UBERON:0002173: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0002048;;UBERON:0006524 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 13:31, 27 June 2012
| Name: | alveolar duct | ||
|---|---|---|---|
| Definition: | "Alveolar ducts are the tiny end ducts of the branching airways that fill the lungs. Each lung holds approximately 1.5 to 2 million of them. The tubules divide into two or three alveolar sacs at the distal end. They are formed from the confluence openings of several alveoli. Distal terminations of alveolar ducts are atria which then end in alveolar sacs. In human anatomy, respiratory bronchioles exists proximal to the alveolar ducts. The epithelial lining consists of smooth muscle knobs covered by nonciliated, simple cuboidal cells. The smooth muscle constricts under parasympathetic innervation and relax under sympathetic innervation. [WP,unvetted]." [Wikipedia:Alveolar_duct] | ||
| Xrefs: |
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| Alt_id: | UBERON:FMA_7341-MA_0000417 | ||
| Subset: | uberon_slim |
Gray975.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000058(duct),UBERON:0004119(endoderm-derived structure) |
|---|---|
| part_of: | UBERON:0002048(lung),UBERON:0006524(alveolar system) |
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002173 (alveolar duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_dd2e1923f0d8731e9eb1f990165788b2 | p1@SSX5 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr14:36536932..36536937, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_dd2e1923f0d8731e9eb1f990165788b2 | p13@CPXM1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:11118533..11118538,+#_dd2e1923f0d8731e9eb1f990165788b2 | p12@CLEC16A |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_dd2e1923f0d8731e9eb1f990165788b2 | p14@DNMBP |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_dd2e1923f0d8731e9eb1f990165788b2 | p1@ENST00000430271 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_dd2e1923f0d8731e9eb1f990165788b2 | p12@CPXM1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:2779140..2779150,-#_dd2e1923f0d8731e9eb1f990165788b2 | p9@CPXM1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_dd2e1923f0d8731e9eb1f990165788b2 | p13@DNMBP |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_dd2e1923f0d8731e9eb1f990165788b2 | p1@ENST00000418699, p1@ENST00000432330 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr14:36536932..36536937, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr17:63511856..63511858, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr17:13574618..13574636, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_dd2e1923f0d8731e9eb1f990165788b2 | p16@CPXM1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_dd2e1923f0d8731e9eb1f990165788b2 | p13@CPXM1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_dd2e1923f0d8731e9eb1f990165788b2 | p12@CLEC16A |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr3:87647430..87647437, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_dd2e1923f0d8731e9eb1f990165788b2 | p1@SSX5 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_dd2e1923f0d8731e9eb1f990165788b2 | p14@DNMBP |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_dd2e1923f0d8731e9eb1f990165788b2 | p1@ENST00000418699, p1@ENST00000432330 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_dd2e1923f0d8731e9eb1f990165788b2 | p1@ENST00000430271 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_dd2e1923f0d8731e9eb1f990165788b2 | p12@CPXM1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_dd2e1923f0d8731e9eb1f990165788b2 | p13@DNMBP |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_dd2e1923f0d8731e9eb1f990165788b2 | p9@CPXM1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:63511856..63511858,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr17:63511856..63511858, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr17:13574618..13574636, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_dd2e1923f0d8731e9eb1f990165788b2 | p16@CPXM1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_dd2e1923f0d8731e9eb1f990165788b2 | p@chr3:87647430..87647437, - |
| 3.96e-66 | FFCP PHASE2:Hg19::chr2:191696381..191696384,-#_cd6ceda5f2a0233544eaca55652f4658 | p@chr2:191696381..191696384, - |
| 3.96e-66 | FFCP PHASE1:Hg19::chr2:191696381..191696384,-#_cd6ceda5f2a0233544eaca55652f4658 | p@chr2:191696381..191696384, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_3a4086e290e5b3c50f2b7d875db16911 | p30@NELF |
| 2.74e-50 | FFCP PHASE2:Hg19::chr11:104005546..104005596,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr11:104005546..104005596, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_3a4086e290e5b3c50f2b7d875db16911 | p3@FMR1NB |
| 2.74e-50 | FFCP PHASE1:Hg19::chr4:169956294..169956301,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr4:169956294..169956301, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_3a4086e290e5b3c50f2b7d875db16911 | p30@PDP1 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr10:101691199..101691208,-#_3a4086e290e5b3c50f2b7d875db16911 | p11@DNMBP |
| 2.74e-50 | FFCP PHASE2:Hg19::chr10:101691101..101691115,-#_3a4086e290e5b3c50f2b7d875db16911 | p7@DNMBP |
| 2.74e-50 | FFCP PHASE2:Hg19::chr11:106266838..106266843,+#_3a4086e290e5b3c50f2b7d875db16911 | p@chr11:106266838..106266843, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr11:41809203..41809208,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr11:41809203..41809208, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_3a4086e290e5b3c50f2b7d875db16911 | p30@NELF |
| 2.74e-50 | FFCP PHASE2:Hg19::chr8:122157279..122157284,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr8:122157279..122157284, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr11:104005546..104005596,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr11:104005546..104005596, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_3a4086e290e5b3c50f2b7d875db16911 | p3@FMR1NB |
| 2.74e-50 | FFCP PHASE2:Hg19::chr4:169956294..169956301,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr4:169956294..169956301, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr9:103785643..103785646,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr9:103785643..103785646, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr10:101691199..101691208,-#_3a4086e290e5b3c50f2b7d875db16911 | p11@DNMBP |
| 2.74e-50 | FFCP PHASE1:Hg19::chr10:101691101..101691115,-#_3a4086e290e5b3c50f2b7d875db16911 | p7@DNMBP |
