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MacroAPE 1083:CNhs11290 bl f2: Difference between revisions

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0789-110H6;0.849822!10828-111C9;0.465672!10788-110H5;0.997191!10792-110H9;0.700877!10765-110E9;0.252151!10829-111D1;0.643372!10830-111D2;0.930991!10831-111D3;0.266731!10832-111D4;0.488767!10833-111D5;0.406708!10764-110E8;0.403086!10770-110F5;0.385875!10399-106A3;0.393602!10400-106A4;0.983305!10405-106A9;0.915429!10834-111D6;0.887346!10835-111D7;0.860735!10836-111D8;0.490905!10837-111D9;0.320548!10699-109G6;0.903202!10802-111A1;0.245475!10796-110I4;0.324334!10010-101C1;0.09537!10810-111A9;0.124492!10421-106C7;0.101265!10708-109H6;0.490699!12235-129G3;0.334386!12236-129G4;0.264609!12237-129G5;0.741313!10167-103B5;0.380768!10151-102I7;0.0578178!10428-106D5;0.10643!10795-110I3;0.621!10805-111A4;0.15038!10052-101G7;0.12481!10189-103D9;0.0981174!10589-108D4;0.27773!10425-106D2;0.552813!10427-106D4;0.123986!10702-109G9;0.29952!10432-106D9;0.171222!10496-107C1;0.113336!10718-109I7;0.125744!10011-101C2;0.556849!10053-101G8;0.162629!10686-109F2;0.65233!10084-102B3;0.919863!10012-101C3;0.141701!10085-102B4;0.0607871!10482-107A5;0.317254!10419-106C5;0.11981!10080-102A8;0.00323511!10760-110E4;0.193358!10709-109H7;0.367128!10710-109H8;0.0266266!10703-109H1;0.0512017!10719-109I8;0.250821!10642-109A3;0.194396!10177-103C6;0.626639!10164-103B2;0.0567387!10173-103C2;0.0354997!10166-103B4;0.494363!10083-102B2;0.308895!10188-103D8;0.31459!10552-107I3;0.0522277!10553-107I4;0.225671!10013-101C4;0.0228119!10536-107G5;0.269965!10618-108G6;0.628649!10423-106C9;0.100434!10785-110H2;0.241047!12238-129G6;0.256765!12239-129G7;0.561743!12240-129G8;0.319376!10416-106C2;0.322666!10801-110I9;0.47244!10766-110F1;0.443693!10824-111C5;0.617512!10825-111C6;0.297455!10826-111C7;0.286054!10454-106G4;0.330771!10409-106B4;0.179421!10638-108I8;0.686383!10636-108I6;0.217696!10513-107D9;0.118053!10420-106C6;0.167796!10082-102B1;0.047437!10014-101C5;0.251065!10070-101I7;0.293032!10452-106G2;0.18893!10453-106G3;0.0481987!10449-106F8;0.151473!10042-101F6;0.148816!10069-101I6;0.213539!10193-103E4;0.436418!10631-108I1;0.0795731!10438-106E6;0.223342!10488-107B2;0.0730695!10196-103E7;0.151391!10071-101I8;0.0890468!10071-101I8;0.112966!10041-101F5;0.349772!10451-106G1;0.0365388!10450-106F9;0.0149578!10604-108F1;0.094451!10605-108F2;0.400989!10606-108F3;0.562859!10603-108E9;0.264966!10497-107C2;0.429837!10448-106F7;0.0456364!10643-109A4;0.183045!10426-106D3;0.0944444!10431-106D8;0.0877387!10197-103E8;0.114379!10443-106F2;0.0912481!10815-111B5;0.0540338!10816-111B6;0.244882!10817-111B7;0.187008!10015-101C6;0.264664!10410-106B5;0.302715!10054-101G9;0.0967623!10758-110E2;0.155718!10711-109H9;0.686214!10040-101F4;0.675381!10470-106I2;0.0853838!10415-106C1;0.0581448!10198-103E9;0.519668!10614-108G2;0.148582!10612-108F9;0.283619!10549-107H9;0.0983654!10615-108G3;0.0533871!10487-107B1;0.0235512!10433-106E1;0.198736!10688-109F4;0.167522!10444-106F3;0.242417!10444-106F3;0.149277!10485-107A8;0.162502!10413-106B8;0.746289!10175-103C4;0.94544!10161-103A8;0.105943!12131-128D7;0.0973031!10624-108H3;0.0378746!10712-109I1;0.333596!10205-103F7;0.556305!10206-103F8;0.263707!10207-103F9;0.289817!10050-101G5;0.280385!10051-101G6;0.854209!10016-101C7;0.568827!10046-101G1;0.599892!10778-110G4;0.648711!10633-108I3;0.430103!10818-111B8;0.17142!10819-111B9;0.318011!10820-111C1;0.268117!10484