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MacroAPE 1083:Motif218: Difference between revisions

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12176-128I7;0.0237222!12177-128I8;0.00744047!12182-129A4;0.00908926!12183-129A5;0.00815106!12184-129A6;0.0152104!10809-111A8;0.018351!10597-108E3;0.469196!10717-109I6;0.0664325!10455-106G5;0.245648!10534-107G3;0.0973199!10429-106D6;0.0235149!10464-106H5;0.0279176!10827-111C8;0.388968!10789-110H6;0.0327547!10828-111C9;0.101834!10788-110H5;0.3569!10792-110H9;0.062536!10765-110E9;0.00196169!10829-111D1;0.0333384!10830-111D2;0.999827!10831-111D3;0.0645372!10832-111D4;0.317576!10833-111D5;0.322482!10764-110E8;0.151458!10770-110F5;0.993774!10399-106A3;0.344048!10400-106A4;0.146652!10405-106A9;0.196452!10834-111D6;0.129448!10835-111D7;0.671378!10836-111D8;0.0121991!10837-111D9;0.0280303!10699-109G6;0.0142688!10802-111A1;0.00743839!10796-110I4;0.005971!10010-101C1;0.770213!10810-111A9;0.000836917!10421-106C7;0.217422!10708-109H6;0.0124667!12235-129G3;0.207962!12236-129G4;0.504303!12237-129G5;0.133828!10167-103B5;0.525648!10151-102I7;0.126854!10428-106D5;0.129698!10795-110I3;0.927054!10805-111A4;0.346837!10052-101G7;0.784529!10189-103D9;0.941866!10589-108D4;0.626445!10425-106D2;0.0840411!10427-106D4;0.57669!10702-109G9;0.120741!10432-106D9;0.267912!10496-107C1;0.335184!10718-109I7;0.161522!10011-101C2;0.631564!10053-101G8;0.598942!10686-109F2;0.033228!10084-102B3;0.0551363!10012-101C3;0.00812787!10085-102B4;0.0172826!10482-107A5;0.654544!10419-106C5;0.136291!10080-102A8;0.11762!10760-110E4;0.141572!10709-109H7;0.260768!10710-109H8;0.0863709!10703-109H1;0.844126!10719-109I8;0.268825!10642-109A3;0.866414!10177-103C6;0.546182!10164-103B2;0.0335951!10173-103C2;0.014656!10166-103B4;0.087741!10083-102B2;0.0613791!10188-103D8;0.058143!10552-107I3;0.0699895!10553-107I4;0.970415!10013-101C4;0.377373!10536-107G5;0.502051!10618-108G6;0.264596!10423-106C9;0.0204132!10785-110H2;0.845131!12238-129G6;0.945601!12239-129G7;0.13025!12240-129G8;0.331403!10416-106C2;0.0439367!10801-110I9;0.134392!10766-110F1;0.134928!10824-111C5;0.0297768!10825-111C6;0.667314!10826-111C7;0.89368!10454-106G4;0.759301!10409-106B4;0.520974!10638-108I8;8.65342e-05!10636-108I6;0.0423399!10513-107D9;0.754268!10420-106C6;0.104987!10082-102B1;0.0588739!10014-101C5;0.255579!10070-101I7;0.437273!10452-106G2;0.160813!10453-106G3;0.163404!10449-106F8;0.376659!10042-101F6;0.441845!10069-101I6;0.0805619!10193-103E4;0.0795239!10631-108I1;0.00204771!10438-106E6;0.0656155!10488-107B2;0.0134302!10196-103E7;0.230684!10071-101I8;0.182665!10071-101I8;0.933208!10041-101F5;0.484527!10451-106G1;0.378906!10450-106F9;0.886012!10604-108F1;0.153304!10605-108F2;0.237969!10606-108F3;0.404688!10603-108E9;0.180699!10497-107C2;0.077178!10448-106F7;0.224916!10643-109A4;0.149014!10426-106D3;0.982896!10431-106D8;0.549937!10197-103E8;0.0577351