UBERON:0000004: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0000004
|name=olfactory apparatus
|namespace=
|def="a protuberance in vertebrates that houses the nostrils, or nares, which admit and expel air for res...") |
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|def="a protuberance in vertebrates that houses the nostrils, or nares, which admit and expel air for respiration in conjunction with the mouth. Behind the nose are the olfactory mucosa and the sinuses. Behind the nasal cavity, air next passes through the pharynx, shared with the digestive system, and then into the rest of the respiratory system. In humans, the nose is located centrally on the face; on most other mammals, it is on the upper tip of the snout[WP]. GO: The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." [Wikipedia:Nose] | |def="a protuberance in vertebrates that houses the nostrils, or nares, which admit and expel air for respiration in conjunction with the mouth. Behind the nose are the olfactory mucosa and the sinuses. Behind the nasal cavity, air next passes through the pharynx, shared with the digestive system, and then into the rest of the respiratory system. In humans, the nose is located centrally on the face; on most other mammals, it is on the upper tip of the snout[WP]. GO: The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." [Wikipedia:Nose] | ||
|xref=BTO:0000840;;EFO:0000828;; | |xref=BTO:0000840;;EFO:0000828;;EHDAA2:0001274;;EHDAA:1502;;EMAPA:16542;;EV:0100037;;EV:0100370;;FMA:46472;;GAID:77;;galen:Nose;;http://upload.wikimedia.org/wikipedia/commons/d/d0/Canine-nose.jpg;;MA:0000281;;MAT:0000139;;MESH:A.01.456.505.733;;MIAA:0000139;;ncithesaurus:Nose;;OpenCyc:Mx4rvViCbJwpEbGdrcN5Y29ycA;;SCTID:181195007;;TAO:0000047;;ZFA:0000047 | ||
|is_a=UBERON:0002268 | |is_a=UBERON:0002268;;UBERON:0004121 | ||
|synonym="nasal sac" EXACT SENSU [ZFA:0000047];;"nose" EXACT [];;"peripheral olfactory organ" EXACT [];;"proboscis" RELATED [] | |synonym="nasal sac" EXACT SENSU [ZFA:0000047];;"Nasus" RELATED LATIN [Wikipedia:Nose];;"nose" EXACT [];;"peripheral olfactory organ" EXACT [];;"proboscis" RELATED [] | ||
|comment=TODO - distinguish generic olfactory apparatus from nose; we have olfactory organ for the generic organ - add new class 'olfactory structure'? | |comment=TODO - distinguish generic olfactory apparatus from nose; we have olfactory organ for the generic organ - add new class 'olfactory structure'? | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset=major_organ;;uberon_slim;;vertebrate_core | |subset=major_organ;;uberon_slim;;vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 16:55, 26 June 2012
| Name: | olfactory apparatus | ||
|---|---|---|---|
| Definition: | "a protuberance in vertebrates that houses the nostrils, or nares, which admit and expel air for respiration in conjunction with the mouth. Behind the nose are the olfactory mucosa and the sinuses. Behind the nasal cavity, air next passes through the pharynx, shared with the digestive system, and then into the rest of the respiratory system. In humans, the nose is located centrally on the face; on most other mammals, it is on the upper tip of the snout[WP]. GO: The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." [Wikipedia:Nose] | ||
| Xrefs: |
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| Synonyms: |
"nasal sac" EXACT SENSU [ZFA:0000047] "Nasus" RELATED LATIN [Wikipedia:Nose] "nose" EXACT [] "peripheral olfactory organ" EXACT [] "proboscis" RELATED [] | ||
| Comments: | TODO - distinguish generic olfactory apparatus from nose; we have olfactory organ for the generic organ - add new class 'olfactory structure'? | ||
| Subset: |
major_organ uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002268(olfactory organ),UBERON:0004121(ectoderm-derived structure) |
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Children
| part of: | UBERON:0001707 (nasal cavity) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000004 (olfactory apparatus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
