FFCP PHASE1:Hg19::chr5:57877953..57877971,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
Line 7: | Line 7: | ||
|description=CAGE_peak_5_at_RAB3C_5end | |description=CAGE_peak_5_at_RAB3C_5end | ||
|id=chr5:57877953..57877971,+ | |id=chr5:57877953..57877971,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002274!9.19e-08!5;CL:0000457!9.19e-08!5;CL:0002191!9.19e-08!5;CL:0000097!9.19e-08!5;CL:0000831!9.19e-08!5;CL:0002028!9.19e-08!5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON: | |ontology_enrichment_uberon=UBERON:0001049!1.06e-55!57;UBERON:0005068!1.06e-55!57;UBERON:0006241!1.06e-55!57;UBERON:0007135!1.06e-55!57;UBERON:0007023!5.80e-53!115;UBERON:0003080!3.12e-48!42;UBERON:0001017!1.37e-47!82;UBERON:0002780!4.82e-47!41;UBERON:0001890!4.82e-47!41;UBERON:0006240!4.82e-47!41;UBERON:0005743!3.75e-46!86;UBERON:0002616!1.32e-45!59;UBERON:0000073!8.49e-45!94;UBERON:0001016!8.49e-45!94;UBERON:0000955!8.96e-42!69;UBERON:0006238!8.96e-42!69;UBERON:0002020!1.06e-40!34;UBERON:0003528!1.06e-40!34;UBERON:0001893!4.05e-40!34;UBERON:0003075!5.19e-39!86;UBERON:0007284!5.19e-39!86;UBERON:0002791!8.90e-39!33;UBERON:0001869!5.61e-38!32;UBERON:0002346!6.63e-38!90;UBERON:0002619!4.18e-33!22;UBERON:0003056!2.27e-32!61;UBERON:0001950!2.82e-30!20;UBERON:0000956!2.58e-28!25;UBERON:0000203!2.58e-28!25;UBERON:0000033!2.04e-19!123;UBERON:0004121!5.70e-19!169;UBERON:0000924!7.44e-19!173;UBERON:0006601!7.44e-19!173;UBERON:0000153!1.07e-18!129;UBERON:0007811!1.07e-18!129;UBERON:0000025!3.81e-18!194;UBERON:0004111!1.83e-14!241;UBERON:0002308!7.95e-14!9;UBERON:0000125!7.95e-14!9;UBERON:0002420!9.38e-14!9;UBERON:0007245!9.38e-14!9;UBERON:0010009!9.38e-14!9;UBERON:0010011!9.38e-14!9;UBERON:0000454!9.38e-14!9;UBERON:0001871!2.14e-12!7;UBERON:0002298!4.38e-12!8;UBERON:0009663!7.11e-11!7;UBERON:0000200!8.15e-10!6;UBERON:0000477!1.10e-09!286;UBERON:0003076!2.75e-09!15;UBERON:0003057!2.75e-09!15;UBERON:0001872!1.01e-08!5;UBERON:0000349!1.24e-08!5;UBERON:0001894!3.26e-08!7;UBERON:0006222!3.26e-08!7;UBERON:0002021!5.28e-08!5;UBERON:0000483!1.54e-07!309;UBERON:0000369!2.66e-07!4;UBERON:0002435!2.66e-07!4;UBERON:0000204!2.66e-07!4;UBERON:0010082!2.66e-07!4;UBERON:0000119!2.67e-07!312 | ||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,1.00416183829401,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.264145302039678,2.28060927094849,3.17063897517315,0.88369703398466,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52362600021443,0,0,2.12923118845163,0,0.614481528616916,0.671028323677248,0.500547425135725,0.19538809540204,0,0,0.811367035427949,0,0,0,0.586032717087576,0,0,0,0,0,0,2.98244294329889,2.39138007897872,0,0,0,0.19924798825107,0.552567831062295,1.51159648712566,0,0,0,0,0,0,0.295930216910801,0,0,1.93866549219044,1.85536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,3.54296554325536,2.05013945663194,0,0.663475559587348,0,2.19385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.208843899010911,0.539209063845416,0,3.04543779442941,0,0,0,0,2.41981432097328,0.61214552326098,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,2.34249945036751,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,4.80336230967832,0.547621515567972,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,5.56660782866512,1.0896272488926,1.12527203925513,1.2378549293751,2.07720169014593,0,0,2.73373004961111,0,0,0.0524545881349981,0,2.33073541132698,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,4.78346938537737,2.38018683136842,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,4.43034089983493,4.6369980662746,2.003054891304,3.44045517414043,0.776503360757966,1.4903136705932,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0.127894371303652,1.94084660514027,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,1.92687675289379,2.8339315265117,2.07524016774297,2.05116364