UBERON:0009751: Difference between revisions
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|def="the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing cardiac structures" [MP:0011264] | |def="the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing cardiac structures" [MP:0011264] | ||
|xref=EHDAA2:0004162 | |xref=EHDAA2:0004162 | ||
|is_a=UBERON:0000477;;UBERON:0003104 | |is_a=UBERON:0000477;;UBERON:0003104;;UBERON:0004120 | ||
|synonym= | |synonym= | ||
|comment=Editor note: decide whether to merge with cardiac mesoderm. Check start/end stages | |comment=Editor note: decide whether to merge with cardiac mesoderm. Check start/end stages | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:08, 26 June 2012
| Name: | cardiac mesenchyme | ||
|---|---|---|---|
| Definition: | "the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing cardiac structures" [MP:0011264] | ||
| Xrefs: |
| ||
| Comments: | Editor note: decide whether to merge with cardiac mesoderm. Check start/end stages |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000477(anatomical cluster),UBERON:0003104(mesenchyme),UBERON:0004120(mesoderm-derived structure) |
|---|
Children
| is a: | UBERON:0002062 (endocardial cushion) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009751 (cardiac mesenchyme), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.41e-147 | FFCP PHASE2:Hg19::chr7:25815812..25815822,-#_005e3494c56fbd74fdec5d77e95a20e8 | p@chr7:25815812..25815822, - |
| 5.41e-147 | FFCP PHASE1:Hg19::chr7:25815812..25815822,-#_005e3494c56fbd74fdec5d77e95a20e8 | p@chr7:25815812..25815822, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr12:3373147..3373149,-#_d32306bc87e3793e8d0ab035916d0986 | p@chr12:3373147..3373149, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr12:3373147..3373149,-#_d32306bc87e3793e8d0ab035916d0986 | p@chr12:3373147..3373149, - |
| 7.78e-118 | FFCP PHASE1:Hg19::chr1:20355975..20355980,-#_e3f540219bc95133950165fe0bce34df | p@chr1:20355975..20355980, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr1:20355975..20355980,-#_e3f540219bc95133950165fe0bce34df | p@chr1:20355975..20355980, - |
| 5.69e-99 | FFCP PHASE1:Hg19::chr1:237331032..237331036,+#_bd6a0b7745366a2db00488b5c1cacd7b | p@chr1:237331032..237331036, + |
| 5.69e-99 | FFCP PHASE2:Hg19::chr1:237331032..237331036,+#_bd6a0b7745366a2db00488b5c1cacd7b | p@chr1:237331032..237331036, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr6:6739548..6739577,-#_a5ea95df91651720bb80d697e6628440 | p@chr6:6739548..6739577, - |
| 1.52e-87 | FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_a5ea95df91651720bb80d697e6628440 | p9@NPPA |
| 1.52e-87 | FFCP PHASE1:Hg19::chr6:6739548..6739577,-#_a5ea95df91651720bb80d697e6628440 | p@chr6:6739548..6739577, - |
| 1.52e-87 | FFCP PHASE2:Hg19::chr2:18116344..18116353,+#_a5ea95df91651720bb80d697e6628440 | p@chr2:18116344..18116353, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_a5ea95df91651720bb80d697e6628440 | p9@NPPA |
| 1.52e-87 | FFCP PHASE1:Hg19::chr2:18116344..18116353,+#_a5ea95df91651720bb80d697e6628440 | p@chr2:18116344..18116353, + |
| 7.21e-85 | FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_67d18c7fbd601550d2f8147214968199 | p@chrX:112324334..112324339, - |
| 7.21e-85 | FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_67d18c7fbd601550d2f8147214968199 | p@chrX:112324334..112324339, - |
