CL:0000842: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000842
|name=mononuclear cell
|namespace=cell
|def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add]
|xref=BTO:0000878;;FMA:867...") |
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|id=CL:0000842 | |id=CL:0000842 | ||
|name=mononuclear cell | |name=mononuclear cell | ||
|namespace= | |namespace=efo | ||
|def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add] | |def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add] | ||
|xref=BTO:0000878;;FMA:86713 | |xref=BTO:0000878;;FMA:86713 | ||
|is_a=CL:0000224;;CL:0002087 | |is_a=CL:0000224;;CL:0000738;;CL:0002087 | ||
|synonym=" | |synonym="peripheral blood mononuclear cell" NARROW [] | ||
|comment= | |comment= | ||
|alt_id= | |alt_id= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:39, 15 June 2012
| Name: | mononuclear cell | ||
|---|---|---|---|
| Namespace: | efo | ||
| Definition: | "A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add] | ||
| Xrefs: |
| ||
| Synonyms: | "peripheral blood mononuclear cell" NARROW [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000224(),CL:0000738(leukocyte),CL:0002087(nongranular leukocyte) |
|---|
Children
| derives from: | FF:0000135 (human peripheral blood mononuclear cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
- 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
- 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)
Mouse (Mus musculus)
- 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
- 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
- 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000842 (mononuclear cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.43e-65 | FFCP PHASE1:Hg19::chr3:16337109..16337111,+#_ed1fdaf9a344543cabf875510d9acedb | p@chr3:16337109..16337111, + |
| 1.43e-65 | FFCP PHASE2:Hg19::chr3:16337109..16337111,+#_ed1fdaf9a344543cabf875510d9acedb | p@chr3:16337109..16337111, + |
| 1.83e-59 | FFCP PHASE1:Hg19::chr9:132536282..132536289,+#_f951fd1c8a45f7579ca439c08015072e | p@chr9:132536282..132536289, + |
| 1.83e-59 | FFCP PHASE2:Hg19::chr9:132536282..132536289,+#_f951fd1c8a45f7579ca439c08015072e | p@chr9:132536282..132536289, + |
| 1.83e-59 | FFCP PHASE1:Hg19::chr1:25238094..25238098,+#_f951fd1c8a45f7579ca439c08015072e | p@chr1:25238094..25238098, + |
| 1.83e-59 | FFCP PHASE2:Hg19::chr1:25238094..25238098,+#_f951fd1c8a45f7579ca439c08015072e | p@chr1:25238094..25238098, + |
| 3.13e-54 | FFCP PHASE1:Hg19::chr22:30673870..30673880,+#_f9effebd5afe7a4413ad2ae5c78b4833 | p@chr22:30673870..30673880, + |
| 3.13e-54 | FFCP PHASE2:Hg19::chr22:30673870..30673880,+#_f9effebd5afe7a4413ad2ae5c78b4833 | p@chr22:30673870..30673880, + |
| 6.5e-54 | FFCP PHASE1:Hg19::chr8:27265868..27265877,-#_32ab75ce35d4aaf6f491232f0c9be9a4 | p@chr8:27265868..27265877, - |