| 2.74e-50 | FFCP PHASE1:Hg19::chr11:106266838..106266843,+#_3a4086e290e5b3c50f2b7d875db16911 | p@chr11:106266838..106266843, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr11:41809203..41809208,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr11:41809203..41809208, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_3a4086e290e5b3c50f2b7d875db16911 | p30@PDP1 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr9:103785643..103785646,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr9:103785643..103785646, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr8:122157279..122157284,-#_3a4086e290e5b3c50f2b7d875db16911 | p@chr8:122157279..122157284, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr1:93054640..93054674,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr1:93054640..93054674, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399263..45399274, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45405332..45405343, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:46985426..46985427,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:46985426..46985427, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr1:119837700..119837705,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr1:119837700..119837705, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr17:63533845..63533851,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr17:63533845..63533851, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:140349915..140349924,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p34@NELF |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr3:139035972..139036016, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:141743015..141743025,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:141743015..141743025, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399294..45399301, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45405393..45405412, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:169691363..169691375, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr4:171012844..171012850,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p12@AADAT |
| 4.52e-50 | FFCP PHASE2:Hg19::chr15:55806847..55806854,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr15:55806847..55806854, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399533..45399540, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr20:2795718..2795731,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p5@C20orf141 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399245..45399258, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45405332..45405343, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:141743015..141743025,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:141743015..141743025, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr1:93054640..93054674,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr1:93054640..93054674, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:46985426..46985427,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:46985426..46985427, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr2:118846114..118846125,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p6@INSIG2 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:140349856..140349859,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p36@NELF |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:169691363..169691375,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:169691363..169691375, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr12:65386452..65386492,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr12:65386452..65386492, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr17:63533845..63533851,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr17:63533845..63533851, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr3:139035972..139036016, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399533..45399540, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399263..45399274, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45405393..45405412, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr1:119837700..119837705,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr1:119837700..119837705, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr4:171012844..171012850,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p12@AADAT |
| 4.52e-50 | FFCP PHASE1:Hg19::chr15:55806847..55806854,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr15:55806847..55806854, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399245..45399258, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:140349915..140349924,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p34@NELF |
| 4.52e-50 | FFCP PHASE2:Hg19::chr2:118846114..118846125,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p6@INSIG2 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:140349856..140349859,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p36@NELF |
| 4.52e-50 | FFCP PHASE1:Hg19::chr20:2795718..2795731,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p5@C20orf141 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr12:65386452..65386492,-#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr12:65386452..65386492, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_ceb8bbae41d3e2a24f5f39e4bb620f77 | p@chr6:45399294..45399301, + |
| 4.0e-45 | FFCP PHASE1:Hg19::chr2:75751179..75751194,+#_a957951012b1704597bfd4d7a90e5200 | p1@BC018659 |
| 4.0e-45 | FFCP PHASE2:Hg19::chr2:75751179..75751194,+#_a957951012b1704597bfd4d7a90e5200 | p1@BC018659 |
| 1.1e-40 | FFCP PHASE2:Hg19::chr14:29047235..29047244,+#_b267a4ea44991b21645002bc57d7c45f | p@chr14:29047235..29047244, + |
| 1.1e-40 | FFCP PHASE1:Hg19::chr14:29047235..29047244,+#_b267a4ea44991b21645002bc57d7c45f | p@chr14:29047235..29047244, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr11:47256459..47256470,+#_7ab190b1d2fc382ffda3f1b1e8727ce6 | p@chr11:47256459..47256470, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr8:144260966..144260967,-#_7ab190b1d2fc382ffda3f1b1e8727ce6 | p@chr8:144260966..144260967, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr1:87994589..87994604,-#_7ab190b1d2fc382ffda3f1b1e8727ce6 | p@chr1:87994589..87994604, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_7ab190b1d2fc382ffda3f1b1e8727ce6 | p@chr13:70823810..70823813, + |
