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MacroAPE 1083:Motif CNAATG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;1264;0;0!02;316;316;316;316!03;1264;0;0;0!04;1264;0;0;0!05;0;0;0;1264!06;0;0;1264;0 |macroape_1083_sample_pvalues=11376-118A8;0.0122151!...")
 
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;0.041171!12184-129A6;0.0369006!10809-111A8;0.153587!10597-108E3;0.0138738!10717-109I6;0.477151!10455-106G5;0.00533076!10534-107G3;0.552482!10429-106D6;0.111514!10464-106H5;0.337493!10827-111C8;0.672661!10789-110H6;0.726997!10828-111C9;0.43664!10788-110H5;0.393454!10792-110H9;0.448733!10765-110E9;0.572444!10829-111D1;0.328257!10830-111D2;0.6837!10831-111D3;0.514829!10832-111D4;0.640648!10833-111D5;0.320194!10764-110E8;0.282861!10770-110F5;0.34477!10399-106A3;0.373896!10400-106A4;0.492832!10405-106A9;0.510862!10834-111D6;0.444853!10835-111D7;0.93898!10836-111D8;0.155552!10837-111D9;0.129343!10699-109G6;0.192859!10802-111A1;0.20601!10796-110I4;0.263481!10010-101C1;0.113854!10810-111A9;0.0621469!10421-106C7;0.215446!10708-109H6;0.359449!12235-129G3;0.170577!12236-129G4;0.649944!12237-129G5;0.882018!10167-103B5;0.19442!10151-102I7;0.625159!10428-106D5;0.671915!10795-110I3;0.32607!10805-111A4;0.93957!10052-101G7;0.00892382!10189-103D9;0.41489!10589-108D4;0.326042!10425-106D2;0.102198!10427-106D4;0.00307229!10702-109G9;0.304987!10432-106D9;0.0799569!10496-107C1;0.185973!10718-109I7;0.955869!10011-101C2;0.352357!10053-101G8;0.282853!10686-109F2;0.122624!10084-102B3;0.793934!10012-101C3;0.869664!10085-102B4;0.633566!10482-107A5;0.727886!10419-106C5;0.120894!10080-102A8;0.00810328!10760-110E4;0.64664!10709-109H7;0.293007!10710-109H8;0.0599393!10703-109H1;0.0733044!10719-109I8;8.1747e-06!10642-109A3;0.0589485!10177-103C6;0.00613048!10164-103B2;0.707752!10173-103C2;0.751266!10166-103B4;0.720577!10083-102B2;0.830907!10188-103D8;0.797141!10552-107I3;0.638802!10553-107I4;0.660239!10013-101C4;0.00599704!10536-107G5;0.199467!10618-108G6;0.940274!10423-106C9;0.311036!10785-110H2;0.26239!12238-129G6;0.0883236!12239-129G7;0.667326!12240-129G8;0.373946!10416-106C2;0.0561093!10801-110I9;0.825483!10766-110F1;0.650248!10824-111C5;0.703304!10825-111C6;0.340038!10826-111C7;0.348488!10454-106G4;0.400737!10409-106B4;0.620351!10638-108I8;0.303629!10636-108I6;0.147996!10513-107D9;0.000591083!10420-106C6;0.00322845!10082-102B1;0.0151234!10014-101C5;0.947017!10070-101I7;0.406444!10452-106G2;0.193148!10453-106G3;0.3819!10449-106F8;0.3586!10042-101F6;0.413459!10069-101I6;0.766807!10193-103E4;0.118891!10631-108I1;0.72896!10438-106E6;0.299412!10488-107B2;0.140239!10196-103E7;0.680037!10071-101I8;0.403569!10071-101I8;0.424907!10041-101F5;0.853168!10451-106