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MacroAPE 1083:Motif602: Difference between revisions

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!10493-107B7;0.0226953!10494-107B8;0.923525!10850-111F4;0.126912!10851-111F5;0.12829!10852-111F6;0.890458!10853-111F7;0.805813!10854-111F8;0.123146!10855-111F9;0.8346!10856-111G1;0.424442!10847-111F1;0.589247!10846-111E9;0.838116!10848-111F2;0.858176!10845-111E8;0.263367!10857-111G2;0.92086!10858-111G3;0.111394!10156-103A3;0.551591!11901-125F2;0.147624!11902-125F3;0.93373!11903-125F4;0.694131!10689-109F5;0.848413!10648-109A9;0.887073!10784-110H1;0.411469!10744-110C6;0.772893!10772-110F7;0.427398!10474-106I6;0.183115!10600-108E6;0.27585!10684-109E9;0.286887!12226-129F3;0.392363!12227-129F4;0.64341!10508-107D4;0.587933!10539-107G8;0.610734!10607-108F4;0.787975!10555-107I6;0.716897!10774-110F9;0.96366!10637-108I7;0.125152!10663-109C6;0.557317!10728-110A8;0.363528!10729-110A9;0.806366!10430-106D7;0.289481!10730-110B1;0.858611!10813-111B3;0.576268!10812-111B2;0.624351!10037-101F1;0.846768!10172-103C1;0.166826!10163-103B1;0.22485!10076-102A4;0.149862!10073-102A1;0.18718!10036-101E9;0.317152!10195-103E6;0.158357!10277-104E7;0.200401!10434-106E2;0.343733!10550-107I1;0.580232!10545-107H5;0.37894!10544-107H4;0.543398!10704-109H2;0.574096!10510-107D6;0.0450755!10558-107I9;0.270467!10020-101D2;0.528015!10732-110B3;0.356203!10049-101G4;0.467295!10698-109G5;0.82513!10437-106E5;0.197357!10417-106C3;0.471494!10035-101E8;0.544045!10171-103B9;0.14497!10157-103A4;0.22879!10034-101E7;0.164714!10072-101I9;0.137212!10199-103F1;0.320618!10200-103F2;0.479515!10697-109G4;0.749112!10723-110A3;0.517572!10179-103C8;0.608184!10160-103A7;0.243402!10180-103C9;0.0542683!10162-103A9;0.282107!10021-101D3;0.127272!10840-111E3;0.461228!10706-109H4;0.180464!10033-101E6;0.238753!10032-101E5;0.244068!10490-107B4;0.164289!10439-106E7;0.359499!10022-101D4;0.526129!10176-103C5;0.375933!10469-106I1;0.221005!10067-101I4;0.43283!10411-106B6;0.569153!10471-106I3;0.412059!10030-101E3;0.12563!10475-106I7;0.319668!10787-110H4;0.977913!10477-106I9;0.64779!10695-109G2;0.770373!11771-123I7;0.0604905!11772-123I8;0.679278!11773-123I9;0.785366!10093-102C3;0.400043!10442-106F1;0.524923!10442-106F1;0.50094!10201-103F3;0.534572!10639-108I9;0.523075!11843-124H7;0.551167!11841-124H5;0.268304!10693-109F9;0.100698!10436-106E4;0.679837!10483-107A6;0.255626!10282-104F3;0.585777!10023-101D5;0.69521!10066-101I3;0.741537!10065-101I2;0.961391!10800-110I8;0.996855!10610-108F7;0.303011!10841-111E4;0.905979!10541-107H1;0.488043!10842-111E5;0.665374!10562-108A4;0.90167!10024-101D6;0.915337!10064-101I1;0.990369!10609-108F6;0.671262!10048-101G3;0.307624!10781-110G7;0.160121!10181-103D1;0.0892966!10159-103A6;0.430006!10056-101H2;0.170546!10737-110B8;0.588443!10025-101D7;0.155637!10044-101F8;0.915429!10424-106D1;0.870213!10463-106H4;0.151663!10616-108G4;0.779955!10486-107A9;0.491942!10062-101H8;0.1192!10202-103F4;0.63229!10158-103A5;0.492663!10441-106E9;0.321948!10031-101E4;0.845356!10063-101H9;0.19402!10063-101H9;0.287115!11763-123H8;0.77592!11765-123I1;0.509204!11768-123I4;0.690729!10807-111A6;0.997484!10790-110H7;0.880019!10798-110I6;0.156672!10786-110H3;0.293807!10591-108D6;0.657337!10593-108D8;0.107305!10590-108D5;0.886179!10026-101D8;0.171868!10096-102C6;0.925224!10168-103B6;0.860878!10154-103A1;0.295756!10209-103G2;0.253876!10061-101H7;0.63848!10027-101D9;0.874355!10043-101F7;0.762289!10783-110G9;0.960923!10028-101E1;0.786975!10060-101H6;0.636842!10203-103F5;0.34257!10059-101H5;0.567665!10047-101G2;0.548308!10029-101E2;0.799412!10058-101H4;0.882511!10418-106C4;0.852425!10492-107B6;0.875754!10694-109G1;0.373856!10797-110I5;0.18756!10057-101H3;0.71858!10100-102D1;0.8009!10055-101H1;0.242873!10204-103F6;0.805153!10191-103E2;0.123773!10563-108A5;0.946531
|name=motif602
|name=motif602
|tomtom_result=SP1#MA0079.2;2;0.000285865;0.136072;0.2715;8;CCGCCTCC;CCCCGCCCCC;+!abi4#MA0123.1;2;0.00183124;0.871671;0.668778;8;CCGCCTCC;CGGTGCCCCC;+!btd#MA0443.1;1;0.00214424;1.02066;0.668778;8;CCGCCTCC;TCCGCCCCCT;-!MZF1_5-13#MA0057.1;2;0.00336948;1.60387;0.668778;8;CCGCCTCC;TTCCCCCTAC;-!IXR1#MA0323.1;2;0.00439283;2.09099;0.668778;8;CCGCCTCC;CCCCGCTTCCGGCTT;-!RPN4#MA0373.1;-1;0.00489369;2.3294;0.668778;7;CCGCCTCC;CGCCACC;-!SP1#MA0079.2;3;0.00492914;2.34627;0.668778;7;CCGCCTCC;ACCCCGCCCC;-!GCR2#MA0305.1;-2;0.00741907;3.53148;0.880781;6;CCGCCTCC;GCTTCCT;+!GABPA#MA0062.2;1;0.0104074;4.95394;0.997635;8;CCGCCTCC;GCCACTTCCGG;-!CTCF#MA0139.1;2;0.0107023;5.09431;0.997635;8;CCGCCTCC;TAGCGCCCCCTGGTGGCCA;-
}}
}}

