4;0.550746!12237-129G5;0.949784!10167-103B5;0.576455!10151-102I7;0.71819!10428-106D5;0.749446!10795-110I3;0.422948!10805-111A4;0.922384!10052-101G7;0.724792!10189-103D9;0.851043!10589-108D4;0.611227!10425-106D2;0.750095!10427-106D4;0.314436!10702-109G9;0.690914!10432-106D9;0.961271!10496-107C1;0.40187!10718-109I7;0.490344!10011-101C2;0.930813!10053-101G8;0.801709!10686-109F2;0.624155!10084-102B3;0.719984!10012-101C3;0.865817!10085-102B4;0.798879!10482-107A5;0.527071!10419-106C5;0.581602!10080-102A8;0.646543!10760-110E4;0.559121!10709-109H7;0.54801!10710-109H8;0.398925!10703-109H1;0.806497!10719-109I8;0.484333!10642-109A3;0.675897!10177-103C6;0.504881!10164-103B2;0.759081!10173-103C2;0.793928!10166-103B4;0.57792!10083-102B2;0.577634!10188-103D8;0.681707!10552-107I3;0.706861!10553-107I4;0.694351!10013-101C4;0.834493!10536-107G5;0.69839!10618-108G6;0.38095!10423-106C9;0.577917!10785-110H2;0.579248!12238-129G6;0.683731!12239-129G7;0.6643!12240-129G8;0.600528!10416-106C2;0.665537!10801-110I9;0.829063!10766-110F1;0.900937!10824-111C5;0.788014!10825-111C6;0.849865!10826-111C7;0.908382!10454-106G4;0.90902!10409-106B4;0.891909!10638-108I8;0.778835!10636-108I6;0.569616!10513-107D9;0.397572!10420-106C6;0.787785!10082-102B1;0.650362!10014-101C5;0.617978!10070-101I7;0.920089!10452-106G2;0.650631!10453-106G3;0.873152!10449-106F8;0.914057!10042-101F6;0.968827!10069-101I6;0.859862!10193-103E4;0.613097!10631-108I1;0.817877!10438-106E6;0.487953!10488-107B2;0.521922!10196-103E7;0.302149!10071-101I8;0.927273!10071-101I8;0.962503!10041-101F5;0.397483!10451-106G1;0.683363!10450-106F9;0.516232!10604-108F1;0.327399!10605-108F2;0.537125!10606-108F3;0.480097!10603-108E9;0.413548!10497-107C2;0.496033!10448-106F7;0.373728!10643-109A4;0.327165!10426-106D3;0.940212!10431-106D8;0.362798!10197-103E8;0.789384!10443-106F2;0.916794!10815-111B5;0.992268!10816-111B6;0.907161!10817-111B7;0.954924!10015-101C6;0.938952!10410-106B5;0.985938!10054-101G9;0.79801!10758-110E2;0.811326!10711-109H9;0.651743!10040-101F4;0.961116!10470-106I2;0.716259!10415-106C1;0.839264!10198-103E9;0.138713!10614-108G2;0.94869!10612-108F9;0.312117!10549-107H9;0.530354!10615-108G3;0.912594!10487-107B1;0.84976!10433-106E1;0.490301!10688-109F4;0.796989!10444-106F3;0.515623!10444-106F3;0.775573!10485-107A8;0.780004!10413-106B8;0.93897!10175-103C4;0.910566!10161-103A8;0.798635!12131-128D7;0.796438!10624-108H3;0.853307!10712-109I1;0.260991!10205-103F7;0.846626!10206-103F8;0.561235!10207-103F9;0.468099!10050-101G5;0.584986!10051-101G6;0.863265!10016-101C7;0.5158!10046-101G1;0.368671!10778-110G4;0.288868!10633-108I3;0.897459!10818-111B8;0.588023!10819-111B9;0.831748!10820-111C1;0.798451!10484-107A7;0.791501!10808-111A7;0.989202!10169-103B7;0.820613!10153-102I9;0.719928!13425-144D5;0.749832!13433-144E4;0.823569!13437-144E8;0.781948!11904-125F5;0.824123!11905-125F6;0.773999!10039-101F3;0.875814!10791-110H8;0.731623!10017-101C8;0.170843!10045-101F9;0.49526!10509-107D5;0.952612!10839-111E2;0.943751!10692