!10443-106F2;0.528768!10815-111B5;0.170129!10816-111B6;0.104047!10817-111B7;0.16021!10015-101C6;0.227258!10410-106B5;0.121782!10054-101G9;0.167595!10758-110E2;0.937336!10711-109H9;0.09344!10040-101F4;0.00701834!10470-106I2;0.0309844!10415-106C1;0.0571486!10198-103E9;0.0683802!10614-108G2;0.825171!10612-108F9;0.546361!10549-107H9;0.350875!10615-108G3;0.221798!10487-107B1;0.801475!10433-106E1;0.84252!10688-109F4;0.0113732!10444-106F3;0.8103!10444-106F3;0.00130633!10485-107A8;0.00358826!10413-106B8;0.90149!10175-103C4;0.0417358!10161-103A8;0.0363293!12131-128D7;0.0548141!10624-108H3;0.0751343!10712-109I1;0.482198!10205-103F7;0.00758119!10206-103F8;0.172279!10207-103F9;0.340088!10050-101G5;0.0373854!10051-101G6;0.0407806!10016-101C7;0.0437809!10046-101G1;0.0241254!10778-110G4;0.218497!10633-108I3;0.48838!10818-111B8;0.212054!10819-111B9;0.357132!10820-111C1;0.335559!10484-107A7;0.379492!10808-111A7;0.0883523!10169-103B7;0.153872!10153-102I9;0.0996466!13425-144D5;0.0544549!13433-144E4;0.506153!13437-144E8;0.395926!11904-125F5;0.130511!11905-125F6;0.234717!10039-101F3;0.219497!10791-110H8;0.0707974!10017-101C8;0.863899!10045-101F9;0.647448!10509-107D5;0.45407!10839-111E2;0.157125!10692-109F8;0.690893!10079-102A7;0.857207!10078-102A6;0.128371!10721-110A1;0.0311682!10569-108B2;0.0125395!10570-108B3;0.335132!10571-108B4;0.131379!10647-109A8;0.445515!10752-110D5;0.0107564!10782-110G8;0.0247918!10726-110A6;0.303515!10018-101C9;0.0507353!10086-102B5;0.668823!10182-103D2;0.41277!10165-103B3;0.216307!10499-107C4;0.145121!10408-106B3;0.0147041!10019-101D1;0.662285!10068-101I5;0.39195!10075-102A3;0.997293!10077-102A5;0.688852!10727-110A7;0.40287!10775-110G1;0.12817!10412-106B7;0.0169806!12231-129F8;0.0595182!12232-129F9;0.164774!12233-129G1;0.218095!12234-129G2;0.27884!10414-106B9;0.249618!10170-103B8;0.814416!10183-103D3;0.0334261!10150-102I6;0.0320117!10174-103C3;0.021557!10155-103A2;0.0599454!10038-101F2;0.0437177!10838-111E1;0.102271!10759-110E3;0.684911!10514-107E1;0.0799689!10465-106H6;0.724797!10691-109F7;0.6015!10843-111E6;0.0614672!10844-111E7;0.0365106!11747-123G1;0.935831!11748-123G2;0.0198344!11749-123G3;0.0211778!11750-123G4;0.0248204!11751-123G5;0.45233!11840-124H4;0.180059!11752-123G6;0.373492!11753-123G7;0.0092223!11754-123G8;0.0352561!11755-123G9;0.0459925!11756-123H1;0.0390973!11833-124G6;0.0750598!11760-123H5;0.00418359!11836-124G9;0.0130171!11758-123H3;0.245618!11835-124G8;0.161888!11762-123H7;0.00760022!11838-124H2;0.327869!11757-123H2;0.206583!11759-123H4;0.0841348!11761-123H6;0.189214!11842-124H6;0.0104083!11837-124H1;0.472117!10568-108B1;0.0455478!13230-141I8;0.179153!13231-141I9;0.125459!10696-109G3;0.0824907!10493-107B7;0.108603!10494-107B8;0.14966!10850-111F4;0.48405!10851-111F5;0.309198!10852-111F6;0.00125183!10853-111F7;0.777365!10854-111F8;0.403922!10855-111F9;0.351602!10856-111G1;0.728726!10847-111F1;0.532