G1;0.23816!10450-106F9;0.0383075!10604-108F1;0.00704228!10605-108F2;0.804421!10606-108F3;0.886818!10603-108E9;0.943487!10497-107C2;0.773334!10448-106F7;0.25947!10643-109A4;0.771508!10426-106D3;0.0241499!10431-106D8;0.0624884!10197-103E8;0.0183356!10443-106F2;0.155604!10815-111B5;0.42311!10816-111B6;0.102605!10817-111B7;0.104869!10015-101C6;0.137717!10410-106B5;0.476687!10054-101G9;0.458238!10758-110E2;0.477284!10711-109H9;0.862874!10040-101F4;0.460364!10470-106I2;0.556956!10415-106C1;0.0166581!10198-103E9;0.577641!10614-108G2;0.338477!10612-108F9;0.411084!10549-107H9;0.090411!10615-108G3;0.19169!10487-107B1;0.0382087!10433-106E1;0.589974!10688-109F4;0.269991!10444-106F3;0.335269!10444-106F3;0.1383!10485-107A8;0.156465!10413-106B8;0.0483544!10175-103C4;0.126453!10161-103A8;0.722808!12131-128D7;0.686021!10624-108H3;0.533776!10712-109I1;0.00824585!10205-103F7;0.408104!10206-103F8;0.138191!10207-103F9;0.125598!10050-101G5;0.0767217!10051-101G6;0.958633!10016-101C7;0.239077!10046-101G1;0.259712!10778-110G4;0.420653!10633-108I3;0.389189!10818-111B8;0.0127287!10819-111B9;0.042968!10820-111C1;0.0427162!10484-107A7;0.0401799!10808-111A7;0.1984!10169-103B7;0.0824976!10153-102I9;0.473842!13425-144D5;0.650919!13433-144E4;1.05049e-05!13437-144E8;9.08932e-06!11904-125F5;8.34363e-06!11905-125F6;0.328583!10039-101F3;0.533166!10791-110H8;0.652878!10017-101C8;0.0297379!10045-101F9;0.191343!10509-107D5;0.774571!10839-111E2;0.231819!10692-109F8;0.205895!10079-102A7;0.0215596!10078-102A6;0.215913!10721-110A1;0.0773172!10569-108B2;0.439167!10570-108B3;0.0255243!10571-108B4;0.00774619!10647-109A8;0.0790037!10752-110D5;0.155873!10782-110G8;0.372056!10726-110A6;0.0181604!10018-101C9;0.0590564!10086-102B5;0.0722293!10182-103D2;0.400764!10165-103B3;0.590865!10499-107C4;0.618671!10408-106B3;0.934752!10019-101D1;0.753786!10068-101I5;0.259172!10075-102A3;0.0654249!10077-102A5;0.0117402!10727-110A7;0.0346039!10775-110G1;0.373868!10412-106B7;0.228115!12231-129F8;0.655336!12232-129F9;0.821691!12233-129G1;0.22326!12234-129G2;0.0944643!10414-106B9;0.555912!10170-103B8;0.352658!10183-103D3;0.547865!10150-102I6;0.537266!10174-103C3;0.602269!10155-103A2;0.41544!10038-101F2;0.620004!10838-111E1;0.636391!10759-110E3;0.0361327!10514-107E1;0.00556687!10465-106H6;0.336063!10691-109F7;0.253082!10843-111E6;0.564068!10844-111E7;2.67827e-06!11747-123G1;1.58064e-08!11748-123G2;0.307947!11749-123G3;0.838529!11750-123G4;0.0426168!11751-123G5;0.152762!11840-124H4;0.0738752!11752-123G6;0.00288032!11753-123G7;0.244724!11754-123G8;0.307363!11755-123G9;0.514685!11756-123H1;0.380171!11833-124G6;0.372989!11760-123H5;0.072164!11836-124G9;0.458583!11758-123H3;0.20418!11835-124G8;0.128583!11762-123H7;0.