-107A7;0.316672!10808-111A7;0.095935!10169-103B7;0.430681!10153-102I9;0.104338!13425-144D5;0.0987991!13433-144E4;0.517615!13437-144E8;0.386123!11904-125F5;0.527312!11905-125F6;0.164073!10039-101F3;0.0394684!10791-110H8;0.0996473!10017-101C8;0.0683166!10045-101F9;0.0977034!10509-107D5;0.146739!10839-111E2;0.250333!10692-109F8;0.476005!10079-102A7;0.0356638!10078-102A6;0.343927!10721-110A1;0.417456!10569-108B2;0.0920721!10570-108B3;0.186939!10571-108B4;0.241798!10647-109A8;0.115156!10752-110D5;0.0264517!10782-110G8;0.442674!10726-110A6;0.305016!10018-101C9;0.0537011!10086-102B5;0.2874!10182-103D2;0.0132158!10165-103B3;0.111063!10499-107C4;0.0798117!10408-106B3;0.151687!10019-101D1;0.0827937!10068-101I5;0.246739!10075-102A3;0.37565!10077-102A5;0.291842!10727-110A7;0.078955!10775-110G1;0.118886!10412-106B7;0.101201!12231-129F8;0.0579519!12232-129F9;0.546952!12233-129G1;0.931926!12234-129G2;0.892151!10414-106B9;0.298418!10170-103B8;0.00557187!10183-103D3;0.0298986!10150-102I6;0.0747201!10174-103C3;0.0517037!10155-103A2;0.0796281!10038-101F2;0.0519464!10838-111E1;0.139262!10759-110E3;0.0503897!10514-107E1;0.435339!10465-106H6;0.0765064!10691-109F7;0.677147!10843-111E6;0.591431!10844-111E7;0.259825!11747-123G1;0.40763!11748-123G2;0.228187!11749-123G3;0.542437!11750-123G4;0.36417!11751-123G5;0.122942!11840-124H4;0.312737!11752-123G6;0.254122!11753-123G7;0.533158!11754-123G8;0.576609!11755-123G9;0.371559!11756-123H1;0.291366!11833-124G6;0.528083!11760-123H5;0.702056!11836-124G9;0.391306!11758-123H3;0.331344!11835-124G8;0.295803!11762-123H7;0.268998!11838-124H2;0.519713!11757-123H2;0.699457!11759-123H4;0.428321!11761-123H6;0.253203!11842-124H6;0.841502!11837-124H1;0.572449!10568-108B1;0.241777!13230-141I8;0.299396!13231-141I9;0.356104!10696-109G3;0.241427!10493-107B7;0.529234!10494-107B8;0.210734!10850-111F4;0.131893!10851-111F5;0.226198!10852-111F6;0.748576!10853-111F7;0.826234!10854-111F8;0.122946!10855-111F9;0.306821!10856-111G1;0.372159!10847-111F1;0.257457!10846-111E9;0.207759!10848-111F2;0.168418!10845-111E8;0.159744!10857-111G2;0.382694!10858-111G3;0.208775!10156-103A3;0.332919!11901-125F2;0.0646003!11902-125F3;0.723465!11903-125F4;0.579566!10689-109F5;0.945617!10648-109A9;0.944804!10784-110H1;0.295324!10744-110C6;0.0165088!10772-110F7;0.143905!10474-106I6;0.695183!10600-108E6;0.604095!10684-109E9;0.371061!12226-129F3;0.254484!12227-129F4;0.0669636!10508-107D4;0.579394!10539-107G8;0.208857!10607-108F4;0.205452!10555-107I6;0.232595!10774-110F9;0.221323!10637-108I7;0.17584!10663-109C6;0.244766!10728-110A8;0.0211877!10729-110A9;0.0794661!10430-106D7;0.63383!10730-110B1;0.0566679!10813-111B3;0.455122!10812-111B2;0.59093!10037-101F1;0.506131!10172-103C1;0.0805179!10163-103B1;0.0729024!10076-102A4;0.08208!10073-102A1;0.114376!10036-101E9;0.517424!10195-103E6;0.10343!10277-104E7;0.0665757!10434-106E2;0.613854!10550-107I1;0.13743!10545-107H5;0.195383!10544-107H4;0.360698!10704-109H2;0.320899!10510-107D6;0.758458!10558-107I9;0.384568!10020-101D2;0.809897!10732-110B3;0.137135!10049-101G4;0.689279!10698-109G5;0.130313!10437-106E5;0.245762!10417-106C3;0.162265!10035-101E8;0.0305821!10171-103B9;0.0933453!10157-103A4;0.070085!10034-101E7;0.0619847!10072-101I9;0.102928!10199-103F1;0.467577!10200-103F2;0.360618!10697-109G4;0.237548!10723-110A3;0.481182!10179-103C8;0.180322!10160-103A7;0.440218!10180-103C9;0.28855!10162-103A9;0.11529!10021-101D3;0.137762!10840-111E3;0.377576!10706-109H4;0.353934!10