CL:0002592: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002592
|name=smooth muscle cell of the coronary artery
|namespace=cell
|def="A smooth muscle cell of the coronary artery." [GOC:tfm]
|xref=
|is_a=CL:0000359...") |
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Revision as of 17:41, 15 June 2012
| Name: | smooth muscle cell of the coronary artery |
|---|---|
| Namespace: | cell |
| Definition: | "A smooth muscle cell of the coronary artery." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:01:34Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000359(vascular associated smooth muscle cell) |
|---|---|
| part_of: | UBERON:0001621(coronary artery) |
Children
| derives from: | FF:0000172 (human smooth muscle cell of coronary artery sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11286-116I8 (Smooth Muscle Cells - Coronary Artery, donor1)
- 11363-117I4 (Smooth Muscle Cells - Coronary Artery, donor2)
- 11435-118H4 (Smooth Muscle Cells - Coronary Artery, donor3)
Mouse (Mus musculus)
- 11286-116I8 (Smooth Muscle Cells - Coronary Artery, donor1)
- 11363-117I4 (Smooth Muscle Cells - Coronary Artery, donor2)
- 11435-118H4 (Smooth Muscle Cells - Coronary Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002592 (smooth muscle cell of the coronary artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:96701429..96701463,-#_ea35a9ee4da9977adafe94bfdb055c82 | p@chr8:96701429..96701463, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:228743006..228743014,+#_ea35a9ee4da9977adafe94bfdb055c82 | p@chr2:228743006..228743014, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr8:96701429..96701463,-#_ea35a9ee4da9977adafe94bfdb055c82 | p@chr8:96701429..96701463, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:228743006..228743014,+#_ea35a9ee4da9977adafe94bfdb055c82 | p@chr2:228743006..228743014, + |
| 3.85e-34 | FFCP PHASE1:Hg19::chr1:94752932..94752936,+#_00d4662a4b9e8abeb0480505bad0faed | p@chr1:94752932..94752936, + |
| 3.85e-34 | FFCP PHASE2:Hg19::chr1:94752932..94752936,+#_00d4662a4b9e8abeb0480505bad0faed | p@chr1:94752932..94752936, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr9:119160366..119160371,+#_6e3fa8c222489c02fc95460f3a68aa41 | p91@PAPPA |
| 4.27e-34 | FFCP PHASE2:Hg19::chr21:35014977..35014986,+#_6e3fa8c222489c02fc95460f3a68aa41 | p16@ITSN1 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr9:119160366..119160371,+#_6e3fa8c222489c02fc95460f3a68aa41 | p91@PAPPA |
| 4.27e-34 | FFCP PHASE1:Hg19::chr21:35014977..35014986,+#_6e3fa8c222489c02fc95460f3a68aa41 | p16@ITSN1 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:78475671..78475674,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr1:78475671..78475674, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr3:114343262..114343275,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr3:114343262..114343275, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:168165589..168165617,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr1:168165589..168165617, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:38754506..38754523,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr6:38754506..38754523, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr11:86649555..86649566,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr11:86649555..86649566, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr9:118413157..118413164,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr9:118413157..118413164, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:16905879..16905882,