UBERON:0000092: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0000092
|name=post-embryonic stage
|namespace=
|def="stage succeeding embryo, including mature structure" [UBERON:cjm]
|xref=OGES:000010;;OGES:000014;...") |
No edit summary |
||
| Line 18: | Line 18: | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000104 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 13:25, 27 June 2012
| Name: | post-embryonic stage | ||
|---|---|---|---|
| Definition: | "stage succeeding embryo, including mature structure" [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: |
"postembryonic" RELATED [] "postembryonic stage" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000105(life cycle stage) |
|---|---|
| part_of: | UBERON:0000104(life cycle) |
Children
| is a: | UBERON:0000066 (fully formed stage) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10352-105E1 (medial frontal gyrus, newborn, donor10223)
- 10353-105E2 (medial temporal gyrus, newborn, donor10223)
- 10354-105E3 (caudate nucleus, newborn, donor10223)
- 10355-105E4 (occipital cortex, newborn, donor10223)
- 10356-105E5 (parietal lobe, newborn, donor10223)
- 10357-105E6 (cerebellum, newborn, donor10223)
- 10358-105E7 (substantia nigra, newborn, donor10223)
- 10359-105E8 (spinal cord, newborn, donor10223)
- 10360-105E9 (amygdala, newborn, donor10223)
- 10361-105F1 (medulla oblongata, newborn, donor10223)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000092 (post-embryonic stage), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
