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{{CL
{{CL
|id=CL:0000202
|id=CL:0000202
|name=cochlear hair cell
|name=auditory hair cell;;cochlear hair cell
|namespace=efo
|namespace=cell;;efo
|def="A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [MESH:A.08.663.650.250]
|def="A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [MESH:A.08.663.650.250]
|xref=FMA:62364
|xref=FMA:62364
|is_a=CL:0002374;;CL:0002491;;EFO:0000324
|is_a=CL:0002374;;CL:0002491
|synonym="auditory receptor cell" EXACT [];;"cochlear hair cell" EXACT []
|synonym="auditory receptor cell" EXACT [];;"cochlear hair cell" EXACT [];;"inner ear hair cell" EXACT [GO:0060119];;"inner ear receptor cell" EXACT [GO:0060119]
|comment=In mammals these cells are located in the organ of Corti.
|comment=In mammals these cells are located in the organ of Corti.
|alt_id=CL:0000201
|alt_id=CL:0000201
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:24, 26 June 2012

Name:auditory hair cell;;cochlear hair cell
Namespace:cell;;efo
Definition:"A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [MESH:A.08.663.650.250]
Xrefs:
links:
FMA:62364
Synonyms: "auditory receptor cell" EXACT []
"cochlear hair cell" EXACT []
"inner ear hair cell" EXACT [GO:0060119]
"inner ear receptor cell" EXACT [GO:0060119]
Comments:In mammals these cells are located in the organ of Corti.
Alt_id: CL:0000201


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002374(ear hair cell),CL:0002491(auditory epithelial cell)



