FFCP PHASE1:Hg19::chr4:47033345..47033367,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:47033345..47033367,+ | |id=chr4:47033345..47033367,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.34e-20;3!UBERON:0006601;4.45e-13;82!UBERON:0006222;2.17e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.73e-82!57;UBERON:0005068!8.73e-82!57;UBERON:0006241!8.73e-82!57;UBERON:0007135!8.73e-82!57;UBERON:0001017!6.38e-79!82;UBERON:0005743!1.01e-77!86;UBERON:0000073!4.77e-72!94;UBERON:0001016!4.77e-72!94;UBERON:0002616!2.79e-71!59;UBERON:0000955!6.56e-71!69;UBERON:0006238!6.56e-71!69;UBERON:0002780!1.02e-63!41;UBERON:0001890!1.02e-63!41;UBERON:0006240!1.02e-63!41;UBERON:0003075!1.63e-63!86;UBERON:0007284!1.63e-63!86;UBERON:0003080!5.28e-62!42;UBERON:0002346!3.98e-60!90;UBERON:0002020!6.71e-60!34;UBERON:0003528!6.71e-60!34;UBERON:0001893!7.84e-60!34;UBERON:0002791!2.81e-57!33;UBERON:0001869!1.36e-55!32;UBERON:0003056!9.71e-51!61;UBERON:0000033!4.26e-44!123;UBERON:0002619!4.64e-44!22;UBERON:0007023!3.30e-43!115;UBERON:0000153!1.92e-41!129;UBERON:0007811!1.92e-41!129;UBERON:0004121!6.36e-39!169;UBERON:0001950!9.08e-39!20;UBERON:0000956!2.76e-38!25;UBERON:0000203!2.76e-38!25;UBERON:0000924!1.07e-37!173;UBERON:0006601!1.07e-37!173;UBERON:0002420!7.27e-24!9;UBERON:0007245!7.27e-24!9;UBERON:0010009!7.27e-24!9;UBERON:0010011!7.27e-24!9;UBERON:0000454!7.27e-24!9;UBERON:0002308!1.38e-23!9;UBERON:0000125!1.38e-23!9;UBERON:0003076!7.28e-20!15;UBERON:0003057!7.28e-20!15;UBERON:0009663!8.37e-19!7;UBERON:0000025!9.66e-19!194;UBERON:0004733!3.10e-17!12;UBERON:0002028!3.10e-17!12;UBERON:0007277!3.10e-17!12;UBERON:0000200!5.71e-17!6;UBERON:0001871!1.29e-16!7;UBERON:0004732!9.26e-16!13;UBERON:0002298!2.39e-15!8;UBERON:0000349!7.48e-15!5;UBERON:0004111!2.51e-14!241;UBERON:0000064!4.65e-14!219;UBERON:0000483!5.29e-14!309;UBERON:0000477!7.98e-14!286;UBERON:0000119!9.82e-14!312;UBERON:0000369!3.48e-12!4;UBERON:0002435!3.48e-12!4;UBERON:0000204!3.48e-12!4;UBERON:0010082!3.48e-12!4;UBERON:0002680!8.18e-11!9;UBERON:0001895!8.18e-11!9;UBERON:0010092!8.18e-11!9;UBERON:0000475!2.14e-10!365;UBERON:0005383!1.79e-09!3;UBERON:0005382!1.79e-09!3;UBERON:0002771!2.05e-09!3;UBERON:0001872!2.86e-09!5;UBERON:0000481!7.31e-09!347;UBERON:0000988!9.57e-09!3;UBERON:0001896!1.06e-08!3;UBERON:0005290!1.06e-08!3;UBERON:0010096!1.06e-08!3;UBERON:0002021!1.33e-08!5;UBERON:0006331!1.99e-08!3;UBERON:0000062!1.28e-07!511;UBERON:0001954!4.62e-07!2;UBERON:0003022!4.62e-07!2;UBERON:0002421!4.62e-07!2;UBERON:0002600!4.62e-07!2;UBERON:0001870!6.87e-07!2;UBERON:0001876!9.59e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!8.73e-82!57;UBERON:0005068!8.73e-82!57;UBERON:0006241!8.73e-82!57;UBERON:0007135!8.73e-82!57;UBERON:0001017!6.38e-79!82;UBERON:0005743!1.01e-77!86;UBERON:0000073!4.77e-72!94;UBERON:0001016!4.77e-72!94;UBERON:0002616!2.79e-71!59;UBERON:0000955!6.56e-71!69;UBERON:0006238!6.56e-71!69;UBERON:0002780!1.02e-63!41;UBERON:0001890!1.02e-63!41;UBERON:0006240!1.02e-63!41;UBERON:0003075!1.63e-63!86;UBERON:0007284!1.63e-63!86;UBERON:0003080!5.28e-62!42;UBERON:0002346!3.98e-60!90;UBERON:0002020!6.71e-60!34;UBERON:0003528!6.71e-60!34;UBERON:0001893!7.84e-60!34;UBERON:0002791!2.81e-57!33;UBERON:0001869!1.36e-55!32;UBERON