227091!11838-124H2;0.311551!11757-123H2;0.0754949!11759-123H4;0.133414!11761-123H6;0.456144!11842-124H6;0.651415!11837-124H1;0.496564!10568-108B1;0.272331!13230-141I8;0.234325!13231-141I9;0.438711!10696-109G3;0.518941!10493-107B7;0.727398!10494-107B8;0.969458!10850-111F4;0.255387!10851-111F5;0.0116366!10852-111F6;0.414734!10853-111F7;0.981255!10854-111F8;0.407298!10855-111F9;0.84468!10856-111G1;0.412877!10847-111F1;0.369739!10846-111E9;0.220745!10848-111F2;0.474942!10845-111E8;0.205941!10857-111G2;0.198402!10858-111G3;0.0195738!10156-103A3;0.393186!11901-125F2;0.669573!11902-125F3;0.472316!11903-125F4;0.525282!10689-109F5;0.161939!10648-109A9;0.152402!10784-110H1;0.0806187!10744-110C6;0.284217!10772-110F7;0.53053!10474-106I6;0.330943!10600-108E6;0.931202!10684-109E9;0.00399096!12226-129F3;0.04279!12227-129F4;0.787512!10508-107D4;0.894492!10539-107G8;0.0712154!10607-108F4;0.0188551!10555-107I6;0.00576562!10774-110F9;0.00275339!10637-108I7;0.113758!10663-109C6;0.295767!10728-110A8;0.297939!10729-110A9;0.179833!10430-106D7;0.590414!10730-110B1;0.0799067!10813-111B3;0.285308!10812-111B2;0.387556!10037-101F1;0.0117179!10172-103C1;0.654429!10163-103B1;0.574456!10076-102A4;0.687208!10073-102A1;0.594542!10036-101E9;0.887604!10195-103E6;0.858309!10277-104E7;0.639064!10434-106E2;0.482733!10550-107I1;0.0715426!10545-107H5;0.0538107!10544-107H4;0.278942!10704-109H2;0.13438!10510-107D6;0.943042!10558-107I9;0.27274!10020-101D2;0.00322168!10732-110B3;0.175468!10049-101G4;0.215183!10698-109G5;0.172538!10437-106E5;0.389096!10417-106C3;0.537048!10035-101E8;0.320635!10171-103B9;0.666812!10157-103A4;0.654959!10034-101E7;0.572589!10072-101I9;0.680615!10199-103F1;0.789423!10200-103F2;0.196852!10697-109G4;0.163911!10723-110A3;0.798286!10179-103C8;0.328448!10160-103A7;0.303291!10180-103C9;0.236831!10162-103A9;0.0192346!10021-101D3;0.054112!10840-111E3;0.0187292!10706-109H4;0.299413!10033-101E6;0.238149!10032-101E5;0.473459!10490-107B4;0.748058!10439-106E7;0.368366!10022-101D4;0.138212!10176-103C5;0.165193!10469-106I1;0.737819!10067-101I4;0.0754906!10411-106B6;0.432478!10471-106I3;0.626061!10030-101E3;0.471259!10475-106I7;0.614035!10787-110H4;0.00866052!10477-106I9;0.0142436!10695-109G2;0.00990276!11771-123I7;0.500234!11772-123I8;0.865029!11773-123I9;0.477406!10093-102C3;0.357345!10442-106F1;0.0607965!10442-106F1;0.354291!10201-103F3;0.400572!10639-108I9;0.242822!11843-124H7;0.00950167!11841-124H5;0.315302!10693-109F9;0.372179!10436-106E4;0.0283862!10483-107A6;0.249275!10282-104F3;0.0300443!10023-101D5;0.0464062!10066-101I3;0.214942!10065-101I2;0.269544!10800-110I8;0.414247!10610-108F7;0.0023951!10841-111E4;0.000563749!10541-107H1;0.0876199!10842-111E5;0.0406296!10562-108