| 6.5e-54 | FFCP PHASE2:Hg19::chr8:27265868..27265877,-#_32ab75ce35d4aaf6f491232f0c9be9a4 | p@chr8:27265868..27265877, - |
| 1.97e-49 | FFCP PHASE1:Hg19::chr17:74593998..74594009,-#_ea7a096e309c8aa30cdde1e58def2b1c | p@chr17:74593998..74594009, - |
| 1.97e-49 | FFCP PHASE2:Hg19::chr17:74593998..74594009,-#_ea7a096e309c8aa30cdde1e58def2b1c | p@chr17:74593998..74594009, - |
| 2.33e-49 | FFCP PHASE1:Hg19::chr13:31288341..31288344,-#_32a43d00f11fd4f68c40b529e0159fbe | p@chr13:31288341..31288344, - |
| 2.33e-49 | FFCP PHASE2:Hg19::chr13:31288341..31288344,-#_32a43d00f11fd4f68c40b529e0159fbe | p@chr13:31288341..31288344, - |
| 3.06e-46 | FFCP PHASE1:Hg19::chr20:23136099..23136105,+#_0ca4cf5116f7ca2b374384717519319a | p@chr20:23136099..23136105, + |
| 3.06e-46 | FFCP PHASE2:Hg19::chr20:23136099..23136105,+#_0ca4cf5116f7ca2b374384717519319a | p@chr20:23136099..23136105, + |
| 1.23e-45 | FFCP PHASE1:Hg19::chr5:53967032..53967048,-#_96f71b6bf8a9c8b8b4b9e72b5c0c14dd | p@chr5:53967032..53967048, - |
| 1.23e-45 | FFCP PHASE2:Hg19::chr5:53967032..53967048,-#_96f71b6bf8a9c8b8b4b9e72b5c0c14dd | p@chr5:53967032..53967048, - |
| 1.67e-45 | FFCP PHASE2:Hg19::chr17:80085705..80085716,-#_9fd25f7070ee312c8e3aa2328035f604 | p@chr17:80085705..80085716, - |
| 1.67e-45 | FFCP PHASE1:Hg19::chr17:80085705..80085716,-#_9fd25f7070ee312c8e3aa2328035f604 | p@chr17:80085705..80085716, - |
| 2.38e-44 | FFCP PHASE2:Hg19::chr6:14598755..14598797,-#_1431b914c70fa3c099ec35f6a3918d37 | p@chr6:14598755..14598797, - |
| 2.38e-44 | FFCP PHASE1:Hg19::chr6:14598755..14598797,-#_1431b914c70fa3c099ec35f6a3918d37 | p@chr6:14598755..14598797, - |
| 1.43e-42 | FFCP PHASE1:Hg19::chr4:26220615..26220664,-#_ad40f1cad914a1e2db0d66e099916c32 | p@chr4:26220615..26220664, - |
| 1.43e-42 | FFCP PHASE2:Hg19::chr4:26220615..26220664,-#_ad40f1cad914a1e2db0d66e099916c32 | p@chr4:26220615..26220664, - |
| 2.54e-42 | FFCP PHASE1:Hg19::chr2:242051009..242051013,+#_edfb7f8771095ff61116d4c1c928c3e3 | p@chr2:242051009..242051013, + |
| 2.54e-42 | FFCP PHASE2:Hg19::chr13:31289054..31289070,+#_edfb7f8771095ff61116d4c1c928c3e3 | p@chr13:31289054..31289070, + |
| 2.54e-42 | FFCP PHASE2:Hg19::chr2:242051009..242051013,+#_edfb7f8771095ff61116d4c1c928c3e3 | p@chr2:242051009..242051013, + |
| 2.54e-42 | FFCP PHASE1:Hg19::chr13:31289054..31289070,+#_edfb7f8771095ff61116d4c1c928c3e3 | p@chr13:31289054..31289070, + |
| 2.56e-40 | FFCP PHASE2:Hg19::chr9:132543512..132543535,-#_e10d4915cb3de6656b9b8eebfb0bfcaa | p@chr9:132543512..132543535, - |
| 2.56e-40 | FFCP PHASE1:Hg19::chr9:132543512..132543535,-#_e10d4915cb3de6656b9b8eebfb0bfcaa | p@chr9:132543512..132543535, - |
| 3.35e-40 | FFCP PHASE1:Hg19::chr21:16251857..16251872,-#_1507b7e007af1f273b23f29a3cb15ad8 | p@chr21:16251857..16251872, - |
| 3.35e-40 | FFCP PHASE2:Hg19::chr21:16251857..16251872,-#_1507b7e007af1f273b23f29a3cb15ad8 | p@chr21:16251857..16251872, - |
