UBERON:0007329: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 4: | Line 4: | ||
|namespace= | |namespace= | ||
|def="A duct that is part of the pancreas and connected to the duodenum." [UBERON:cjm, Wikipedia:Pancreatic_duct] | |def="A duct that is part of the pancreas and connected to the duodenum." [UBERON:cjm, Wikipedia:Pancreatic_duct] | ||
|xref=EHDAA:9194;;FMA:10419;;MA:0000124;;SCTID:181278006;;TAO:0001372;;ZFA:0001372 | |xref=EHDAA:9194;;FMA:10419;;http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png;;MA:0000124;;SCTID:181278006;;TAO:0001372;;ZFA:0001372 | ||
|is_a=UBERON: | |is_a=UBERON:0003928;;UBERON:0004119 | ||
|synonym="duct of pancreas" EXACT [OBOL:automatic];;"pancreas duct" EXACT [OBOL:automatic] | |synonym="duct of pancreas" EXACT [OBOL:automatic];;"ductus pancreaticus" RELATED LATIN [Wikipedia:Pancreatic_duct];;"pancreas duct" EXACT [OBOL:automatic] | ||
|comment=note that this class groups together accessory (dorsal) and main (ventral) pancreatic ducts. | |comment=note that this class groups together accessory (dorsal) and main (ventral) pancreatic ducts. AO notes: in EHDAA2, the dorsal and ventral ducts are classified as epithelial sacs - review after overhaul of duct/epithelia terms | ||
|alt_id= | |alt_id= | ||
|disjoint_from= | |disjoint_from= | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset=vertebrate_core | |subset=vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0003922 | |develops_from=UBERON:0003922 | ||
Latest revision as of 13:43, 27 June 2012
| Name: | pancreatic duct | ||
|---|---|---|---|
| Definition: | "A duct that is part of the pancreas and connected to the duodenum." [UBERON:cjm, Wikipedia:Pancreatic_duct] | ||
| Xrefs: |
| ||
| Synonyms: |
"duct of pancreas" EXACT [OBOL:automatic] "ductus pancreaticus" RELATED LATIN [Wikipedia:Pancreatic_duct] "pancreas duct" EXACT [OBOL:automatic] | ||
| Comments: | note that this class groups together accessory (dorsal) and main (ventral) pancreatic ducts. AO notes: in EHDAA2, the dorsal and ventral ducts are classified as epithelial sacs - review after overhaul of duct/epithelia terms | ||
| Subset: | vertebrate_core |
Gray1100.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003928(digestive system duct),UBERON:0004119(endoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0003922(pancreatic epithelial bud) |
| part_of: | UBERON:0001264(pancreas) |
Children
| is a: | FF:0103883 (pancreatic ductal adenocarcinoma cell line) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007329 (pancreatic duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
