FFCP PHASE1:Hg19::chr13:25746318..25746350,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:25746318..25746350,- | |id=chr13:25746318..25746350,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.73e-22;82!UBERON:0006241;1.56e-10;3!UBERON:0003057;1.56e-10;3!UBERON:0006215;1.65e-09;3!UBERON:0010122;2.23e-07;2 | |||
|ontology_enrichment_disease=DOID:171!1.37e-10!10 | |ontology_enrichment_disease=DOID:171!1.37e-10!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.95e-92!57;UBERON:0005068!8.95e-92!57;UBERON:0006241!8.95e-92!57;UBERON:0007135!8.95e-92!57;UBERON:0000073!5.43e-84!94;UBERON:0001016!5.43e-84!94;UBERON:0001017!7.08e-83!82;UBERON:0005743!2.71e-81!86;UBERON:0002616!1.87e-76!59;UBERON:0002346!4.04e-75!90;UBERON:0000955!1.82e-72!69;UBERON:0006238!1.82e-72!69;UBERON:0002780!1.61e-71!41;UBERON:0001890!1.61e-71!41;UBERON:0006240!1.61e-71!41;UBERON:0003080!1.34e-69!42;UBERON:0003075!2.38e-67!86;UBERON:0007284!2.38e-67!86;UBERON:0002020!5.60e-64!34;UBERON:0003528!5.60e-64!34;UBERON:0001893!6.26e-64!34;UBERON:0002791!1.11e-61!33;UBERON:0001869!8.85e-59!32;UBERON:0003056!1.77e-50!61;UBERON:0007023!8.28e-50!115;UBERON:0002619!5.63e-49!22;UBERON:0000924!1.86e-47!173;UBERON:0006601!1.86e-47!173;UBERON:0001950!2.69e-44!20;UBERON:0000956!1.48e-42!25;UBERON:0000203!1.48e-42!25;UBERON:0004121!6.19e-42!169;UBERON:0000033!8.16e-39!123;UBERON:0000153!2.14e-36!129;UBERON:0007811!2.14e-36!129;UBERON:0002308!5.78e-23!9;UBERON:0000125!5.78e-23!9;UBERON:0002420!1.01e-22!9;UBERON:0007245!1.01e-22!9;UBERON:0010009!1.01e-22!9;UBERON:0010011!1.01e-22!9;UBERON:0000454!1.01e-22!9;UBERON:0003076!4.79e-22!15;UBERON:0003057!4.79e-22!15;UBERON:0000025!5.62e-19!194;UBERON:0009663!3.31e-18!7;UBERON:0004732!6.27e-18!13;UBERON:0004733!1.35e-15!12;UBERON:0002028!1.35e-15!12;UBERON:0007277!1.35e-15!12;UBERON:0002298!1.59e-15!8;UBERON:0000200!1.64e-15!6;UBERON:0001871!1.85e-15!7;UBERON:0000349!4.44e-13!5;UBERON:0004111!8.31e-13!241;UBERON:0001872!8.49e-13!5;UBERON:0002021!8.49e-13!5;UBERON:0000064!2.43e-12!219;UBERON:0000369!1.21e-10!4;UBERON:0002435!1.21e-10!4;UBERON:0000204!1.21e-10!4;UBERON:0010082!1.21e-10!4;UBERON:0000483!2.65e-10!309;UBERON:0000119!4.45e-10!312;UBERON:0000477!1.44e-09!286;UBERON:0002680!1.47e-09!9;UBERON:0001895!1.47e-09!9;UBERON:0010092!1.47e-09!9;UBERON:0001894!3.76e-09!7;UBERON:0006222!3.76e-09!7;UBERON:0002771!4.71e-09!3;UBERON:0006331!4.96e-09!3;UBERON:0000988!1.20e-08!3;UBERON:0002240!1.43e-08!3;UBERON:0000475!2.13e-08!365;UBERON:0001896!2.14e-08!3;UBERON:0005290!2.14e-08!3;UBERON:0010096!2.14e-08!3;UBERON:0005383!2.25e-08!3;UBERON:0005382!2.25e-08!3;UBERON:0005162!8.39e-07!2;UBERON:0000122!8.39e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!8.95e-92!57;UBERON:0005068!8.95e-92!57;UBERON:0006241!8.95e-92!57;UBERON:0007135!8.95e-92!57;UBERON:0000073!5.43e-84!94;UBERON:0001016!5.43e-84!94;UBERON:0001017!7.08e-83!82;UBERON:0005743!2.71e-81!86;UBERON:0002616!1.87e-76!59;UBERON:0002346!4.04e-75!90;UBERON:0000955!1.82e-72!69;UBERON:0006238!1.82e-72!69;UBERON:0002780!1.61e-71!41;UBERON:0001890!1.61e-71!41;UBERON:0006240!1.61e-71!41;UBERON:0003080!1.34e-69!42;UBERON:0003075!2.38e-67!86;UBERON:0007284!2.38e-67!86;UBERON:0002020!5.60e-64!34;UBERON:0003528!5.60e-64!34;UBERON:0001893!6.26e-64!34;UBERON:0002791!1.11e-61!33;UBERON:0001869!8.85e-59!32;UBERON:0003056!1.77e-50!61;UBERON:0007023!8.28e-50!115;UBERON:0002619!5.63e-49!22;UBERON:0000924!1.86e-47!173;UBERON:0006601!1.86e-47!173;UBERON:0001950!2.69e-44!20;UBERON:0000956!1.48e-42!25;UBERON:0000203!1.48e-42!25;UBERON:0004121!6.19e-42!169;UBERON:0000033!8.16e-39!123;UBERON:0000153!2.14e-36!129;UBERON:0007811!2.14e-36!129;UBERON:0002308!5.78e-23!9;UBERON:0000125!5.78e-23!9;UBERON:0002420!1.01e-22!9;UBERON:0007245!1.01e-22!9;UBERON:0010009!1.01e-22!9;UBERON:0010011!1.01e-22!9;UBERON:0000454!1.01e-22!9;UBERON:0003076!4.79e-22!15;UBERON:0003057!4.79e-22!15;UBERON:0000025!5.62e-19!194;UBERON:0009663!3.31e-18!7;UBERON:0004732!6.27e-18!13;UBERON:0004733!1.35e-15!12;UBERON:0002028!1.35e-15!12;UBERON:0007277!1.35e-15!12;UBERON:0002298!1.59e-15!8;UBERON:0000200!1.64e-15!6;UBERON:0001871!1.85e-15!7;UBERON:0000349!4.44e-13!5;UBERON:0004111!8.31e-13!241;UBERON:0001872!8.49e-13!5;UBERON:0002021!8.49e-13!5;UBERON:0000064!2.43e-12!219;UBERON:0000369!1.21e-10!4;UBERON:0002435!1.21e-10!4;UBERON:0000204!1.21e-10!4;UBERON:0010082!1.21e-10!4;UBERON:0000483!2.65e-10!309;UBERON:0000119!4.45e-10!312;UBERON:0000477!1.44e-09!286;UBERON:0002680!1.47e-09!9;UBERON:0001895!1.47e-09!9;UBERON:0010092!1.47e-09!9;UBERON:0001894!3.76e-09!7;UBERON:0006222!3.76e-09!7;UBERON:0002771!4.71e-09!3;UBERON:0006331!4.96e-09!3;UBERON:0000988!1.20e-08!3;UBERON:0002240!1.43e-08!3;UBERON:0000475!2.13e-08!365;UBERON:0001896!2.14e-08!3;UBERON:0005290!2.14e-08!3;UBERON:0010096!2.14e-08!3;UBERON:0005383!2.25e-08!3;UBERON:0005382!2.25e-08!3;UBERON:0005162!8.39e-07!2;UBERON:0000122!8.39e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.51e-69;34!UBERON:0003528;1.93e-68;34!UBERON:0002020;1.93e-68;34!UBERON:0002791;3.11e-67;32!UBERON:0001869;6.74e-67;32!UBERON:0002619;2.41e-62;22!UBERON:0002780;4.95e-62;41!UBERON:0001890;4.95e-62;41!UBERON:0000073;5.63e-60;53!UBERON:0002616;5.63e-60;53!UBERON:0001950;2.42e-56;20!UBERON:0000956;1.88e-54;25!UBERON:0000203;1.88e-54;25!UBERON:0000955;3.37e-40;68!UBERON:0001017;2.20e-39;75!UBERON:0001016;1.53e-36;83!UBERON:0000125;6.51e-29;9!UBERON:0002308;6.51e-29;9!UBERON:0002420;1.33e-28;9!UBERON:0007245;1.33e-28;9!UBERON:0010009;1.33e-28;9!UBERON:0010011;1.33e-28;9!UBERON:0000454;1.33e-28;9!UBERON:0009663;7.70e-23;7!UBERON:0004732;9.85e-23;13!UBERON:0004733;9.61e-20;12!UBERON:0002028;9.61e-20;12!UBERON:0000200;2.23e-19;6!UBERON:0002298;4.03e-19;6!UBERON:0007023;1.26e-16;114!UBERON:0001871;2.61e-16;6!UBERON:0000349;2.90e-16;5!UBERON:0001872;6.12e-16;5!UBERON:0002021;6.63e-16;5!UBERON:0011216;1.67e-13;132!UBERON:0000369;3.61e-13;4!UBERON:0002435;3.61e-13;4!UBERON:0000204;3.61e-13;4!UBERON:0002680;5.11e-12;9!UBERON:0001895;5.11e-12;9!UBERON:0000988;1.41e-10;3!UBERON:0002240;1.56e-10;3!UBERON:0005174;1.56e-10;3!UBERON:0001137;1.56e-10;3!UBERON:0001870;1.77e-10;3!UBERON:0001896;2.87e-10;3!UBERON:0005383;2.87e-10;3!UBERON:0005290;2.87e-10;3!UBERON:0005382;2.87e-10;3!UBERON:0010314;8.46e-10;132!UBERON:0005162;2.98e-08;2!UBERON:0000122;2.98e-08;2!UBERON:0001897;3.85e-08;2!UBERON:0010225;3.85e-08;2!UBERON:0001875;4.12e-08;2!UBERON:0006514;4.12e-08;2!UBERON:0002784;5.01e-08;4!UBERON:0002771;6.40e-08;2!UBERON:0001894;7.07e-08;7!UBERON:0002148;8.93e-08;2!UBERON:0006331;8.93e-08;2!UBERON:0009662;8.93e-08;2!UBERON:0003714;1.22e-07;2!UBERON:0002346;1.26e-07;4!UBERON:0000923;1.26e-07;4!UBERON:0010316;1.26e-07;4!UBERON:0005291;1.26e-07;4!UBERON:0001954;1.39e-07;2!UBERON:0003022;1.39e-07;2!UBERON:0002421;1.39e-07;2!UBERON:0002600;1.39e-07;2!UBERON:0002702;1.56e-07;2!UBERON:0001876;1.84e-07;2!UBERON:0001873;2.23e-07;2!UBERON:0004121;2.77e-07;165 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94702919869853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,29.3999080297972,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,16.4786566836187,24.8618503073761,0,2.60427761085233,0,0,0,0,0,0.344743373241465,2.04123229368278,0,13.2861207872076,17.8482729165604,3.05163472634166,5.19722521676756,5.6154047601174,8.7754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.417687798021821,51.4944655972373,0,44.5102446878144,0,0,0,0,0,2.75465485467441,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.677942222341597,0,0,18.6133740110