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr6:16905879..16905882, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr4:69048358..69048369,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr4:69048358..69048369, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr4:104020020..104020035,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr4:104020020..104020035, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr2:216638374..216638390,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr2:216638374..216638390, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr20:25521435..25521445,-#_b78d12aef716def70c3c2b7fa27773bb | p8@NINL |
| 5.96e-34 | FFCP PHASE1:Hg19::chr8:107871438..107871439,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr8:107871438..107871439, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr2:220325633..220325639,+#_b78d12aef716def70c3c2b7fa27773bb | p34@SPEG |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:38754506..38754523,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr6:38754506..38754523, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr11:86649555..86649566,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr11:86649555..86649566, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:78475671..78475674,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr1:78475671..78475674, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr9:118413157..118413164,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr9:118413157..118413164, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:16905879..16905882,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr6:16905879..16905882, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr4:69048358..69048369,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr4:69048358..69048369, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr8:107871438..107871439,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr8:107871438..107871439, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:114343262..114343275,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr3:114343262..114343275, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:168165589..168165617,+#_b78d12aef716def70c3c2b7fa27773bb | p@chr1:168165589..168165617, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:216638374..216638390,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr2:216638374..216638390, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr20:25521435..25521445,-#_b78d12aef716def70c3c2b7fa27773bb | p8@NINL |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:220325633..220325639,+#_b78d12aef716def70c3c2b7fa27773bb | p34@SPEG |
| 5.96e-34 | FFCP PHASE1:Hg19::chr4:104020020..104020035,-#_b78d12aef716def70c3c2b7fa27773bb | p@chr4:104020020..104020035, - |
| 1.08e-33 | FFCP PHASE1:Hg19::chr11:102665915..102665927,+#_8926e935c4248e5dcdcddfe260611520 | p@chr11:102665915..102665927, + |
| 1.08e-33 | FFCP PHASE2:Hg19::chr11:102665915..102665927,+#_8926e935c4248e5dcdcddfe260611520 | p@chr11:102665915..102665927, + |
| 1.5e-33 | FFCP PHASE2:Hg19::chr11:116728814..116728821,-#_9fcd1d1438de6097ee65415e0abd871e | p@chr11:116728814..116728821, - |
| 1.5e-33 | FFCP PHASE1:Hg19::chr11:116728814..116728821,-#_9fcd1d1438de6097ee65415e0abd871e | p@chr11:116728814..116728821, - |
| 4.17e-30 | FFCP PHASE1:Hg19::chr7:5569572..5569582,-#_9b562f817e06f37bbc5251380b63eb15 | p40@ACTB |
| 4.17e-30 | FFCP PHASE2:Hg19::chr7:5569572..5569582,-#_9b562f817e06f37bbc5251380b63eb15 | p40@ACTB |