| 5.01e-40 | FFCP PHASE2:Hg19::chr7:106039339..106039343,-#_189005100ce7cac0032b30ef237d8ba9 | p@chr7:106039339..106039343, - |
| 5.01e-40 | FFCP PHASE1:Hg19::chr7:106039339..106039343,-#_189005100ce7cac0032b30ef237d8ba9 | p@chr7:106039339..106039343, - |
| 1.12e-39 | FFCP PHASE1:Hg19::chr16:81476783..81476798,+#_a67064cf946e6081684232749345bb1b | p@chr16:81476783..81476798, + |
| 1.12e-39 | FFCP PHASE2:Hg19::chr16:81476783..81476798,+#_a67064cf946e6081684232749345bb1b | p@chr16:81476783..81476798, + |
| 3.48e-38 | FFCP PHASE1:Hg19::chr16:11655016..11655021,+#_8019d2a61dee23a12754aa0e2d79534f | p@chr16:11655016..11655021, + |
| 3.48e-38 | FFCP PHASE2:Hg19::chr16:11655016..11655021,+#_8019d2a61dee23a12754aa0e2d79534f | p@chr16:11655016..11655021, + |
| 4.67e-38 | FFCP PHASE1:Hg19::chr5:53972410..53972425,-#_d61541b83616137933372ad8afdb55dd | p@chr5:53972410..53972425, - |
| 4.67e-38 | FFCP PHASE1:Hg19::chr10:125795831..125795840,+#_d61541b83616137933372ad8afdb55dd | p@chr10:125795831..125795840, + |
| 4.67e-38 | FFCP PHASE2:Hg19::chr10:125795831..125795840,+#_d61541b83616137933372ad8afdb55dd | p@chr10:125795831..125795840, + |
| 4.67e-38 | FFCP PHASE2:Hg19::chr5:53972410..53972425,-#_d61541b83616137933372ad8afdb55dd | p@chr5:53972410..53972425, - |
| 4.67e-38 | FFCP PHASE2:Hg19::chr10:29922542..29922549,+#_d61541b83616137933372ad8afdb55dd | p@chr10:29922542..29922549, + |
| 4.67e-38 | FFCP PHASE1:Hg19::chr10:29922542..29922549,+#_d61541b83616137933372ad8afdb55dd | p@chr10:29922542..29922549, + |
| 7.42e-38 | FFCP PHASE2:Hg19::chr9:110250603..110250614,-#_5f161a6cf03a71b5f82c39184abb2613 | p24@KLF4 |
| 7.42e-38 | FFCP PHASE1:Hg19::chr9:110250603..110250614,-#_5f161a6cf03a71b5f82c39184abb2613 | p24@KLF4 |
| 1.23e-37 | FFCP PHASE1:Hg19::chr9:93847742..93847748,-#_d2bf7a8867be60453e6b9187ea54d8bb | p@chr9:93847742..93847748, - |
| 1.23e-37 | FFCP PHASE2:Hg19::chr9:93847742..93847748,-#_d2bf7a8867be60453e6b9187ea54d8bb | p@chr9:93847742..93847748, - |
| 2.03e-37 | FFCP PHASE1:Hg19::chr13:114908634..114908638,-#_c30ea4eeebc2254989b976df9810c399 | p@chr13:114908634..114908638, - |
| 2.03e-37 | FFCP PHASE2:Hg19::chr13:114908634..114908638,-#_c30ea4eeebc2254989b976df9810c399 | p@chr13:114908634..114908638, - |
| 3.79e-37 | FFCP PHASE2:Hg19::chr5:171535614..171535618,-#_9dadadcf430a3757bb177872d7b9e84f | p9@STK10 |
| 3.79e-37 | FFCP PHASE1:Hg19::chr5:171535614..171535618,-#_9dadadcf430a3757bb177872d7b9e84f | p9@STK10 |
| 6.23e-37 | FFCP PHASE2:Hg19::chr22:50740830..50740842,+#_5742be9e6ef5c2f43386abc51da669e9 | p@chr22:50740830..50740842, + |
| 6.23e-37 | FFCP PHASE1:Hg19::chr22:50740830..50740842,+#_5742be9e6ef5c2f43386abc51da669e9 | p@chr22:50740830..50740842, + |
| 1.4e-35 | FFCP PHASE1:Hg19::chr11:693022..693033,-#_f7a0cc822920422d00f9af6529f71dbd | p@chr11:693022..693033, - |