:0003056!9.71e-51!61;UBERON:0000033!4.26e-44!123;UBERON:0002619!4.64e-44!22;UBERON:0007023!3.30e-43!115;UBERON:0000153!1.92e-41!129;UBERON:0007811!1.92e-41!129;UBERON:0004121!6.36e-39!169;UBERON:0001950!9.08e-39!20;UBERON:0000956!2.76e-38!25;UBERON:0000203!2.76e-38!25;UBERON:0000924!1.07e-37!173;UBERON:0006601!1.07e-37!173;UBERON:0002420!7.27e-24!9;UBERON:0007245!7.27e-24!9;UBERON:0010009!7.27e-24!9;UBERON:0010011!7.27e-24!9;UBERON:0000454!7.27e-24!9;UBERON:0002308!1.38e-23!9;UBERON:0000125!1.38e-23!9;UBERON:0003076!7.28e-20!15;UBERON:0003057!7.28e-20!15;UBERON:0009663!8.37e-19!7;UBERON:0000025!9.66e-19!194;UBERON:0004733!3.10e-17!12;UBERON:0002028!3.10e-17!12;UBERON:0007277!3.10e-17!12;UBERON:0000200!5.71e-17!6;UBERON:0001871!1.29e-16!7;UBERON:0004732!9.26e-16!13;UBERON:0002298!2.39e-15!8;UBERON:0000349!7.48e-15!5;UBERON:0004111!2.51e-14!241;UBERON:0000064!4.65e-14!219;UBERON:0000483!5.29e-14!309;UBERON:0000477!7.98e-14!286;UBERON:0000119!9.82e-14!312;UBERON:0000369!3.48e-12!4;UBERON:0002435!3.48e-12!4;UBERON:0000204!3.48e-12!4;UBERON:0010082!3.48e-12!4;UBERON:0002680!8.18e-11!9;UBERON:0001895!8.18e-11!9;UBERON:0010092!8.18e-11!9;UBERON:0000475!2.14e-10!365;UBERON:0005383!1.79e-09!3;UBERON:0005382!1.79e-09!3;UBERON:0002771!2.05e-09!3;UBERON:0001872!2.86e-09!5;UBERON:0000481!7.31e-09!347;UBERON:0000988!9.57e-09!3;UBERON:0001896!1.06e-08!3;UBERON:0005290!1.06e-08!3;UBERON:0010096!1.06e-08!3;UBERON:0002021!1.33e-08!5;UBERON:0006331!1.99e-08!3;UBERON:0000062!1.28e-07!511;UBERON:0001954!4.62e-07!2;UBERON:0003022!4.62e-07!2;UBERON:0002421!4.62e-07!2;UBERON:0002600!4.62e-07!2;UBERON:0001870!6.87e-07!2;UBERON:0001876!9.59e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.14e-65;34!UBERON:0002020;2.14e-65;34!UBERON:0001869;9.60e-65;32!UBERON:0002791;4.67e-59;32!UBERON:0002619;2.31e-58;22!UBERON:0001893;1.59e-57;34!UBERON:0000956;2.75e-51;25!UBERON:0000203;2.75e-51;25!UBERON:0002780;1.27e-50;41!UBERON:0001890;1.27e-50;41!UBERON:0001950;1.09e-47;20!UBERON:0000073;7.21e-46;53!UBERON:0002616;7.21e-46;53!UBERON:0000200;3.07e-37;6!UBERON:0000955;3.19e-33;68!UBERON:0001017;1.93e-28;75!UBERON:0000125;5.48e-25;9!UBERON:0002308;5.48e-25;9!UBERON:0001016;5.26e-22;83!UBERON:0000349;2.14e-21;5!UBERON:0001872;7.76e-20;5!UBERON:0001870;1.13e-19;3!UBERON:0004733;2.63e-18;12!UBERON:0002028;2.63e-18;12!UBERON:0002420;4.36e-18;9!UBERON:0007245;4.36e-18;9!UBERON:0010009;4.36e-18;9!UBERON:0010011;4.36e-18;9!UBERON:0000454;4.36e-18;9!UBERON:0002680;2.16e-17;9!UBERON:0001895;2.16e-17;9!UBERON:0004732;7.33e-17;13!UBERON:0000369;1.06e-15;4!UBERON:0002435;1.06e-15;4!UBERON:0000204;1.06e-15;4!UBERON:0009663;3.62e-15;7!UBERON:0001871;9.55e-15;6!UBERON:0001954;3.99e-14;2!UBERON:0003022;3.99e-14;2!UBERON:0002421;3.99e-14;2!UBERON:0002600;3.99e-14;2!UBERON:0007023;4.44e-14;114!UBERON:0002771;1.05e-13;2!UBERON:0002702;1.05e-13;2!UBERON:0002148;4.19e-13;2!UBERON:0006331;4.19e-13;2!UBERON:0009662;4.19e-13;2!UBERON:0002037;2.63e-10;6!UBERON:0005383;6.18e-10;3!UBERON:0005382;6.18e-10;3!UBERON:0002298;1.16e-09;6!UBERON:0011216;2.09e-09;132!UBERON:0000988;4.92e-09;3!UBERON:0001874;4.57e-08;1!UBERON:0001882;5.05e-08;1!UBERON:0005403;5.05e-08;1!UBERON:0002022;6.58e-08;1!UBERON:0003112;6.58e-08;1!UBERON:0011158;6.58e