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MacroAPE 1083:Motif CTNAGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;4128;0;0!02;0;0;0;4128!03;1032;1032;1032;1032!04;4128;0;0;0!05;0;0;4128;0!06;0;0;0;4128 |macroape_1083_sample_pvalues=11376-118A8;0.0078...")
 
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;0.063024!12176-128I7;0.0439655!12177-128I8;0.0306649!12182-129A4;0.0263289!12183-129A5;0.0541729!12184-129A6;0.055168!10809-111A8;0.0508896!10597-108E3;0.781793!10717-109I6;0.800729!10455-106G5;0.885268!10534-107G3;0.000869172!10429-106D6;0.00519445!10464-106H5;0.0331562!10827-111C8;0.017097!10789-110H6;0.0257336!10828-111C9;0.023246!10788-110H5;0.0770641!10792-110H9;0.0974516!10765-110E9;0.0157797!10829-111D1;0.0220704!10830-111D2;0.0399929!10831-111D3;0.0218648!10832-111D4;0.0161309!10833-111D5;0.00854159!10764-110E8;0.0147012!10770-110F5;0.00835558!10399-106A3;0.0266533!10400-106A4;0.0262504!10405-106A9;0.0519888!10834-111D6;0.0535335!10835-111D7;0.00779583!10836-111D8;0.126911!10837-111D9;0.18775!10699-109G6;0.0271248!10802-111A1;0.193262!10796-110I4;0.0689381!10010-101C1;0.466344!10810-111A9;0.113901!10421-106C7;0.18698!10708-109H6;0.0908263!12235-129G3;0.182828!12236-129G4;0.307432!12237-129G5;0.436909!10167-103B5;0.481852!10151-102I7;0.669944!10428-106D5;0.566548!10795-110I3;0.215284!10805-111A4;0.0110835!10052-101G7;0.194863!10189-103D9;0.0700988!10589-108D4;0.931777!10425-106D2;0.00161845!10427-106D4;0.769268!10702-109G9;0.0488459!10432-106D9;0.0257859!10496-107C1;0.699527!10718-109I7;0.967154!10011-101C2;0.0328268!10053-101G8;0.372975!10686-109F2;0.00852803!10084-102B3;0.214386!10012-101C3;0.988665!10085-102B4;0.745022!10482-107A5;0.577695!10419-106C5;0.332434!10080-102A8;0.238953!10760-110E4;0.320102!10709-109H7;0.821413!10710-109H8;0.636232!10703-109H1;0.220328!10719-109I8;0.00450268!10642-109A3;0.0359845!10177-103C6;0.0496716!10164-103B2;0.628167!10173-103C2;0.715246!10166-103B4;0.814668!10083-102B2;0.935417!10188-103D8;0.761537!10552-107I3;0.687723!10553-107I4;0.0351666!10013-101C4;0.31831!10536-107G5;0.165201!10618-108G6;0.697788!10423-106C9;0.678817!10785-110H2;0.453375!12238-129G6;0.343523!12239-129G7;0.39637!12240-129G8;5.46204e-05!10416-106C2;0.707599!10801-110I9;0.0026339!10766-110F1;0.118283!10824-111C5;0.105349!10825-111C6;0.165154!10826-111C7;0.13885!10454-106G4;0.178822!10409-106B4;0.0731689!10638-108I8;0.0333676!10636-108I6;0.291135!10513-107D9;0.665564!10420-106C6;0.292373!10082-102B1;0.0105378!10014-101C5;0.879401!10070-101I7;0.60406!10452-106G2;0.952546!10453-106G3;0.00944511!10449-106F8;0.00239566!10042-101F6;0.00246957!10069-101I6;0.551915!10193-103E4;0.634805!10631-108I1;0.893203!10438-106E6;3.65013e-05!10488-107B2;0.894406!10196-103E7;0.0502462!10071-101I8;0.712031!10071-101I8;0.624993!10041-101F5;0.728791!10451-106G1;0.219885!10450-106F9;0.00375265!10604-108F1;0.00525386!10605-108F2;0.888241!10606-108F3;0.941872!10603-108E9;0.80203!10497-107C2;0.853589!10448-106F7;0.862103!10643-109A4;0.830011!10426-106D3;0.663398!10431-106D8;0.710693!10197-103E8;0.831288!10443-106F2;0.541867!10815-111B5;0.274598!10816-111B6;0.124692!10817-111B7;0.136928!10015-101C6;0.173775!10410-106B5;0.312454!10054-101G9;0.763186!10758-110E2;0.471874!10711-109H9;0.873569!10040-101F4;0.904663!10470-106I2;0.879819!10415-106C1;0.361909!10198-103E9;0.211856!10614-108G2;0.259527!10612-108F9;0.215954!10549-107H9;0.77764!10615-108