| 1.4e-35 | FFCP PHASE2:Hg19::chr11:693022..693033,-#_f7a0cc822920422d00f9af6529f71dbd | p@chr11:693022..693033, - |
| 1.77e-35 | FFCP PHASE1:Hg19::chr8:29953118..29953123,+#_fba92426f9155f9cf7aac46f5568faa6 | p7@LEPROTL1 |
| 1.77e-35 | FFCP PHASE2:Hg19::chr8:29953118..29953123,+#_fba92426f9155f9cf7aac46f5568faa6 | p7@LEPROTL1 |
| 2.85e-35 | FFCP PHASE1:Hg19::chr17:80084484..80084497,-#_0793aa17bdec9d40021d677459c46d6c | p@chr17:80084484..80084497, - |
| 2.85e-35 | FFCP PHASE2:Hg19::chr17:80084484..80084497,-#_0793aa17bdec9d40021d677459c46d6c | p@chr17:80084484..80084497, - |
| 3.2e-35 | FFCP PHASE2:Hg19::chr3:101568018..101568039,-#_7bb74666775f607f0c9410ae5e5e4fa8 | p@chr3:101568018..101568039, - |
| 3.2e-35 | FFCP PHASE1:Hg19::chr3:101568018..101568039,-#_7bb74666775f607f0c9410ae5e5e4fa8 | p@chr3:101568018..101568039, - |
| 4.05e-35 | FFCP PHASE1:Hg19::chr17:80085735..80085746,-#_d3cb9d17e021de8bca3ab923cb88fd17 | p@chr17:80085735..80085746, - |
| 4.05e-35 | FFCP PHASE2:Hg19::chr17:80085735..80085746,-#_d3cb9d17e021de8bca3ab923cb88fd17 | p@chr17:80085735..80085746, - |
| 4.56e-35 | FFCP PHASE2:Hg19::chr19:58838845..58838863,-#_1e240d9ae6a6dcc9a2ccbb58deb2e76d | p@chr19:58838845..58838863, - |
| 4.56e-35 | FFCP PHASE1:Hg19::chr19:58838845..58838863,-#_1e240d9ae6a6dcc9a2ccbb58deb2e76d | p@chr19:58838845..58838863, - |
| 5.76e-35 | FFCP PHASE1:Hg19::chr19:52239330..52239340,-#_0fb56bdfbcac5e49f00bf49adaa3d77a | p@chr19:52239330..52239340, - |
| 5.76e-35 | FFCP PHASE2:Hg19::chr19:52239330..52239340,-#_0fb56bdfbcac5e49f00bf49adaa3d77a | p@chr19:52239330..52239340, - |
| 3.33e-34 | FFCP PHASE1:Hg19::chr12:98831630..98831637,-#_a480b89c7319ac76ab58ffec1dd95b26 | p@chr12:98831630..98831637, - |
| 3.33e-34 | FFCP PHASE2:Hg19::chr12:98831630..98831637,-#_a480b89c7319ac76ab58ffec1dd95b26 | p@chr12:98831630..98831637, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:73538946..73538954,+#_08e265befba56cbfa8ae2c44de9da912 | p@chr10:73538946..73538954, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:73538946..73538954,+#_08e265befba56cbfa8ae2c44de9da912 | p@chr10:73538946..73538954, + |
| 7.7e-34 | FFCP PHASE1:Hg19::chr10:32040654..32040692,+#_607e3a2dfe47f9bfc04e5e43f1a455e8 | p@chr10:32040654..32040692, + |
| 7.7e-34 | FFCP PHASE2:Hg19::chr2:85923157..85923172,-#_607e3a2dfe47f9bfc04e5e43f1a455e8 | p@chr2:85923157..85923172, - |
| 7.7e-34 | FFCP PHASE1:Hg19::chr2:85923157..85923172,-#_607e3a2dfe47f9bfc04e5e43f1a455e8 | p@chr2:85923157..85923172, - |
| 7.7e-34 | FFCP PHASE2:Hg19::chr10:32040654..32040692,+#_607e3a2dfe47f9bfc04e5e43f1a455e8 | p@chr10:32040654..32040692, + |
| 1.08e-33 | FFCP PHASE1:Hg19::chr1:12662045..12662059,-#_dc729897d621638f45b0fac991585dcb | p@chr1:12662045..12662059, - |