638!10846-111E9;0.200146!10848-111F2;0.41855!10845-111E8;0.885257!10857-111G2;0.151203!10858-111G3;0.359879!10156-103A3;0.0184633!11901-125F2;0.0228558!11902-125F3;0.024655!11903-125F4;0.0138013!10689-109F5;0.0397184!10648-109A9;0.562979!10784-110H1;0.521616!10744-110C6;0.154756!10772-110F7;0.0102459!10474-106I6;0.317898!10600-108E6;0.291953!10684-109E9;0.103185!12226-129F3;0.0553137!12227-129F4;0.827661!10508-107D4;0.48471!10539-107G8;0.990821!10607-108F4;0.676447!10555-107I6;0.309681!10774-110F9;0.664238!10637-108I7;0.733855!10663-109C6;0.606373!10728-110A8;0.968953!10729-110A9;0.529264!10430-106D7;0.0272425!10730-110B1;0.0073995!10813-111B3;0.713105!10812-111B2;0.410891!10037-101F1;0.862139!10172-103C1;0.0432492!10163-103B1;0.017692!10076-102A4;0.0358284!10073-102A1;0.024791!10036-101E9;0.380062!10195-103E6;0.0918204!10277-104E7;0.0321542!10434-106E2;0.528272!10550-107I1;0.132729!10545-107H5;0.324939!10544-107H4;0.726293!10704-109H2;0.255731!10510-107D6;0.866359!10558-107I9;0.0109401!10020-101D2;0.790057!10732-110B3;0.342112!10049-101G4;0.120434!10698-109G5;0.17534!10437-106E5;0.561018!10417-106C3;0.917427!10035-101E8;0.334111!10171-103B9;0.0334363!10157-103A4;0.0902644!10034-101E7;0.0299612!10072-101I9;0.0493526!10199-103F1;0.167052!10200-103F2;0.705269!10697-109G4;0.459283!10723-110A3;0.0449474!10179-103C8;0.234561!10160-103A7;0.0610743!10180-103C9;0.139724!10162-103A9;0.102143!10021-101D3;0.0339311!10840-111E3;0.473678!10706-109H4;0.131599!10033-101E6;0.928489!10032-101E5;0.0169984!10490-107B4;0.0482883!10439-106E7;0.0899188!10022-101D4;0.0621482!10176-103C5;0.944606!10469-106I1;0.0268232!10067-101I4;0.19006!10411-106B6;0.882511!10471-106I3;0.274252!10030-101E3;0.148722!10475-106I7;0.212319!10787-110H4;0.405531!10477-106I9;0.638777!10695-109G2;0.317662!11771-123I7;0.157856!11772-123I8;0.86612!11773-123I9;0.722337!10093-102C3;0.962721!10442-106F1;0.450702!10442-106F1;0.0210891!10201-103F3;0.0380062!10639-108I9;0.255365!11843-124H7;0.501352!11841-124H5;0.0539171!10693-109F9;0.0145443!10436-106E4;0.822319!10483-107A6;0.535421!10282-104F3;0.594831!10023-101D5;0.036635!10066-101I3;0.0292953!10065-101I2;0.0297262!10800-110I8;0.303173!10610-108F7;0.860521!10841-111E4;0.268839!10541-107H1;0.74914!10842-111E5;0.45564!10562-108A4;0.742734!10024-101D6;0.829148!10064-101I1;0.384913!10609-108F6;0.644009!10048-101G3;0.956154!10781-110G7;0.875975!10181-103D1;0.938871!10159-103A6;0.274956!10056-101H2;0.469556!10737-110B8;0.918991!10025-101D7;0.147568!10044-101F8;0.414752!10424-106D1;0.854039!10463-106H4;0.0611988!10616-108G4;0.0930851!10486-107A9;0.0652184!10062-101H8;0.921773!10202-103F4;0.21393!10158-103A5;0.316237!10441-106E9;0.141536!10031-101E4;0.234495!10063-101H9;0.0792239!10063-101H9;0.345144!11763-123H8;0.433606!11765-123I1;0.35406!11768-123I4;0.442372!10807-111A6;0.145462!10790-110H7;0.762109!10798-110I6;0.805735!10786-110H3;0.627366!10591-108D6;0.908506!10593-108D8;0.369825!10590-108D5;0.93987!10026-101D8;0.390232!10096-102C6;0.846902!10168-103B6;0.0415403!10154-103A1;0.0799177!10209-103G2;0.0404641!10061-101H7;0.440389!10027-101D9;0.166183!10043-101F7;0.0143345!10783-110G9;0.0708891!10028-101E1;0.884139!10060-101H6;0.684103!10203-103F5;0.484436!10059-101H5;0.165841!10047-101G2;0.115103!10029-101E2;0.720064!10058-101H4;0.324196!10418-106C4;0.49299!10492-107B6;0.483608!10694-109G1;0.755277!10797-110I5;0.0909643!10057-101H3;0.05451!10100-102D1;0.0832948!10055-101H1;0.31287!10204-103F6;0.968481!10191-103E2;0.347766!10563-108A5;0.532594
|name=motif218
|name=motif218
|tomtom_result=AZF1#MA0277.1;0;3.20341e-05;0.0152482;0.0304964;9;TTTTTTTTT;TTTCTTTTT;-!hb#MA0049.1;0;0.000861424;0.410038;0.410038;9;TTTTTTTTT;TTTTTTATGC;-!STAT1#MA0137.1;3;0.0048652;2.31584;0.995851;9;TTTTTTTTT;CAGTTTCATTTTCC;-!id1#MA0120.1;0;0.00554198;2.63798;0.995851;9;TTTTTTTTT;TTTTCCTTTTCG;+!Foxd3#MA0041.1;3;0.00748783;3.56421;0.995851;9;TTTTTTTTT;GAATGTTTGTTT;+!HMG-I/Y#MA0045.1;3;0.00778909;3.70761;0.995851;9;TTTTTTTTT;GTTTTTCCATTTGTTG;-!HCM1#MA0317.1;-1;0.00788079;3.75125;0.995851;8;TTTTTTTTT;TTGTTTAT;-!br_Z1#MA0010.1;2;0.0083685;3.98341;0.995851;9;TTTTTTTTT;GATTTGTCTATTAC;-!Klf4#MA0039.1;1;0.00970106;4.6177;1;9;TTTTTTTTT;CCTTCCTTTA;-!PEND#MA0127.1;1;0.0138268;6.58155;1;9;TTTTTTTTT;ACTTCTTATT;+!IRF1#MA0050.1;2;0.0143308;6.82148;1;9;TTTTTTTTT;GGTTTCACTTTC;-!br_Z4#MA0013.1;0;0.0159441;7.5894;1;9;TTTTTTTTT;TTTGTTTACTA;-!SFP1#MA0378.1;10;0.0168193;8.006;1;9;TTTTTTTTT;CCGTAGAAAATTTTTTTCAAT;-!squamosa#MA0082.1;1;0.0185122;8.81179;1;9;TTTTTTTTT;ATTTCCATTTTTGG;-
}}
}}

Latest revision as of 12:23, 7 September 2012

Full Name: motif218

Motif matrix
POACGT
0114741578104489571
0213462231156788523
0301358104391266
0412064225781498444041
0543876081316480035
0630505079345882080
0714903430154287205
0819114718228184757
098471523100090297

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
AZF1#MA0277.103.20341e-050.01524820.03049649TTTTTTTTTTTTCTTTTT-
hb#MA0049.100.0008614240.4100380.4100389TTTTTTTTTTTTTTTATGC-
STAT1#MA0137.130.00486522.315840.9958519TTTTTTTTTCAGTTTCATTTTCC-
id1#MA0120.100.005541982.637980.9958519TTTTTTTTTTTTTCCTTTTCG+
Foxd3#MA0041.130.007487833.564210.9958519TTTTTTTTTGAATGTTTGTTT+
HMG-I/Y#MA0045.130.007789093.707610.9958519TTTTTTTTTGTTTTTCCATTTGTTG-
HCM1#MA0317.1-10.007880793.751250.9958518TTTTTTTTTTTGTTTAT-
br_Z1#MA0010.120.00836853.983410.9958519TTTTTTTTTGATTTGTCTATTAC-
Klf4#MA0039.110.009701064.617719TTTTTTTTTCCTTCCTTTA-
PEND#MA0127.110.01382686.5815519TTTTTTTTTACTTCTTATT+
IRF1#MA0050.120.01433086.8214819TTTTTTTTTGGTTTCACTTTC-
br_Z4#MA0013.100.01594417.589419TTTTTTTTTTTTGTTTACTA-
SFP1#MA0378.1100.01681938.00619TTTTTTTTTCCGTAGAAAATTTTTTTCAAT-
squamosa#MA0082.110.01851228.8117919TTTTTTTTTATTTCCATTTTTGG-
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