283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8243767451678,75.5717691483802,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1332156573302,35.6852924012328,0,0,0,0,0,13.3649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7460286724248,35.7028024705263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.97461361970287,22.0867539472553,41.3130071331449,7.45431954397093,29.8399148634133,15.8966791529942,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.6991604723471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,1.18812770967818,6.80239744325385,59.9849099013571,7.26238393365217,0,0.0788617450012534,0,0,0,17.7914953517193,8.5017945795351,43.260775804488,21.3321018810385,3.27693205088234,12.1716764337023,28.0967623399421,88.5170405606757,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3049041698237,19.5269524653462,32.4498270506859,15.663705117895,2.18789923607288,0,0,0.175871244359621,0,1.60710550763486,0.672567444437648,0,0,0.0887023701626388,0,0,13.6619163283432,15.259283466581,0,0,0,16.4971369411802,0,0,0,0,0.142953088353313,26.7043003828308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.4686455116091,0,0,0,0,0,0,31.2130462712763,27.9223616307461,8.0304588240846,0,0,0,0,0,0,0,0,0,88.4405228044455,0,19.3775747044107,4.36350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1667775783512,101.364335944657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94702919869853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,29.3999080297972,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,16.4786566836187,24.8618503073761,0,2.60427761085233,0,0,0,0,0,0.344743373241465,2.04123229368278,0,13.2861207872076,17.8482729165604,3.05163472634166,5.19722521676756,5.6154047601174,8.7754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.417687798021821,51.4944655972373,0,44.5102446878144,0,0,0,0,0,2.75465485467441,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.677942222341597,0,0,18.6133740110283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8243767451678,75.5717691483802,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1332156573302,35.6852924012328,0,0,0,0,0,13.3649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7460286724248,35.7028024705263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.97461361970287,22.0867539472553,41.3130071331449,7.45431954397093,29.8399148634133,15.8966791529942,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.6991604723471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,1.18812770967818,6.80239744325385,59.9849099013571,7.26238393365217,0,0.0788617450012534,0,0,0,17.7914953517193,8.5017945795351,43.260775804488,21.3321018810385,3.27693205088234,12.1716764337023,28.0967623399421,88.5170405606757,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3049041698237,19.5269524653462,32.4498270506859,15.663705117895,2.18789923607288,0,0,0.175871244359621,0,1.60710550763486,0.672567444437648,0,0,0.0887023701626388,0,0,13.6619163283432,15.259283466581,0,0,0,16.4971369411802,0,0,0,0,0.142953088353313,26.7043003828308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.4686455116091,0,0,0,0,0,0,31.2130462712763,27.9223616307461,8.0304588240846,0,0,0,0,0,0,0,0,0,88.4405228044455,0,19.3775747044107,4.36350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1667775783512,101.364335944657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@FAM123A | |short_description=p3@FAM123A | ||
}} | }} |
Revision as of 11:54, 12 August 2012
Short description: | p3@FAM123A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM123A_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -13bp_to_uc001uqc.2_5end |
EntrezGene: | FAM123A |
HGNC: | 26360 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.