MacroAPE 1083:Motif GGGACN: Difference between revisions
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11837-124H1;0.359464!10568-108B1;0.687757!13230-141I8;0.00815382!13231-141I9;0.458506!10696-109G3;0.686921!10493-107B7;0.497547!10494-107B8;0.83209!10850-111F4;0.52573!10851-111F5;0.463944!10852-111F6;0.528126!10853-111F7;0.301154!10854-111F8;0.656525!10855-111F9;0.0714168!10856-111G1;0.0540547!10847-111F1;0.600513!10846-111E9;0.318274!10848-111F2;0.232649!10845-111E8;0.190162!10857-111G2;0.238737!10858-111G3;0.322108!10156-103A3;0.492979!11901-125F2;0.909873!11902-125F3;0.0124398!11903-125F4;0.00651599!10689-109F5;0.00259235!10648-109A9;0.925565!10784-110H1;0.463747!10744-110C6;0.97302!10772-110F7;0.969011!10474-106I6;0.785135!10600-108E6;0.975158!10684-109E9;0.366222!12226-129F3;0.257046!12227-129F4;0.194683!10508-107D4;0.301192!10539-107G8;0.810765!10607-108F4;0.826214!10555-107I6;0.215032!10774-110F9;0.405061!10637-108I7;0.557674!10663-109C6;0.751139!10728-110A8;0.94056!10729-110A9;0.96618!10430-106D7;0.558125!10730-110B1;0.695616!10813-111B3;0.329433!10812-111B2;0.281512!10037-101F1;0.825546!10172-103C1;0.961853!10163-103B1;0.778848!10076-102A4;0.89025!10073-102A1;0.999716!10036-101E9;0.637591!10195-103E6;0.848871!10277-104E7;0.92941!10434-106E2;0.759449!10550-107I1;0.132103!10545-107H5;0.129397!10544-107H4;0.0373131!10704-109H2;0.0807707!10510-107D6;0.60879!10558-107I9;0.80513!10020-101D2;0.629589!10732-110B3;0.910215!10049-101G4;0.668053!10698-109G5;0.891759!10437-106E5;0.412267!10417-106C3;0.0588858!10035-101E8;0.909321!10171-103B9;0.978042!10157-103A4;0.765594!10034-101E7;0.978389!10072-101I9;0.973233!10199-103F1;0.539742!10200-103F2;0.594034!10697-109G4;0.746519!10723-110A3;0.413438!10179-103C8;0.0369611!10160-103A7;0.522582!10180-103C9;0.394629!10162-103A9;0.236269!10021-101D3;0.600072!10840-111E3;0.337377!10706-109H4;0.489124!10033-101E6;0.364574!10032-101E5;0.670679!10490-107B4;0.969866!10439-106E7;0.20345!10022-101D4;0.260259!10176-103C5;0.858414!10469-106I1;0.818541!10067-101I4;0.79063!10411-106B6;0.539745!10471-106I3;0.327627!10030-101E3;0.911725!10475-106I7;0.279495!10787-110H4;0.479304!10477-106I9;0.786765!10695-109G2;0.397731!11771-123I7;0.966033!11772-123I8;0.0184585!11773-123I9;0.22303!10093-102C3;0.928053!10442-106F1;0.490529!10442-106F1;0.33337!10201-103F3;0.208645!10639-108I9;0.635231!11843-124H7;0.0184517!11841-124H5;0.476997!10693-109F9;0.740346!10436-106E4;0.556821!10483-107A6;0.498263!10282-104F3;0.181162!10023-101D5;0.815837!10066-101I3;0.554824!10065-101I2;0.427459!10800-110I8;0.503026!10610-108F7;0.171696!10841-111E4;0.927357!10541-107H1;0.303093!10842-111E5;0.777416!10562-108A4;0.560008!10024-101D6;0.18779!10064-101I1;0.514485!10609-108F6;0.619998!10048-101G3;0.0529207!10781-110G7;0.866207!10181-103D1;0.210744!10159-103A6;0.825142!10056-101H2;0.836305!10737-110B8;0.811283!10025-101D7;0.242993!10044-101F8;0.0426985!10424-106D1;0.0628569!10463-106H4;0.848848!10616-108G4;0.509612!10486-107A9;0.544248!10062-101H8;0.364411!10202-103F4;0.384444!10158-103A5;0.31004!10441-106E9;0.630784!10031-101E4;0.930869!10063-101H9;0.920742!10063-101H9;0.81489!11763-123H8;0.940493!11765-123I1;0.530544!11768-123I4;0.971305!10807-111A6;0.35626!10790-110H7;0.871177!10798-110I6;0.828337!10786-110H3;0.414704!10591-108D6;0.945628!10593-108D8;0.708841!10590-108D5;0.970151!10026-101D8;0.788291!10096-102C6;0.829117!10168-103B6;0.476383!10154-103A1;0.951808!10209-103G2;0.889788!10061-101H7;0.68006!10027-101D9;0.923782!10043-101F7;0.397221!10783-110G9;0.28705!10028-101E1;0.0485901!10060-101H6;0.754168!10203-103F5;0.869215!10059-101H5;0.812222!10047-101G2;0.755242!10029-101E2;0.204562!10058-101H4;0.797347!10418-106C4;0.936625!10492-107B6;0.155395!10694-109G1;0.119539!10797-110I5;0.306341!10057-101H3;0.881909!10100-102D1;0.577285!10055-101H1;0.943559!10204-103F6;0.786253!10191-103E2;0.754762!10563-108A5;0.292158 | ||
|name=motif_GGGACN | |name=motif_GGGACN | ||
|tomtom_result=NF-kappaB#MA0061.1;0;0.00180172;0.857618;1;6;GGGACT;GGGAATTTCC;+!RELA#MA0107.1;0;0.00763641;3.63493;1;6;GGGACT;GGGAATTTCC;+!ARG81#MA0272.1;0;0.0126461;6.01954;1;6;GGGACT;GTGACTCT;+!TEC1#MA0406.1;0;0.0150796;7.17787;1;6;GGGACT;GGGAATGT;-!NFKB1#MA0105.1;1;0.0177965;8.47113;1;6;GGGACT;GGGGAATCCCC;-!dl_2#MA0023.1;1;0.0180777;8.60499;1;6;GGGACT;GGGGATTTCC;+ | |||
}} | }} |
Latest revision as of 12:35, 7 September 2012
Full Name: motif_GGGACN
Motif matrix | |||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
NF-kappaB#MA0061.1 | 0 | 0.00180172 | 0.857618 | 1 | 6 | GGGACT | GGGAATTTCC | + |
RELA#MA0107.1 | 0 | 0.00763641 | 3.63493 | 1 | 6 | GGGACT | GGGAATTTCC | + |
ARG81#MA0272.1 | 0 | 0.0126461 | 6.01954 | 1 | 6 | GGGACT | GTGACTCT | + |
TEC1#MA0406.1 | 0 | 0.0150796 | 7.17787 | 1 | 6 | GGGACT | GGGAATGT | - |
NFKB1#MA0105.1 | 1 | 0.0177965 | 8.47113 | 1 | 6 | GGGACT | GGGGAATCCCC | - |
dl_2#MA0023.1 | 1 | 0.0180777 | 8.60499 | 1 | 6 | GGGACT | GGGGATTTCC | + |