033-101E6;0.621653!10032-101E5;0.121232!10490-107B4;0.107389!10439-106E7;0.0929396!10022-101D4;0.0560471!10176-103C5;0.173371!10469-106I1;0.0387517!10067-101I4;0.0741358!10411-106B6;0.268819!10471-106I3;0.522779!10030-101E3;0.0444064!10475-106I7;0.186953!10787-110H4;0.162651!10477-106I9;0.341434!10695-109G2;0.331297!11771-123I7;0.85871!11772-123I8;0.827468!11773-123I9;0.737174!10093-102C3;0.0768439!10442-106F1;0.332248!10442-106F1;0.34532!10201-103F3;0.391517!10639-108I9;0.129117!11843-124H7;0.0581585!11841-124H5;0.279972!10693-109F9;0.535892!10436-106E4;0.058178!10483-107A6;0.0344632!10282-104F3;0.102049!10023-101D5;0.477634!10066-101I3;0.952336!10065-101I2;0.402735!10800-110I8;0.313642!10610-108F7;0.0262913!10841-111E4;0.175061!10541-107H1;0.17837!10842-111E5;0.0542555!10562-108A4;0.246097!10024-101D6;0.0386577!10064-101I1;0.168941!10609-108F6;0.0557092!10048-101G3;0.0599771!10781-110G7;0.268036!10181-103D1;0.187213!10159-103A6;0.168026!10056-101H2;0.122334!10737-110B8;0.200122!10025-101D7;0.594848!10044-101F8;0.0982126!10424-106D1;0.121212!10463-106H4;0.538498!10616-108G4;0.0467383!10486-107A9;0.00677677!10062-101H8;0.0189334!10202-103F4;0.72535!10158-103A5;0.211839!10441-106E9;0.170469!10031-101E4;0.756305!10063-101H9;0.0945744!10063-101H9;0.352538!11763-123H8;0.0688702!11765-123I1;0.0825605!11768-123I4;0.190472!10807-111A6;0.09792!10790-110H7;0.785682!10798-110I6;0.781201!10786-110H3;0.53713!10591-108D6;0.576127!10593-108D8;0.74703!10590-108D5;0.413519!10026-101D8;0.300217!10096-102C6;0.456656!10168-103B6;0.0702019!10154-103A1;0.125752!10209-103G2;0.0878907!10061-101H7;0.209003!10027-101D9;0.469347!10043-101F7;0.504621!10783-110G9;0.988293!10028-101E1;0.119166!10060-101H6;0.150269!10203-103F5;0.474408!10059-101H5;0.33596!10047-101G2;0.635083!10029-101E2;0.326236!10058-101H4;0.101897!10418-106C4;0.260975!10492-107B6;0.112165!10694-109G1;0.103627!10797-110I5;0.442692!10057-101H3;0.256973!10100-102D1;0.22359!10055-101H1;0.339414!10204-103F6;0.382298!10191-103E2;0.490295!10563-108A5;0.300341
|name=CNhs11290_bl_f2
|name=CNhs11290_bl_f2
|tomtom_result=RUNX1#MA0002.2;2;0.00468453;2.22984;1;8;ACCAGAGA;AAACCACAGAC;-!RME1#MA0370.1;0;0.00881584;4.19634;1;8;ACCAGAGA;TCCAAAGGAA;+!HNF4A#MA0114.1;2;0.0133736;6.36585;1;8;ACCAGAGA;AGGCCAAAGGTCA;+!CUP2#MA0287.1;1;0.0145665;6.93364;1;8;ACCAGAGA;CAGCAAAAATG;+!pan#MA0237.1;1;0.015224;7.24662;1;7;ACCAGAGA;GATCAAAG;-!MET28#MA0332.1;-1;0.02063;9.8199;1;6;ACCAGAGA;CCACAG;-
}}
}}

Latest revision as of 12:28, 7 September 2012

Full Name: CNhs11290_bl_f2

Motif matrix
POACGT
1642.0041417039956532.027454250661331.538836368642812482.4831927560146
245.36545684585661896.1968870373694531.9548729118986214.5364082841899
31.01889910305565911684.9969277701441.01889910305565911.0188991030556591
41688.05362507931110.00.00.0
5701.91149416598545.88234830608959940.25978260724030.0
61688.05362507931110.00.00.0
7506.8944349880888566.895017857890181066.186329421435648.07784281189883
8962.6782020528225289.4939817284937323.67769042793367112.20375087006472

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RUNX1#MA0002.220.004684532.2298418ACCAGAGAAAACCACAGAC-
RME1#MA0370.100.008815844.1963418ACCAGAGATCCAAAGGAA+
HNF4A#MA0114.120.01337366.3658518ACCAGAGAAGGCCAAAGGTCA+
CUP2#MA0287.110.01456656.9336418ACCAGAGACAGCAAAAATG+
pan#MA0237.110.0152247.2466217ACCAGAGAGATCAAAG-
MET28#MA0332.1-10.020639.819916ACCAGAGACCACAG-
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