G3;0.201724!10487-107B1;0.00384399!10433-106E1;0.0669348!10688-109F4;0.711557!10444-106F3;0.901556!10444-106F3;0.660915!10485-107A8;0.808274!10413-106B8;0.856981!10175-103C4;0.841088!10161-103A8;0.703441!12131-128D7;0.51328!10624-108H3;0.286425!10712-109I1;0.112249!10205-103F7;0.00077067!10206-103F8;0.427054!10207-103F9;0.527779!10050-101G5;0.467747!10051-101G6;0.986648!10016-101C7;0.953431!10046-101G1;0.884474!10778-110G4;0.844354!10633-108I3;0.0012296!10818-111B8;0.249283!10819-111B9;0.115419!10820-111C1;0.0914309!10484-107A7;0.109802!10808-111A7;0.112145!10169-103B7;0.00212714!10153-102I9;0.667724!13425-144D5;0.520571!13433-144E4;0.0872435!13437-144E8;0.094522!11904-125F5;0.0870177!11905-125F6;0.611251!10039-101F3;0.789574!10791-110H8;0.817109!10017-101C8;0.701525!10045-101F9;0.431727!10509-107D5;0.302816!10839-111E2;0.200053!10692-109F8;0.804529!10079-102A7;0.429803!10078-102A6;0.721817!10721-110A1;0.767198!10569-108B2;0.843524!10570-108B3;0.0474643!10571-108B4;0.0706549!10647-109A8;0.0448278!10752-110D5;0.985109!10782-110G8;0.128475!10726-110A6;0.161463!10018-101C9;0.886382!10086-102B5;0.582637!10182-103D2;0.168359!10165-103B3;0.481662!10499-107C4;0.656219!10408-106B3;0.50552!10019-101D1;0.677951!10068-101I5;0.269858!10075-102A3;0.393775!10077-102A5;0.834421!10727-110A7;0.638545!10775-110G1;0.0222445!10412-106B7;0.00699299!12231-129F8;0.983243!12232-129F9;0.110515!12233-129G1;0.0442264!12234-129G2;0.0752904!10414-106B9;0.29784!10170-103B8;0.227942!10183-103D3;0.963502!10150-102I6;0.958186!10174-103C3;0.71354!10155-103A2;0.5206!10038-101F2;0.476264!10838-111E1;0.489169!10759-110E3;0.321922!10514-107E1;0.531222!10465-106H6;0.618977!10691-109F7;0.659195!10843-111E6;0.954585!10844-111E7;0.00146736!11747-123G1;0.011648!11748-123G2;0.0509775!11749-123G3;0.0102489!11750-123G4;0.0412085!11751-123G5;0.0370596!11840-124H4;0.0395569!11752-123G6;0.0445307!11753-123G7;0.0288709!11754-123G8;0.0119024!11755-123G9;0.0280123!11756-123H1;0.036302!11833-124G6;0.00132553!11760-123H5;0.00317554!11836-124G9;0.00136315!11758-123H3;0.027657!11835-124G8;0.00758315!11762-123H7;0.00751042!11838-124H2;0.0359587!11757-123H2;0.0158663!11759-123H4;0.00318327!11761-123H6;0.00580801!11842-124H6;0.00546456!11837-124H1;0.00148662!10568-108B1;0.0134849!13230-141I8;0.575239!13231-141I9;0.0362195!10696-109G3;0.0875897!10493-107B7;0.0622362!10494-107B8;0.663884!10850-111F4;0.5777!10851-111F5;0.69576!10852-111F6;0.671804!10853-111F7;0.0485391!10854-111F8;0.382791!10855-111F9;0.839124!10856-111G1;0.878241!10847-111F1;0.625939!10846-111E9;0.653448!10848-111F2;0.690722!10845-111E8;0.26983!10857-111G2;0.336645!10858-111G3;0.649579!10156-103A3;0.457537!11901-125F2;0.757885!11902-125F3;0.449378!11903-125F4;0.716004!10689-109F5;0.629121!10648-109A9;0.321107!10784-110H1;0.261098!10744-110C6;0.522273!10772-110F7;0.00769721!10474-106I6;0.0211514!10600-108E6;0.00736015!10684-109E9;0.25132!12226-129F3;0.88148!12227-129F4;0.45131!10508-107D4;0.0298842!10539-107G8;0.0547776!10607-108F4;0.125757!10555-107I6;0.0458388!10774-110F9;0.0273708!10637-108I7;0.0995348!10663-109C6;0.0210997!10728-110A8;0.412612!10729-110A9;0.412166!10430-106D7;0.00223904!10730-110B1;0.0197078!10813-111B3;0.00618978!10812-111B2;0.0244436!10037-101F1;0.00781425!10172-103C1;0.782563!10163-103B1;0.847719!10076-102A4;0.777094!10073-102A1;0.885755!10036-101E9;0.492228!10195-103E6;0.874714!10277-104E7;0.872356!10434-106E2;0.576