| 1.71e-84 | FFCP PHASE2:Hg19::chr2:220491902..220491915,+#_67bcac21a6fddc5d2409b47b1dcb3c85 | p11@SLC4A3 |
| 1.71e-84 | FFCP PHASE1:Hg19::chr2:220491902..220491915,+#_67bcac21a6fddc5d2409b47b1dcb3c85 | p11@SLC4A3 |
| 2.27e-84 | FFCP PHASE2:Hg19::chr2:179533457..179533461,-#_bbab6ca6e7ecdb882015743ecbccff9d | p@chr2:179533457..179533461, - |
| 2.27e-84 | FFCP PHASE1:Hg19::chr2:179533457..179533461,-#_bbab6ca6e7ecdb882015743ecbccff9d | p@chr2:179533457..179533461, - |
| 3.03e-84 | FFCP PHASE1:Hg19::chr2:179398102..179398109,-#_e51cf2c094c83ef3df262ede9a2b9f22 | p@chr2:179398102..179398109, - |
| 3.03e-84 | FFCP PHASE2:Hg19::chr2:179398102..179398109,-#_e51cf2c094c83ef3df262ede9a2b9f22 | p@chr2:179398102..179398109, - |
| 7.81e-75 | FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_b5882a5b856c990bef803181b7111e9b | p@chr5:123739302..123739319, - |
| 7.81e-75 | FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_b5882a5b856c990bef803181b7111e9b | p@chr5:123739302..123739319, - |
| 1.01e-74 | FFCP PHASE1:Hg19::chr18:64271475..64271484,-#_46f791049d98a40977a0e01ab58d0740 | p6@CDH19 |
| 1.01e-74 | FFCP PHASE2:Hg19::chr18:64271475..64271484,-#_46f791049d98a40977a0e01ab58d0740 | p6@CDH19 |
| 1.29e-74 | FFCP PHASE2:Hg19::chr7:35286774..35286778,-#_7b6ef860fe74455804abe90520e16160 | p@chr7:35286774..35286778, - |
| 1.29e-74 | FFCP PHASE1:Hg19::chr7:35286774..35286778,-#_7b6ef860fe74455804abe90520e16160 | p@chr7:35286774..35286778, - |
| 1.66e-74 | FFCP PHASE2:Hg19::chr6:129355052..129355056,+#_249d4446eccd19a72e62a9aa5b6fb20d | p@chr6:129355052..129355056, + |
| 1.66e-74 | FFCP PHASE1:Hg19::chr6:129355052..129355056,+#_249d4446eccd19a72e62a9aa5b6fb20d | p@chr6:129355052..129355056, + |
| 2.75e-74 | FFCP PHASE1:Hg19::chr3:16940540..16940554,+#_5d6c3e81f2d9a7ca68e3ca7ecfe9a202 | p@chr3:16940540..16940554, + |
| 2.75e-74 | FFCP PHASE2:Hg19::chr3:16940540..16940554,+#_5d6c3e81f2d9a7ca68e3ca7ecfe9a202 | p@chr3:16940540..16940554, + |
| 3.54e-74 | FFCP PHASE2:Hg19::chr20:33565465..33565475,+#_32d337e07db1924d67ee8da67bb69a51 | p9@MYH7B |
| 3.54e-74 | FFCP PHASE1:Hg19::chr3:131523446..131523459,-#_32d337e07db1924d67ee8da67bb69a51 | p@chr3:131523446..131523459, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr1:201328779..201328797,-#_32d337e07db1924d67ee8da67bb69a51 | p@chr1:201328779..201328797, - |
| 3.54e-74 | FFCP PHASE1:Hg19::chr20:33565465..33565475,+#_32d337e07db1924d67ee8da67bb69a51 | p9@MYH7B |
| 3.54e-74 | FFCP PHASE1:Hg19::chr19:55661803..55661807,-#_32d337e07db1924d67ee8da67bb69a51 | p@chr19:55661803..55661807, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr19:55661803..55661807,-#_32d337e07db1924d67ee8da67bb69a51 | p@chr19:55661803..55661807, - |
| 3.54e-74 | FFCP PHASE1:Hg19::chr1:201328779..201328797,-#_32d337e07db1924d67ee8da67bb69a51 | p@chr1:201328779..201328797, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr3:131523446..131523459,-#_32d337e07db1924d67ee8da67bb69a51 | p@chr3:131523446..131523459, - |
| 5.84e-74 | FFCP PHASE2:Hg19::chr6:36812121..36812130,-#_f3e170e45c179e9c56b21a02c2afbf14 | p@chr6:36812121..36812130, - |
| 5.84e-74 | FFCP PHASE1:Hg19::chr6:36812121..36812130,-#_f3e170e45c179e9c56b21a02c2afbf14 | p@chr6:36812121..36812130, - |
| 7.51e-74 | FFCP PHASE2:Hg19::chr14:105939326..105939337,+#_dc34da97a0385a65c731f8bed13d6b09 | p16@CRIP2 |
| 7.51e-74 | FFCP PHASE1:Hg19::chr14:105939326..105939337,+#_dc34da97a0385a65c731f8bed13d6b09 | p16@CRIP2 |
