CL:0000502: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0000502
|name=type D enteroendocrine cell
|namespace=cell
|def="A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostat...") |
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Revision as of 17:37, 15 June 2012
| Name: | type D enteroendocrine cell | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostatin in both an endocrine and paracrine manner. Somatostatin inhibits gastrin, cholecystokinin, insulin, glucagon, pancreatic enzymes, and gastric hydrochloric acid. A variety of substances which inhibit gastric acid secretion (vasoactive intestinal peptide, calcitonin gene-related peptide, cholecystokinin, beta-adrenergic agonists, and gastric inhibitory peptide) are thought to act by releasing somatostatin." [MESH:A.03.492.766.440.175] | ||
| Xrefs: |
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| Synonyms: | "D cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000164(enteroendocrine cell),CL:0000172(somatostatin secreting cell) |
|---|
Children
| is a: | CL:0000173 (pancreatic D cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10781-110G7 (somatostatinoma cell line:QGP-1)
Mouse (Mus musculus)
- 10781-110G7 (somatostatinoma cell line:QGP-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000502 (type D enteroendocrine cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:120200137..120200154,+#_3a9a11466ed203209add935a85df3b37 | p@chr10:120200137..120200154, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:120200137..120200154,+#_3a9a11466ed203209add935a85df3b37 | p@chr10:120200137..120200154, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193186161..193186169,-#_3a9a11466ed203209add935a85df3b37 | p@chr1:193186161..193186169, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:96678236..96678246,-#_3a9a11466ed203209add935a85df3b37 | p@chr9:96678236..96678246, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr20:20173664..20173680,+#_3a9a11466ed203209add935a85df3b37 | p@chr20:20173664..20173680, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:50692244..50692251,+#_3a9a11466ed203209add935a85df3b37 | p@chr6:50692244..50692251, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:77257468..77257474,-#_3a9a11466ed203209add935a85df3b37 | p@chr9:77257468..77257474, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193232144..193232147,+#_3a9a11466ed203209add935a85df3b37 | p@chr1:193232144..193232147, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr20:20173664..20173680,+#_3a9a11466ed203209add935a85df3b37 | p@chr20:20173664..20173680, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:96678236..96678246,-#_3a9a11466ed203209add935a85df3b37 | p@chr9:96678236..96678246, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193186161..193186169,-#_3a9a11466ed203209add935a85df3b37 | p@chr1:193186161..193186169, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:70464665..70464668,+#_3a9a11466ed203209add935a85df3b37 | p@chr12:70464665..70464668, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:77257468..77257474,-#_3a9a11466ed203209add935a85df3b37 | p@chr9:77257468..77257474, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193232079..193232084,+#_3a9a11466ed203209add935a85df3b37 | p@chr1:193232079..193232084, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:70464665..70464668,+#_3a9a11466ed203209add935a85df3b37 | p@chr12:70464665..70464668, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:56815879..56815901,+#_3a9a11466ed203209add935a85df3b37 | p@chr18:56815879..56815901, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:56815879..56815901,+#_3a9a11466ed203209add935a85df3b37 | p@chr18:56815879..56815901, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193232079..193232084,+#_3a9a11466ed203209add935a85df3b37 | p@chr1:193232079..193232084, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:50692244..50692251,+#_3a9a11466ed203209add935a85df3b37 | p@chr6:50692244..50692251, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193232144..193232147,+#_3a9a11466ed203209add935a85df3b37 | p@chr1:193232144..193232147, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:154858221..154858224,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr6:154858221..154858224, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:173014804..173014812,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr4:173014804..173014812, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:70464593..70464598,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr12:70464593..70464598, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr9:77257424..77257435,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr9:77257424..77257435, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:161970049..161970057,-#_9195cecf6fa326765be33afa6a4f8306 | p3@GU361471 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:193232096..193232117,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr1:193232096..193232117, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:70464593..70464598,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr12:70464593..70464598, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:154858221..154858224,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr6:154858221..154858224, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:173014804..173014812,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr4:173014804..173014812, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:154858237..154858245,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr6:154858237..154858245, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr9:77257424..77257435, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:193186195..193186210,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr1:193186195..193186210, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:161970049..161970057,-#_9195cecf6fa326765be33afa6a4f8306 | p3@GU361471 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr4:59982412..59982425, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:154858237..154858245,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr6:154858237..154858245, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr4:59982412..59982425, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr18:56813724..56813731,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr18:56813724..56813731, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:193186195..193186210,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr1:193186195..193186210, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr18:56813724..56813731,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr18:56813724..56813731, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:139208173..139208199,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr4:139208173..139208199, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:70464675..70464680,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr12:70464675..70464680, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:193232096..193232117,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr1:193232096..193232117, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:70464675..70464680,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr12:70464675..70464680, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:139208173..139208199,-#_9195cecf6fa326765be33afa6a4f8306 | p@chr4:139208173..139208199, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr18:7955271..7955280,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr18:7955271..7955280, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr18:7955271..7955280,+#_9195cecf6fa326765be33afa6a4f8306 | p@chr18:7955271..7955280, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:56816249..56816258,+#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr18:56816249..56816258, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:56816249..56816258,+#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr18:56816249..56816258, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:93508642..93508652,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr13:93508642..93508652, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:154858334..154858342,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr6:154858334..154858342, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:93508642..93508652,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr13:93508642..93508652, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:132980338..132980346,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr6:132980338..132980346, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:154858334..154858342,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr6:154858334..154858342, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:110661599..110661609,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr1:110661599..110661609, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:132980338..132980346,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr6:132980338..132980346, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:110661599..110661609,-#_09bd09f45cb69e70a2a3a41e9c2ba07f | p@chr1:110661599..110661609, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:128108552..128108561,+#_5a242fd9b38f470e3f5649832a88df58 | p1@ENST00000537470 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr18:56815158..56815162,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr18:56815158..56815162, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr18:56815158..56815162,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr18:56815158..56815162, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:127385138..127385144,-#_5a242fd9b38f470e3f5649832a88df58 | p@chr12:127385138..127385144, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:128108552..128108561,+#_5a242fd9b38f470e3f5649832a88df58 | p1@ENST00000537470 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:110678110..110678115,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr1:110678110..110678115, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:70464652..70464662,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr12:70464652..70464662, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:127385138..127385144,-#_5a242fd9b38f470e3f5649832a88df58 | p@chr12:127385138..127385144, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr18:7955176..7955183,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr18:7955176..7955183, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr18:7955176..7955183,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr18:7955176..7955183, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:70464652..70464662,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr12:70464652..70464662, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:110678228..110678236,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr1:110678228..110678236, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:110678228..110678236,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr1:110678228..110678236, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:7570269..7570273,+#_5a242fd9b38f470e3f5649832a88df58 | p13@C19orf45 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr9:77257683..77257703,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr9:77257683..77257703, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:7570269..7570273,+#_5a242fd9b38f470e3f5649832a88df58 | p13@C19orf45 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:110678110..110678115,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr1:110678110..110678115, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr9:77257683..77257703,+#_5a242fd9b38f470e3f5649832a88df58 | p@chr9:77257683..77257703, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:120381641..120381650,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr7:120381641..120381650, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:92459318..92459327,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr15:92459318..92459327, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr18:56816267..56816276,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr18:56816267..56816276, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr18:56816267..56816276,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr18:56816267..56816276, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:159855059..159855068,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr2:159855059..159855068, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:3310694..3310716,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr4:3310694..3310716, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr5:77683792..77683799, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:104246731..104246738,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p3@ENST00000524336 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:159855059..159855068,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr2:159855059..159855068, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr4:3310694..3310716, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr1:165198157..165198181, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr13:93587956..93587973,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr13:93587956..93587973, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr5:77683792..77683799, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:120381641..120381650,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr7:120381641..120381650, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:104246731..104246738,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p3@ENST00000524336 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr13:93587956..93587973,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr13:93587956..93587973, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:128077388..128077416,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr12:128077388..128077416, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:92459318..92459327,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr15:92459318..92459327, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr1:165198157..165198181, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:128077388..128077416,+#_81b8ad2250cb0e568ad28ab0caf86de4 | p@chr12:128077388..128077416, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr19:51412411..51412426,-#_5f4b31e4c8ae92b9701615383b096001 | p4@KLK4 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr14:101165430..101165451,-#_5f4b31e4c8ae92b9701615383b096001 | p@chr14:101165430..101165451, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr20:11077086..11077098,+#_5f4b31e4c8ae92b9701615383b096001 | p@chr20:11077086..11077098, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr14:101165430..101165451,-#_5f4b31e4c8ae92b9701615383b096001 | p@chr14:101165430..101165451, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:100807523..100807543,+#_5f4b31e4c8ae92b9701615383b096001 | p@chr7:100807523..100807543, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:120778453..120778458,-#_5f4b31e4c8ae92b9701615383b096001 | p@chr7:120778453..120778458, - |