-109F8;0.316396!10079-102A7;0.526137!10078-102A6;0.623239!10721-110A1;0.477743!10569-108B2;0.800721!10570-108B3;0.771621!10571-108B4;0.989805!10647-109A8;0.694735!10752-110D5;0.970931!10782-110G8;0.739006!10726-110A6;0.711243!10018-101C9;0.820941!10086-102B5;0.229397!10182-103D2;0.620473!10165-103B3;0.784144!10499-107C4;0.733435!10408-106B3;0.405466!10019-101D1;0.279282!10068-101I5;0.987013!10075-102A3;0.642405!10077-102A5;0.595295!10727-110A7;0.697794!10775-110G1;0.701786!10412-106B7;0.720896!12231-129F8;0.612487!12232-129F9;0.538154!12233-129G1;0.577206!12234-129G2;0.388688!10414-106B9;0.511583!10170-103B8;0.931364!10183-103D3;0.656348!10150-102I6;0.70175!10174-103C3;0.668265!10155-103A2;0.812752!10038-101F2;0.790554!10838-111E1;0.789971!10759-110E3;0.491363!10514-107E1;0.721951!10465-106H6;0.643013!10691-109F7;0.573923!10843-111E6;0.418821!10844-111E7;0.4507!11747-123G1;0.330548!11748-123G2;0.854892!11749-123G3;0.469495!11750-123G4;0.946478!11751-123G5;0.832499!11840-124H4;0.989291!11752-123G6;0.842321!11753-123G7;0.341331!11754-123G8;0.717569!11755-123G9;0.983162!11756-123H1;0.637589!11833-124G6;0.56029!11760-123H5;0.159291!11836-124G9;0.540003!11758-123H3;0.423682!11835-124G8;0.792827!11762-123H7;0.60271!11838-124H2;0.933751!11757-123H2;0.916044!11759-123H4;0.827354!11761-123H6;0.467852!11842-124H6;0.467104!11837-124H1;0.920454!10568-108B1;0.914498!13230-141I8;0.668853!13231-141I9;0.712709!10696-109G3;0.757776!10493-107B7;0.810128!10494-107B8;0.52029!10850-111F4;0.212609!10851-111F5;0.462951!10852-111F6;0.867598!10853-111F7;0.713906!10854-111F8;0.807423!10855-111F9;0.677661!10856-111G1;0.561899!10847-111F1;0.622417!10846-111E9;0.938543!10848-111F2;0.836334!10845-111E8;0.84255!10857-111G2;0.569208!10858-111G3;0.467436!10156-103A3;0.850232!11901-125F2;0.706508!11902-125F3;0.568997!11903-125F4;0.951186!10689-109F5;0.99284!10648-109A9;0.674103!10784-110H1;0.493143!10744-110C6;0.326209!10772-110F7;0.936466!10474-106I6;0.444369!10600-108E6;0.949143!10684-109E9;0.904701!12226-129F3;0.776281!12227-129F4;0.206703!10508-107D4;0.840063!10539-107G8;0.586406!10607-108F4;0.462775!10555-107I6;0.995355!10774-110F9;0.25331!10637-108I7;0.82022!10663-109C6;0.581015!10728-110A8;0.452595!10729-110A9;0.874634!10430-106D7;0.870728!10730-110B1;0.71272!10813-111B3;0.555479!10812-111B2;0.163051!10037-101F1;0.75289!10172-103C1;0.727216!10163-103B1;0.743937!10076-102A4;0.693028!10073-102A1;0.760857!10036-101E9;0.417511!10195-103E6;0.814085!10277-104E7;0.721669!10434-106E2;0.895603!10550-107I1;0.254462!10545-107H5;0.668101!10544-107H4;0.364238!10704-109H2;0.316829!10510-107D6;0.726231!10558-107I9;0.700256!10020-101D2;0.35078!10732-110B3;0.630394!10049-101G4;0.650737!10698-109G5;0.531192!10437-106E5;0.720188!10417-106C3;0.672558!10035-101E8;0.309254!10171-103B9;0.727113!10157-103A4;0.636959!10034-101E7;0.640966!10072-101I9;0.735462!10199-103F1;0.499472!10200-103F2;0.671311!10697-109G4;0.645419!10723-110A3;0.67604!10179-103C8;0.487641!10160-103A7;0.700593