| 9.64e-74 | FFCP PHASE1:Hg19::chr1:206838422..206838456,+#_75fdfccdbe720484469c239d8df45314 | p@chr1:206838422..206838456, + |
| 9.64e-74 | FFCP PHASE2:Hg19::chr1:206838422..206838456,+#_75fdfccdbe720484469c239d8df45314 | p@chr1:206838422..206838456, + |
| 1.24e-73 | FFCP PHASE2:Hg19::chr1:231983543..231983554,-#_c81443c9ba928586d238e2743ee50477 | p@chr1:231983543..231983554, - |
| 1.24e-73 | FFCP PHASE1:Hg19::chr1:231983543..231983554,-#_c81443c9ba928586d238e2743ee50477 | p@chr1:231983543..231983554, - |
| 1.54e-66 | FFCP PHASE1:Hg19::chr1:201328328..201328343,-#_21f51e4eb706a630744ff4e42c1af668 | p@chr1:201328328..201328343, - |
| 1.54e-66 | FFCP PHASE2:Hg19::chr1:201328328..201328343,-#_21f51e4eb706a630744ff4e42c1af668 | p@chr1:201328328..201328343, - |
| 1.71e-66 | FFCP PHASE1:Hg19::chr1:237214095..237214115,+#_4577feb8d8cd59d40a9a70cd2c82653a | p@chr1:237214095..237214115, + |
| 1.71e-66 | FFCP PHASE2:Hg19::chr1:237214095..237214115,+#_4577feb8d8cd59d40a9a70cd2c82653a | p@chr1:237214095..237214115, + |
| 1.71e-66 | FFCP PHASE1:Hg19::chr11:47367243..47367257,-#_4577feb8d8cd59d40a9a70cd2c82653a | p@chr11:47367243..47367257, - |
| 1.71e-66 | FFCP PHASE2:Hg19::chr11:47367243..47367257,-#_4577feb8d8cd59d40a9a70cd2c82653a | p@chr11:47367243..47367257, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_ca7fa453227222ca81c7d3ad4c603461 | p@chr15:86272097..86272099, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_ca7fa453227222ca81c7d3ad4c603461 | p@chr10:92678409..92678410, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_ca7fa453227222ca81c7d3ad4c603461 | p@chr5:99390735..99390743, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_ca7fa453227222ca81c7d3ad4c603461 | p@chr5:99390735..99390743, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_ca7fa453227222ca81c7d3ad4c603461 | p@chr15:86272097..86272099, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_ca7fa453227222ca81c7d3ad4c603461 | p@chr10:92678409..92678410, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr1:237996521..237996532,+#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr1:237996521..237996532, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr12:4735761..4735787, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr12:114886577..114886589, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr2:159976509..159976519,+#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr2:159976509..159976519, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr2:159976509..159976519,+#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr2:159976509..159976519, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr12:4735761..4735787, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr12:114886577..114886589, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr1:237996521..237996532,+#_820606fb1cd0307300ff90d9fee9ecc1 | p@chr1:237996521..237996532, + |
| 2.41e-66 | FFCP PHASE2:Hg19::chr2:40480968..40480972,-#_d0ede6bccfdf6197b691cddf8db7f6e9 | p@chr2:40480968..40480972, - |
| 2.41e-66 | FFCP PHASE1:Hg19::chr1:237207955..237207959,+#_d0ede6bccfdf6197b691cddf8db7f6e9 | p@chr1:237207955..237207959, + |
| 2.41e-66 | FFCP PHASE1:Hg19::chr2:40480968..40480972,-#_d0ede6bccfdf6197b691cddf8db7f6e9 | p@chr2:40480968..40480972, - |
| 2.41e-66 | FFCP PHASE2:Hg19::chr1:237207955..237207959,+#_d0ede6bccfdf6197b691cddf8db7f6e9 | p@chr1:237207955..237207959, + |