798!10550-107I1;0.572896!10545-107H5;0.587534!10544-107H4;0.373538!10704-109H2;0.965659!10510-107D6;0.330955!10558-107I9;0.486406!10020-101D2;0.501096!10732-110B3;0.663471!10049-101G4;0.154335!10698-109G5;0.808452!10437-106E5;0.46539!10417-106C3;0.256141!10035-101E8;0.882714!10171-103B9;0.808051!10157-103A4;0.984332!10034-101E7;0.794736!10072-101I9;0.819732!10199-103F1;0.49193!10200-103F2;0.989607!10697-109G4;0.237405!10723-110A3;0.0223312!10179-103C8;0.425345!10160-103A7;0.888215!10180-103C9;0.985058!10162-103A9;0.479484!10021-101D3;0.726713!10840-111E3;0.298971!10706-109H4;0.00705935!10033-101E6;0.297394!10032-101E5;0.705249!10490-107B4;0.891154!10439-106E7;0.732242!10022-101D4;0.276205!10176-103C5;0.36895!10469-106I1;0.790408!10067-101I4;0.276608!10411-106B6;0.814051!10471-106I3;0.938564!10030-101E3;0.690209!10475-106I7;0.445229!10787-110H4;0.00443041!10477-106I9;0.33111!10695-109G2;0.324188!11771-123I7;0.0274039!11772-123I8;0.0892232!11773-123I9;0.0366824!10093-102C3;0.0239902!10442-106F1;0.985306!10442-106F1;0.803163!10201-103F3;0.552296!10639-108I9;0.802039!11843-124H7;0.302398!11841-124H5;0.967952!10693-109F9;0.707531!10436-106E4;0.979371!10483-107A6;0.371606!10282-104F3;0.702675!10023-101D5;0.851561!10066-101I3;0.660956!10065-101I2;0.523993!10800-110I8;0.343048!10610-108F7;0.00626988!10841-111E4;0.0369486!10541-107H1;0.156228!10842-111E5;0.00561182!10562-108A4;0.0317596!10024-101D6;0.0260944!10064-101I1;0.595332!10609-108F6;0.635678!10048-101G3;0.0430972!10781-110G7;0.580157!10181-103D1;0.13749!10159-103A6;0.622423!10056-101H2;0.444351!10737-110B8;0.506575!10025-101D7;0.0761353!10044-101F8;0.912717!10424-106D1;0.526335!10463-106H4;0.0456658!10616-108G4;0.842674!10486-107A9;0.187642!10062-101H8;0.770013!10202-103F4;0.395705!10158-103A5;0.941661!10441-106E9;0.563284!10031-101E4;0.0245802!10063-101H9;0.824806!10063-101H9;0.495552!11763-123H8;0.703445!11765-123I1;0.138109!11768-123I4;0.0441268!10807-111A6;0.0801484!10790-110H7;0.140224!10798-110I6;0.10582!10786-110H3;0.248146!10591-108D6;0.482975!10593-108D8;0.104782!10590-108D5;0.205762!10026-101D8;0.0582957!10096-102C6;0.751976!10168-103B6;0.317729!10154-103A1;0.701632!10209-103G2;0.639183!10061-101H7;0.475242!10027-101D9;0.262207!10043-101F7;0.278195!10783-110G9;0.909634!10028-101E1;0.940279!10060-101H6;0.205011!10203-103F5;0.13636!10059-101H5;0.33047!10047-101G2;0.424284!10029-101E2;0.645925!10058-101H4;0.131956!10418-106C4;0.232995!10492-107B6;0.945274!10694-109G1;0.645845!10797-110I5;0.0304789!10057-101H3;0.941606!10100-102D1;0.320767!10055-101H1;0.175384!10204-103F6;0.213173!10191-103E2;0.140481!10563-108A5;0.458714
|name=motif_CTNAGT
|name=motif_CTNAGT
|tomtom_result=NFE2L2#MA0150.1;2;0.000887374;0.42239;0.84478;6;CTAAGT;TGCTGAGTCAT;-!Nkx3-2#MA0122.1;0;0.00544076;2.5898;1;6;CTAAGT;TTAAGTGGA;+!Foxa2#MA0047.2;1;0.012116;5.76722;1;6;CTAAGT;CCTAAGTAAACA;-!FOXC1#MA0032.1;1;0.0156297;7.43973;1;6;CTAAGT;GGTAAGTA;+
}}
}}

Latest revision as of 12:12, 7 September 2012

Full Name: motif_CTNAGT

Motif matrix
POACGT
010412800
020004128
031032103210321032
044128000
050041280
060004128

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFE2L2#MA0150.120.0008873740.422390.844786CTAAGTTGCTGAGTCAT-
Nkx3-2#MA0122.100.005440762.589816CTAAGTTTAAGTGGA+
Foxa2#MA0047.210.0121165.7672216CTAAGTCCTAAGTAAACA-
FOXC1#MA0032.110.01562977.4397316CTAAGTGGTAAGTA+
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