!10180-103C9;0.722237!10162-103A9;0.585758!10021-101D3;0.657923!10840-111E3;0.976803!10706-109H4;0.968672!10033-101E6;0.824957!10032-101E5;0.797387!10490-107B4;0.811581!10439-106E7;0.710831!10022-101D4;0.712457!10176-103C5;0.983823!10469-106I1;0.747247!10067-101I4;0.30217!10411-106B6;0.60626!10471-106I3;0.307094!10030-101E3;0.687174!10475-106I7;0.896286!10787-110H4;0.977773!10477-106I9;0.652526!10695-109G2;0.476807!11771-123I7;0.538092!11772-123I8;0.0522638!11773-123I9;0.138457!10093-102C3;0.175371!10442-106F1;0.63675!10442-106F1;0.635003!10201-103F3;0.598384!10639-108I9;0.918722!11843-124H7;0.726245!11841-124H5;0.696058!10693-109F9;0.972172!10436-106E4;0.548461!10483-107A6;0.581659!10282-104F3;0.524343!10023-101D5;0.506801!10066-101I3;0.522074!10065-101I2;0.660295!10800-110I8;0.605625!10610-108F7;0.727493!10841-111E4;0.567727!10541-107H1;0.755078!10842-111E5;0.709586!10562-108A4;0.812669!10024-101D6;0.601141!10064-101I1;0.83579!10609-108F6;0.776638!10048-101G3;0.965056!10781-110G7;0.75442!10181-103D1;0.756123!10159-103A6;0.690982!10056-101H2;0.741936!10737-110B8;0.700732!10025-101D7;0.909292!10044-101F8;0.861222!10424-106D1;0.881871!10463-106H4;0.765192!10616-108G4;0.416286!10486-107A9;0.310128!10062-101H8;0.180405!10202-103F4;0.949484!10158-103A5;0.722065!10441-106E9;0.805351!10031-101E4;0.375402!10063-101H9;0.81082!10063-101H9;0.439858!11763-123H8;0.9154!11765-123I1;0.907658!11768-123I4;0.436173!10807-111A6;0.730984!10790-110H7;0.899893!10798-110I6;0.807021!10786-110H3;0.991922!10591-108D6;0.689636!10593-108D8;0.774957!10590-108D5;0.87582!10026-101D8;0.793167!10096-102C6;0.764249!10168-103B6;0.623103!10154-103A1;0.849687!10209-103G2;0.837912!10061-101H7;0.786941!10027-101D9;0.664744!10043-101F7;0.222691!10783-110G9;0.232477!10028-101E1;0.910347!10060-101H6;0.741707!10203-103F5;0.819417!10059-101H5;0.870185!10047-101G2;0.771142!10029-101E2;0.912156!10058-101H4;0.898904!10418-106C4;0.707568!10492-107B6;0.499268!10694-109G1;0.678219!10797-110I5;0.314559!10057-101H3;0.158383!10100-102D1;0.644267!10055-101H1;0.479435!10204-103F6;0.738092!10191-103E2;0.668285!10563-108A5;0.737964
|name=motif_TAGCNG
|name=motif_TAGCNG
|tomtom_result=UME6#MA0412.1;3;0.00263954;1.25642;1;6;TAGCAG;AATTAGCCGCCGA;-!odd#MA0454.1;5;0.00426878;2.03194;1;6;TAGCAG;AACAGTAGCAG;+!ovo#MA0126.1;2;0.0163076;7.76243;1;6;TAGCAG;AGTAACAGT;+!prd#MA0239.1;2;0.0163076;7.76243;1;6;TAGCAG;AGTAACAGT;+!myb.Ph3#MA0054.1;0;0.0170084;8.096;1;6;TAGCAG;TAACCGTTT;+
}}
}}

Latest revision as of 12:36, 7 September 2012

Full Name: motif_TAGCNG

Motif matrix
POACGT
010002080
022080000
030020800
040208000
05520520520520
060020800

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
UME6#MA0412.130.002639541.2564216TAGCAGAATTAGCCGCCGA-
odd#MA0454.150.004268782.0319416TAGCAGAACAGTAGCAG+
ovo#MA0126.120.01630767.7624316TAGCAGAGTAACAGT+
prd#MA0239.120.01630767.7624316TAGCAGAGTAACAGT+
myb.Ph3#MA0054.100.01700848.09616TAGCAGTAACCGTTT+
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