A4;0.00169969!10024-101D6;0.00317152!10064-101I1;0.35357!10609-108F6;0.417986!10048-101G3;0.00455268!10781-110G7;0.151425!10181-103D1;0.019256!10159-103A6;0.580269!10056-101H2;0.577299!10737-110B8;0.899703!10025-101D7;0.650798!10044-101F8;0.0925679!10424-106D1;0.376227!10463-106H4;0.262951!10616-108G4;0.641589!10486-107A9;0.902969!10062-101H8;0.510068!10202-103F4;0.637618!10158-103A5;0.0663619!10441-106E9;0.504122!10031-101E4;0.00401076!10063-101H9;0.818836!10063-101H9;0.813765!11763-123H8;0.332443!11765-123I1;0.195664!11768-123I4;0.0327462!10807-111A6;0.0850049!10790-110H7;0.000952514!10798-110I6;0.00150494!10786-110H3;0.00160302!10591-108D6;0.0112747!10593-108D8;0.0329453!10590-108D5;0.265647!10026-101D8;0.0854383!10096-102C6;0.930589!10168-103B6;0.158749!10154-103A1;0.577843!10209-103G2;0.748416!10061-101H7;0.229939!10027-101D9;0.224457!10043-101F7;0.81239!10783-110G9;0.983387!10028-101E1;0.527755!10060-101H6;0.00884!10203-103F5;0.178219!10059-101H5;0.294381!10047-101G2;0.287845!10029-101E2;0.525051!10058-101H4;0.103463!10418-106C4;0.216969!10492-107B6;0.00391698!10694-109G1;0.101945!10797-110I5;0.914124!10057-101H3;0.706128!10100-102D1;0.505248!10055-101H1;0.108488!10204-103F6;0.571747!10191-103E2;0.150958!10563-108A5;0.256029
|name=motif_CNAATG
|name=motif_CNAATG
|tomtom_result=zen#MA0256.1;0;0.00250412;1.19196;1;6;CAAATG;CTAATGA;+!Pdx1#MA0132.1;0;0.00597158;2.84247;1;6;CAAATG;CTAATT;+!eve#MA0221.1;0;0.0065461;3.11595;1;6;CAAATG;CTAATGA;+!ems#MA0219.1;0;0.00970585;4.61998;1;6;CAAATG;TTAATGA;+!HOXA5#MA0158.1;2;0.0101169;4.81566;1;6;CAAATG;CACTAATT;+!Scr#MA0203.1;0;0.0125894;5.99255;1;6;CAAATG;TTAATGA;+!ind#MA0228.1;0;0.0142858;6.80004;1;6;CAAATG;CTAATTA;+!ap#MA0209.1;0;0.0182497;8.68685;1;6;CAAATG;CTAATTA;+!pb#MA0238.1;0;0.0182497;8.68685;1;6;CAAATG;TTAATTA;+!E5#MA0189.1;0;0.0189851;9.0369;1;6;CAAATG;TTAATTA;+!ATHB-5#MA0110.1;0;0.0194991;9.28158;1;6;CAAATG;CCAATTATT;+
}}
}}

Latest revision as of 12:29, 7 September 2012

Full Name: motif_CNAATG

Motif matrix
POACGT
010126400
02316316316316
031264000
041264000
050001264
060012640

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
zen#MA0256.100.002504121.1919616CAAATGCTAATGA+
Pdx1#MA0132.100.005971582.8424716CAAATGCTAATT+
eve#MA0221.100.00654613.1159516CAAATGCTAATGA+
ems#MA0219.100.009705854.6199816CAAATGTTAATGA+
HOXA5#MA0158.120.01011694.8156616CAAATGCACTAATT+
Scr#MA0203.100.01258945.9925516CAAATGTTAATGA+
ind#MA0228.100.01428586.8000416CAAATGCTAATTA+
ap#MA0209.100.01824978.6868516CAAATGCTAATTA+
pb#MA0238.100.01824978.6868516CAAATGTTAATTA+
E5#MA0189.100.01898519.036916CAAATGTTAATTA+
ATHB-5#MA0110.100.01949919.2815816CAAATGCCAATTATT+
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