| 4.71e-29 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_e9dacc909d68dbc5c4a6d9126d086f19 | p@chr2:134548872..134548879, - |
| 4.71e-29 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_e9dacc909d68dbc5c4a6d9126d086f19 | p@chr2:134548872..134548879, - |
| 9.56e-27 | FFCP PHASE1:Hg19::chr11:102661008..102661029,-#_e0b07a670963ef7781ba37f517eb0b48 | p@chr11:102661008..102661029, - |
| 9.56e-27 | FFCP PHASE2:Hg19::chr11:102661008..102661029,-#_e0b07a670963ef7781ba37f517eb0b48 | p@chr11:102661008..102661029, - |
| 1.22e-26 | FFCP PHASE1:Hg19::chr11:102662218..102662229,-#_9ec9c8c67db34fb05f9e1864e91d7f08 | p@chr11:102662218..102662229, - |
| 1.22e-26 | FFCP PHASE2:Hg19::chr11:102662218..102662229,-#_9ec9c8c67db34fb05f9e1864e91d7f08 | p@chr11:102662218..102662229, - |
| 1.46e-26 | FFCP PHASE1:Hg19::chr17:67875049..67875058,+#_b6bd6f90a17cc1f9a63ab7d96aa22d54 | p@chr17:67875049..67875058, + |
| 1.46e-26 | FFCP PHASE2:Hg19::chr17:67875049..67875058,+#_b6bd6f90a17cc1f9a63ab7d96aa22d54 | p@chr17:67875049..67875058, + |
| 2.34e-25 | FFCP PHASE1:Hg19::chr11:102668148..102668159,+#_151e32aa8a3fa3750f933b7c51d83540 | p@chr11:102668148..102668159, + |
| 2.34e-25 | FFCP PHASE2:Hg19::chr11:102668148..102668159,+#_151e32aa8a3fa3750f933b7c51d83540 | p@chr11:102668148..102668159, + |
| 3.38e-25 | FFCP PHASE1:Hg19::chr9:101727602..101727605,+#_22f86235800a50801c3da6d0172dc57a | p@chr9:101727602..101727605, + |
| 3.38e-25 | FFCP PHASE2:Hg19::chr9:101727602..101727605,+#_22f86235800a50801c3da6d0172dc57a | p@chr9:101727602..101727605, + |
| 5.83e-25 | FFCP PHASE1:Hg19::chr11:102668185..102668198,-#_64709a4bdeaddacef283122ddc3cda28 | p12@MMP1 |
| 5.83e-25 | FFCP PHASE2:Hg19::chr11:102668185..102668198,-#_64709a4bdeaddacef283122ddc3cda28 | p12@MMP1 |
| 7.02e-25 | FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_b20112a2b896f274adf159666da4f348 | p@chr9:3898804..3898817, - |
| 7.02e-25 | FFCP PHASE1:Hg19::chr2:161237614..161237627,-#_b20112a2b896f274adf159666da4f348 | p@chr2:161237614..161237627, - |
| 7.02e-25 | FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_b20112a2b896f274adf159666da4f348 | p@chr9:3898804..3898817, - |
| 7.02e-25 | FFCP PHASE2:Hg19::chr2:161237614..161237627,-#_b20112a2b896f274adf159666da4f348 | p@chr2:161237614..161237627, - |
| 1.47e-23 | FFCP PHASE1:Hg19::chr3:112081052..112081065,-#_b11036b7ddd62cdc5e0c98be466502ee | p@chr3:112081052..112081065, - |
| 1.47e-23 | FFCP PHASE2:Hg19::chr3:112081052..112081065,-#_b11036b7ddd62cdc5e0c98be466502ee | p@chr3:112081052..112081065, - |
| 2.62e-23 | FFCP PHASE2:Hg19::chr12:2905221..2905228,+#_bb135476239790d962947a49c0287495 | p10@FKBP4 |
| 2.62e-23 | FFCP PHASE1:Hg19::chr14:78446572..78446582,+#_bb135476239790d962947a49c0287495 | p@chr14:78446572..78446582, + |
| 2.62e-23 | FFCP PHASE1:Hg19::chr20:30347776..30347785,+#_bb135476239790d962947a49c0287495 | p11@TPX2 |
| 2.62e-23 | FFCP PHASE2:Hg19::chr14:78446572..78446582,+#_bb135476239790d962947a49c0287495 | p@chr14:78446572..78446582, + |
| 2.62e-23 | FFCP PHASE1:Hg19::chr12:2905221..2905228,+#_bb135476239790d962947a49c0287495 | p10@FKBP4 |
| 2.62e-23 | FFCP PHASE2:Hg19::chr20:30347776..30347785,+#_bb135476239790d962947a49c0287495 | p11@TPX2 |
| 2.63e-23 | FFCP PHASE1:Hg19::chr4:74703561..74703579,+#_8aff8ee672a8fda128dce1de71cabdc5 | p@chr4:74703561..74703579, + |
| 2.63e-23 | FFCP PHASE2:Hg19::chr4:74703561..74703579,+#_8aff8ee672a8fda128dce1de71cabdc5 | p@chr4:74703561..74703579, + |
| 3.27e-23 | FFCP PHASE1:Hg19::chr6:12477856..12477863,-#_2916359e3dec79351fa8c724394479d9 | p@chr6:12477856..12477863, - |