Latest revision as of 12:24, 7 September 2012

Full Name: motif602

Motif matrix
POACGT
01238314847125912510
0231256639981308447617
03102092423710202019489
04239614488649593714
0518931490147834265
06043730151582
07166014269664795120
08378114687905295

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.220.0002858650.1360720.27158CCGCCTCCCCCCGCCCCC+
abi4#MA0123.120.001831240.8716710.6687788CCGCCTCCCGGTGCCCCC+
btd#MA0443.110.002144241.020660.6687788CCGCCTCCTCCGCCCCCT-
MZF1_5-13#MA0057.120.003369481.603870.6687788CCGCCTCCTTCCCCCTAC-
IXR1#MA0323.120.004392832.090990.6687788CCGCCTCCCCCCGCTTCCGGCTT-
RPN4#MA0373.1-10.004893692.32940.6687787CCGCCTCCCGCCACC-
SP1#MA0079.230.004929142.346270.6687787CCGCCTCCACCCCGCCCC-
GCR2#MA0305.1-20.007419073.531480.8807816CCGCCTCCGCTTCCT+
GABPA#MA0062.210.01040744.953940.9976358CCGCCTCCGCCACTTCCGG-
CTCF#MA0139.120.01070235.094310.9976358CCGCCTCCTAGCGCCCCCTGGTGGCCA-
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