-08;1!UBERON:0003128;6.58e-08;1!UBERON:0001703;6.58e-08;1!UBERON:0002241;6.58e-08;1!UBERON:0007190;1.07e-07;1!UBERON:0002581;2.17e-07;1!UBERON:0010314;3.33e-07;132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,4.3607519087259,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,2.22643435588443,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,7.83876851065152,3.05163472634166,3.87027409759286,2.95547618953547,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0.471807930864739,0,1.87411556580271,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9756074099263,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.313808538937,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0,0.470284307407084,0,0,0,0,0,0,0,3.97614844904652,3.94989877723569,0,0,0,0,0,3.52347428616543,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.3184990331373,2.50381861413,0.573409195690071,0.998361463831671,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,0,0,0,0,0,4.30335808146279,0,0.478901577171454,1.02558182120378,0.504143392443436,0.96820153449905,3.87541549516443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43135304626221,2.34323429584154,1.86018116851066,1.26831620387814,0,0,0,0,0,0,0.336283722218824,0,1.59363533945908,0,0,0,0.747667062745149,1.18390992413128,0,0,0,5.65616123697607,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79055697645231,0,0,0.109940516745429,0,0,0,0,0,0,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.76777874496378,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,4.3607519087259,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,2.22643435588443,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,7.83876851065152,3.05163472634166,3.87027409759286,2.95547618953547,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0.471807930864739,0,1.87411556580271,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9756074099263,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.313808538937,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0,0.470284307407084,0,0,0,0,0,0,0,3.97614844904652,3.94989877723569,0,0,0,0,0,3.52347428616543,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.3184990331373,2.50381861413,0.573409195690071,0.998361463831671,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,0,0,0,0,0,4.30335808146279,0,0.478901577171454,1.02558182120378,0.504143392443436,0.96820153449905,3.87541549516443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43135304626221,2.34323429584154,1.86018116851066,1.26831620387814,0,0,0,0,0,0,0.336283722218824,0,1.59363533945908,0,0,0,0.747667062745149,1.18390992413128,0,0,0,5.65616123697607,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79055697645231,0,0,0.109940516745429,0,0,0,0,0,0,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.76777874496378,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@GABRB1 | |short_description=p3@GABRB1 | ||
}} | }} |
Revision as of 03:13, 11 August 2012
Short description: | p3@GABRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GABRB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_ENST00000295454_5end |
EntrezGene: | GABRB1 |
HGNC: | 4081 |
UniProt: | P18505 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.