| 3.27e-23 | FFCP PHASE1:Hg19::chr9:99220771..99220778,+#_2916359e3dec79351fa8c724394479d9 | p13@HABP4 |
| 3.27e-23 | FFCP PHASE2:Hg19::chr6:12477856..12477863,-#_2916359e3dec79351fa8c724394479d9 | p@chr6:12477856..12477863, - |
| 3.27e-23 | FFCP PHASE1:Hg19::chr8:130735268..130735270,-#_2916359e3dec79351fa8c724394479d9 | p@chr8:130735268..130735270, - |
| 3.27e-23 | FFCP PHASE2:Hg19::chr9:99220771..99220778,+#_2916359e3dec79351fa8c724394479d9 | p13@HABP4 |
| 3.27e-23 | FFCP PHASE2:Hg19::chr8:130735268..130735270,-#_2916359e3dec79351fa8c724394479d9 | p@chr8:130735268..130735270, - |
| 4.09e-23 | FFCP PHASE2:Hg19::chr7:46213930..46213940,+#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr7:46213930..46213940, + |
| 4.09e-23 | FFCP PHASE2:Hg19::chr20:22034809..22034813,+#_5c395b35734eb8f0e1c80ab233b2d0b6 | p1@ENST00000449427 |
| 4.09e-23 | FFCP PHASE2:Hg19::chr17:63686228..63686231,-#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr17:63686228..63686231, - |
| 4.09e-23 | FFCP PHASE1:Hg19::chr22:20069101..20069111,-#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr22:20069101..20069111, - |
| 4.09e-23 | FFCP PHASE1:Hg19::chr1:151101668..151101671,-#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr1:151101668..151101671, - |
| 4.09e-23 | FFCP PHASE1:Hg19::chr20:22034809..22034813,+#_5c395b35734eb8f0e1c80ab233b2d0b6 | p1@ENST00000449427 |
| 4.09e-23 | FFCP PHASE1:Hg19::chr7:46213930..46213940,+#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr7:46213930..46213940, + |
| 4.09e-23 | FFCP PHASE1:Hg19::chr17:63686228..63686231,-#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr17:63686228..63686231, - |
| 4.09e-23 | FFCP PHASE2:Hg19::chr1:151101668..151101671,-#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr1:151101668..151101671, - |
| 4.09e-23 | FFCP PHASE2:Hg19::chr22:20069101..20069111,-#_5c395b35734eb8f0e1c80ab233b2d0b6 | p@chr22:20069101..20069111, - |
| 1.09e-22 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_db27c81f1b3e57ca974e624e0ded15c8 | p@chr6:53359400..53359406, + |
| 1.09e-22 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_db27c81f1b3e57ca974e624e0ded15c8 | p@chr6:53359400..53359406, + |
| 1.58e-21 | FFCP PHASE1:Hg19::chr9:118916228..118916241,+#_3990d1c00beb424144addb2e6c621088 | p18@PAPPA |
| 1.58e-21 | FFCP PHASE2:Hg19::chr9:118916228..118916241,+#_3990d1c00beb424144addb2e6c621088 | p18@PAPPA |
| 1.59e-21 | FFCP PHASE2:Hg19::chr11:102661460..102661475,-#_402114bef6ab41338a9eb71bca377c75 | p@chr11:102661460..102661475, - |
| 1.59e-21 | FFCP PHASE1:Hg19::chr11:102661460..102661475,-#_402114bef6ab41338a9eb71bca377c75 | p@chr11:102661460..102661475, - |
| 2.71e-21 | FFCP PHASE1:Hg19::chr14:45251956..45251976,-#_9a97196b38f5f2200df8f79d5f697066 | p1@ENST00000556405 |
| 2.71e-21 | FFCP PHASE2:Hg19::chr14:45251956..45251976,-#_9a97196b38f5f2200df8f79d5f697066 | p1@ENST00000556405 |
| 3.12e-20 | FFCP PHASE1:Hg19::chr3:120365866..120365885,-#_c47dfb41e53fb7251c98f44b923fefaf | p@chr3:120365866..120365885, - |
| 3.12e-20 | FFCP PHASE2:Hg19::chr3:120365866..120365885,-#_c47dfb41e53fb7251c98f44b923fefaf | p@chr3:120365866..120365885, - |
| 3.86e-20 | FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_741c455e769fa5c67993f810b34786ff | p8@MICAL2 |
| 3.86e-20 | FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_741c455e769fa5c67993f810b34786ff | p8@MICAL2 |
| 8.43e-20 | FFCP PHASE1:Hg19::chr1:94798754..94798777,+#_be8cad99b80b4225666f5ca2514b5567 | p1@ENST00000418242 |
| 8.43e-20 | FFCP PHASE2:Hg19::chr1:94798754..94798777,+#_be8cad99b80b4225666f5ca2514b5567 | p1@ENST00000418242 |