240755,0.504143392443436,0.899044282034833,2.74508597574147,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,1.82351478469666,3.90539049306924,2.06686796501184,2.28296916698065,4.92277328116398,0,0,0.175871244359621,0,1.60710550763486,0,7.28358725083958,2.50428410486427,0,0.115233987555779,0,3.46645638181842,1.44700101838268,0,0,0,3.45654297815204,0,0.913158720509496,0,0,0.214429632529969,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,5.61454712309054,0,0,0,0.219881033490858,0.150962843566674,0.154348316215889,0.218559560503957,0.940634592723046,0.245148321753905,2.82811856521951,4.3187862765288,1.18818560130834,4.6492130034174,0,0,0,0,0,0,0,0.730336388246517,0,0.430018749454354,0,1.63179576458195,1.74540276136151,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,9.95003327350535,0.20686599172379,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.402547587182052,0 | |phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,1.00416183829401,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.264145302039678,2.28060927094849,3.17063897517315,0.88369703398466,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52362600021443,0,0,2.12923118845163,0,0.614481528616916,0.671028323677248,0.500547425135725,0.19538809540204,0,0,0.811367035427949,0,0,0,0.586032717087576,0,0,0,0,0,0,2.98244294329889,2.39138007897872,0,0,0,0.19924798825107,0.552567831062295,1.51159648712566,0,0,0,0,0,0,0.295930216910801,0,0,1.93866549219044,1.85536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,3.54296554325536,2.05013945663194,0,0.663475559587348,0,2.19385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.208843899010911,0.539209063845416,0,3.04543779442941,0,0,0,0,2.41981432097328,0.61214552326098,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,2.34249945036751,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,4.80336230967832,0.547621515567972,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,5.56660782866512,1.0896272488926,1.12527203925513,1.2378549293751,2.07720169014593,0,0,2.73373004961111,0,0,0.0524545881349981,0,2.33073541132698,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,4.78346938537737,2.38018683136842,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,4.43034089983493,4.6369980662746,2.003054891304,3.44045517414043,0.776503360757966,1.4903136705932,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0.127894371303652,1.94084660514027,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,1.92687675289379,2.8339315265117,2.07524016774297,2.05116364240755,0.504143392443436,0.899044282034833,2.74508597574147,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,1.82351478469666,3.90539049306924,2.06686796501184,2.28296916698065,4.92277328116398,0,0,0.175871244359621,0,1.60710550763486,0,7.28358725083958,2.50428410486427,0,0.115233987555779,0,3.46645638181842,1.44700101838268,0,0,0,3.45654297815204,0,0.913158720509496,0,0,0.214429632529969,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,5.61454712309054,0,0,0,0.219881033490858,0.150962843566674,0.154348316215889,0.218559560503957,0.940634592723046,0.245148321753905,2.82811856521951,4.3187862765288,1.18818560130834,4.6492130034174,0,0,0,0,0,0,0,0.730336388246517,0,0.430018749454354,0,1.63179576458195,1.74540276136151,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,9.95003327350535,0.20686599172379,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.402547587182052,0 | ||
|short_description=p5@RAB3C | |short_description=p5@RAB3C | ||
}} | }} |
Revision as of 03:42, 5 August 2012
Short description: | p5@RAB3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RAB3C_5end |
Coexpression cluster: | C4507_large_thalamus_small_pituitary_medial_Mast_locus |
Association with transcript: | -76bp_to_ENST00000513316_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.