| 1.08e-33 | FFCP PHASE2:Hg19::chr1:12662045..12662059,-#_dc729897d621638f45b0fac991585dcb | p@chr1:12662045..12662059, - |
| 1.08e-33 | FFCP PHASE1:Hg19::chr17:80085902..80085908,+#_dc729897d621638f45b0fac991585dcb | p@chr17:80085902..80085908, + |
| 1.08e-33 | FFCP PHASE2:Hg19::chr17:80085902..80085908,+#_dc729897d621638f45b0fac991585dcb | p@chr17:80085902..80085908, + |
| 1.18e-33 | FFCP PHASE1:Hg19::chr1:235116230..235116241,-#_c5e65c0d6d71e6fb954ce2fb53058c1b | p@chr1:235116230..235116241, - |
| 1.18e-33 | FFCP PHASE2:Hg19::chr1:235116230..235116241,-#_c5e65c0d6d71e6fb954ce2fb53058c1b | p@chr1:235116230..235116241, - |
| 1.27e-33 | FFCP PHASE1:Hg19::chr14:62036506..62036511,-#_d043ed7350e0489390d501f77b66a867 | p@chr14:62036506..62036511, - |
| 1.27e-33 | FFCP PHASE2:Hg19::chr14:62036506..62036511,-#_d043ed7350e0489390d501f77b66a867 | p@chr14:62036506..62036511, - |
| 1.48e-33 | FFCP PHASE2:Hg19::chr4:15964231..15964260,+#_019b45b4d3466b3651f773fc9678d252 | p1@CU693033 |
| 1.48e-33 | FFCP PHASE1:Hg19::chr4:15964231..15964260,+#_019b45b4d3466b3651f773fc9678d252 | p1@CU693033 |
| 1.65e-33 | FFCP PHASE2:Hg19::chr12:10564247..10564267,-#_5a7dabc0d4be14e8c4ee413bceec56d0 | p@chr12:10564247..10564267, - |
| 1.65e-33 | FFCP PHASE1:Hg19::chr12:10564247..10564267,-#_5a7dabc0d4be14e8c4ee413bceec56d0 | p@chr12:10564247..10564267, - |
| 2.07e-33 | FFCP PHASE2:Hg19::chr10:126339660..126339674,+#_07bd07c766a0e5097ef1843ec13d4acd | p@chr10:126339660..126339674, + |
| 2.07e-33 | FFCP PHASE1:Hg19::chr10:126339660..126339674,+#_07bd07c766a0e5097ef1843ec13d4acd | p@chr10:126339660..126339674, + |
| 2.31e-33 | FFCP PHASE2:Hg19::chr9:136709727..136709738,+#_a033463902ec0edc9d5047629312a06f | p@chr9:136709727..136709738, + |
| 2.31e-33 | FFCP PHASE1:Hg19::chr7:3157659..3157673,-#_a033463902ec0edc9d5047629312a06f | p@chr7:3157659..3157673, - |
| 2.31e-33 | FFCP PHASE2:Hg19::chr7:3157659..3157673,-#_a033463902ec0edc9d5047629312a06f | p@chr7:3157659..3157673, - |
| 2.31e-33 | FFCP PHASE1:Hg19::chr9:136709727..136709738,+#_a033463902ec0edc9d5047629312a06f | p@chr9:136709727..136709738, + |
| 2.58e-33 | FFCP PHASE2:Hg19::chr17:80840881..80840895,+#_660e338fe412748f7296df6ade1dbf33 | p@chr17:80840881..80840895, + |
| 2.58e-33 | FFCP PHASE1:Hg19::chr17:80840881..80840895,+#_660e338fe412748f7296df6ade1dbf33 | p@chr17:80840881..80840895, + |
| 2.58e-33 | FFCP PHASE1:Hg19::chr11:118741219..118741230,+#_660e338fe412748f7296df6ade1dbf33 | p@chr11:118741219..118741230, + |
| 2.58e-33 | FFCP PHASE2:Hg19::chr11:118741219..118741230,+#_660e338fe412748f7296df6ade1dbf33 | p@chr11:118741219..118741230, + |
| 3.61e-33 | FFCP PHASE1:Hg19::chr16:81557949..81557960,-#_0e80e2972dd43cb420ec22cad8c502bf | p@chr16:81557949..81557960, - |
| 3.61e-33 | FFCP PHASE2:Hg19::chr16:81557949..81557960,-#_0e80e2972dd43cb420ec22cad8c502bf | p@chr16:81557949..81557960, - |