Children


is a:CL:0000589 (cochlear inner hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000202 (auditory hair cell;;cochlear hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_11fa8e49030c043265c7b5924e6ceeaep@chr3:127520184..127520191, -
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_11fa8e49030c043265c7b5924e6ceeaep24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_11fa8e49030c043265c7b5924e6ceeaep@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_11fa8e49030c043265c7b5924e6ceeaep1@Zpld1
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_11fa8e49030c043265c7b5924e6ceeaep@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_11fa8e49030c043265c7b5924e6ceeaep@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_11fa8e49030c043265c7b5924e6ceeaep@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_11fa8e49030c043265c7b5924e6ceeaep@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_11fa8e49030c043265c7b5924e6ceeaep@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_11fa8e49030c043265c7b5924e6ceeaep@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_11fa8e49030c043265c7b5924e6ceeaep@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_11fa8e49030c043265c7b5924e6ceeaep@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_11fa8e49030c043265c7b5924e6ceeaep@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_11fa8e49030c043265c7b5924e6ceeaep7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_11fa8e49030c043265c7b5924e6ceeaep@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_11fa8e49030c043265c7b5924e6ceeaep@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_11fa8e49030c043265c7b5924e6ceeaep@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_11fa8e49030c043265c7b5924e6ceeaep@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_11fa8e49030c043265c7b5924e6ceeaep@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_11fa8e49030c043265c7b5924e6ceeaep@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_11fa8e49030c043265c7b5924e6ceeaep@chr15:97828021..97828028, -
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_11fa8e49030c043265c7b5924e6ceeaep@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_11fa8e49030c043265c7b5924e6ceeaep7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_11fa8e49030c043265c7b5924e6ceeaep@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_11fa8e49030c043265c7b5924e6ceeaep@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_11fa8e49030c043265c7b5924e6ceeaep@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_11fa8e49030c043265c7b5924e6ceeaep@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_11fa8e49030c043265c7b5924e6ceeaep10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_11fa8e49030c043265c7b5924e6ceeaep@chr2:53464193..53464197, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_11fa8e49030c043265c7b5924e6ceeaep@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_11fa8e49030c043265c7b5924e6ceeaep@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_11fa8e49030c043265c7b5924e6ceeaep@chr18:66033513..66033517, -
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_11fa8e49030c043265c7b5924e6ceeaep@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_11fa8e49030c043265c7b5924e6ceeaep@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_11fa8e49030c043265c7b5924e6ceeaep@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_11fa8e49030c043265c7b5924e6ceeaep@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_11fa8e49030c043265c7b5924e6ceeaep@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_11fa8e49030c043265c7b5924e6ceeaep10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_11fa8e49030c043265c7b5924e6ceeaep@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_11fa8e49030c043265c7b5924e6ceeaep@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_11fa8e49030c043265c7b5924e6ceeaep11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_11fa8e49030c043265c7b5924e6ceeaep1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_11fa8e49030c043265c7b5924e6ceeaep@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_11fa8e49030c043265c7b5924e6ceeaep@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_11fa8e49030c043265c7b5924e6ceeaep@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_11fa8e49030c043265c7b5924e6ceeaep@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_11fa8e49030c043265c7b5924e6ceeaep@chr2:180335744..180335746, +
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_11fa8e49030c043265c7b5924e6ceeaep@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_11fa8e49030c043265c7b5924e6ceeaep11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_11fa8e49030c043265c7b5924e6ceeaep@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_11fa8e49030c043265c7b5924e6ceeaep@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_11fa8e49030c043265c7b5924e6ceeaep8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_11fa8e49030c043265c7b5924e6ceeaep@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_11fa8e49030c043265c7b5924e6ceeaep@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_11fa8e49030c043265c7b5924e6ceeaep24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_11fa8e49030c043265c7b5924e6ceeaep3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_11fa8e49030c043265c7b5924e6ceeaep@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_11fa8e49030c043265c7b5924e6ceeaep3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_11fa8e49030c043265c7b5924e6ceeaep8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_11fa8e49030c043265c7b5924e6ceeaep@chr15:91379135..91379143, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_11fa8e49030c043265c7b5924e6ceeaep@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_11fa8e49030c043265c7b5924e6ceeaep@chr11:94371110..94371111, -
2.74e-44FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_4094126718b698ad3dd1a47764dbdd97p@chr3:154459184..154459195, +
2.74e-44FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_4094126718b698ad3dd1a47764dbdd97p@chr13:37195838..37195870, -
2.74e-44FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_4094126718b698ad3dd1a47764dbdd97p@chr6:113251614..113251623, +
2.74e-44FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_4094126718b698ad3dd1a47764dbdd97p@chr4:63079735..63079745, -
2.74e-44FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_4094126718b698ad3dd1a47764dbdd97p@chr1:94627290..94627299, -
2.74e-44FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_4094126718b698ad3dd1a47764dbdd97p@chr1:182528388..182528403, +
2.74e-44FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_4094126718b698ad3dd1a47764dbdd97p@chr2:152453066..152453075, -
2.74e-44FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_4094126718b698ad3dd1a47764dbdd97p@chr12:109905399..109905416, +
2.74e-44FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_4094126718b698ad3dd1a47764dbdd97p2@Gpr152
2.74e-44FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_4094126718b698ad3dd1a47764dbdd97p@chr1:16651649..16651655, +
2.74e-44FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_4094126718b698ad3dd1a47764dbdd97p@chr6:113251570..113251578, +
2.74e-44FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_4094126718b698ad3dd1a47764dbdd97p@chr5:3909290..3909299, +
2.74e-44FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_4094126718b698ad3dd1a47764dbdd97p4@Gipc3
2.74e-44FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_4094126718b698ad3dd1a47764dbdd97p@chr1:78523144..78523177, +
2.74e-44FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_4094126718b698ad3dd1a47764dbdd97p@chr3:58626291..58626298, -
2.74e-44FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_4094126718b698ad3dd1a47764dbdd97p@chr18:66033526..66033539, -
2.74e-44FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_4094126718b698ad3dd1a47764dbdd97p@chrX:154140800..154140810, +
2.74e-44FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_4094126718b698ad3dd1a47764dbdd97p@chr17:13983095..13983100, +
2.74e-44FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_4094126718b698ad3dd1a47764dbdd97p@chr7:133957514..133957529, +
2.74e-44FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_4094126718b698ad3dd1a47764dbdd97p@chr4:154208086..154208123, +
2.74e-44FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_4094126718b698ad3dd1a47764dbdd97p@chr1:194818647..194818660, -
2.74e-44FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_4094126718b698ad3dd1a47764dbdd97p4@BC030867
2.74e-44FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_4094126718b698ad3dd1a47764dbdd97p3@Ptprq
2.74e-44FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_4094126718b698ad3dd1a47764dbdd97p@chr15:85334335..85334353, +
2.74e-44FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_4094126718b698ad3dd1a47764dbdd97p@chr5:147854240..147854249, -
2.74e-44FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_4094126718b698ad3dd1a47764dbdd97p@chr1:172843885..172843890, -
2.74e-44FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_4094126718b698ad3dd1a47764dbdd97p@chr11:4689776..4689785, -
2.74e-44FFCP PHASE1:Mm9::chr8:79834836..79834846,-#_4094126718b698ad3dd1a47764dbdd97p@chr8:79834836..79834846, -
2.74e-44FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_4094126718b698ad3dd1a47764dbdd97p@chr7:133957514..133957529, +
2.74e-44FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_4094126718b698ad3dd1a47764dbdd97p@chr6:86745686..86745727, -
2.74e-44FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_4094126718b698ad3dd1a47764dbdd97p1@Dytn
2.74e-44FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_4094126718b698ad3dd1a47764dbdd97p@chr12:13508046..13508055, +
2.74e-44FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_4094126718b698ad3dd1a47764dbdd97p@chr6:86746562..86746579, -
2.74e-44FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_4094126718b698ad3dd1a47764dbdd97p@chr15:97806034..97806061, +
2.74e-44FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_4094126718b698ad3dd1a47764dbdd97p@chr4:133802857..133802884, +
2.74e-44FFCP PHASE1:Mm9::chr13:31877112..31877122,+#_4094126718b698ad3dd1a47764dbdd97p@chr13:31877112..31877122, +
2.74e-44FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_4094126718b698ad3dd1a47764dbdd97p@chr14:31283085..31283097, -
2.74e-44FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_4094126718b698ad3dd1a47764dbdd97p2@Strc

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