UBERON:0000470: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0000470
|name=cell part
|namespace=
|def="Anatomical structure that is a direct part of the cell." [CARO:MAH]
|xref=AAO:0010271;;BILA:0000014;;CARO:00...") |
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Latest revision as of 16:57, 26 June 2012
| Name: | cell part | ||
|---|---|---|---|
| Definition: | "Anatomical structure that is a direct part of the cell." [CARO:MAH] | ||
| Xrefs: |
| ||
| Synonyms: | "cell component" RELATED [CARO:0000014] | ||
| Comments: | todo - move metadata to GO and obsolete this class. Note the inconsistency between the usage of the label 'cell component' in GO and CARO | ||
| Alt_id: | UBERON:CARO_0000014-FBbt_00007012-FMA_86454 | ||
| Subset: | upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000061(anatomical structure) |
|---|
Children
| is a: | UBERON:0005889 (zygote cortex) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1392-42F2 (cortex, neonate N30)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000470 (cell part), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