| 3.01e-66 | FFCP PHASE1:Hg19::chr4:62999501..62999517,+#_c13930c80f41a0b6d2af135de456404b | p@chr4:62999501..62999517, + |
| 3.01e-66 | FFCP PHASE2:Hg19::chr4:62999501..62999517,+#_c13930c80f41a0b6d2af135de456404b | p@chr4:62999501..62999517, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_a76d139f0b207eb1cf08665199019453 | p2@MYL7 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr9:38650254..38650266,+#_a76d139f0b207eb1cf08665199019453 | p@chr9:38650254..38650266, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr5:65736120..65736128,-#_a76d139f0b207eb1cf08665199019453 | p@chr5:65736120..65736128, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_a76d139f0b207eb1cf08665199019453 | p2@MYL7 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_a76d139f0b207eb1cf08665199019453 | p@chr1:11905830..11905839, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr5:65736120..65736128,-#_a76d139f0b207eb1cf08665199019453 | p@chr5:65736120..65736128, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:35253487..35253489,-#_a76d139f0b207eb1cf08665199019453 | p@chr7:35253487..35253489, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_a76d139f0b207eb1cf08665199019453 | p@chr1:11905830..11905839, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr9:38650254..38650266,+#_a76d139f0b207eb1cf08665199019453 | p@chr9:38650254..38650266, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_a76d139f0b207eb1cf08665199019453 | p@chr7:44178491..44178498, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:35253487..35253489,-#_a76d139f0b207eb1cf08665199019453 | p@chr7:35253487..35253489, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_a76d139f0b207eb1cf08665199019453 | p@chr7:44178491..44178498, - |
| 4.68e-66 | FFCP PHASE1:Hg19::chr10:112524543..112524547,+#_ce2b50861f1ea07b210f0d91a181f1d5 | p@chr10:112524543..112524547, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr10:112524543..112524547,+#_ce2b50861f1ea07b210f0d91a181f1d5 | p@chr10:112524543..112524547, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_ce2b50861f1ea07b210f0d91a181f1d5 | p3@MYL7 |
| 4.68e-66 | FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_ce2b50861f1ea07b210f0d91a181f1d5 | p3@MYL7 |
| 5.88e-66 | FFCP PHASE2:Hg19::chr6:36812225..36812238,-#_f9446d473ff1632789d18389b6dde9d4 | p@chr6:36812225..36812238, - |
| 5.88e-66 | FFCP PHASE1:Hg19::chr6:36812225..36812238,-#_f9446d473ff1632789d18389b6dde9d4 | p@chr6:36812225..36812238, - |
| 6.53e-66 | FFCP PHASE1:Hg19::chr2:168104544..168104551,+#_3f26c75fe5c7c7c8d15ba352b480037c | p52@XIRP2 |
| 6.53e-66 | FFCP PHASE2:Hg19::chr4:62999459..62999462,+#_3f26c75fe5c7c7c8d15ba352b480037c | p@chr4:62999459..62999462, + |
| 6.53e-66 | FFCP PHASE1:Hg19::chr4:62999459..62999462,+#_3f26c75fe5c7c7c8d15ba352b480037c | p@chr4:62999459..62999462, + |
| 6.53e-66 | FFCP PHASE2:Hg19::chr2:168104544..168104551,+#_3f26c75fe5c7c7c8d15ba352b480037c | p52@XIRP2 |
| 1.15e-65 | FFCP PHASE2:Hg19::chr10:127569398..127569410,-#_3e204dc3ee11abcddd44f08372aff09c | p5@DHX32 |
| 1.15e-65 | FFCP PHASE2:Hg19::chrX:121555838..121555874,+#_3e204dc3ee11abcddd44f08372aff09c | p@chrX:121555838..121555874, + |
| 1.15e-65 | FFCP PHASE1:Hg19::chrX:121555838..121555874,+#_3e204dc3ee11abcddd44f08372aff09c | p@chrX:121555838..121555874, + |
| 1.15e-65 | FFCP PHASE1:Hg19::chr7:123302841..123302854,+#_3e204dc3ee11abcddd44f08372aff09c | p@chr7:123302841..123302854, + |
