CL:0000081: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000081
|name=blood cell
|namespace=cell
|def="A cell found predominately in the blood." [GOC:add, GOC:tfm]
|xref=fma:62844
|is_a=CL:0000988
|synonym=
|com...") |
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|id=CL:0000081 | |id=CL:0000081 | ||
|name=blood cell | |name=blood cell | ||
|namespace= | |namespace=efo | ||
|def="A cell found predominately in the blood." [GOC:add, GOC:tfm] | |def="A cell found predominately in the blood." [GOC:add, GOC:tfm] | ||
|xref= | |xref=FMA:62844 | ||
|is_a=CL:0000988 | |is_a=CL:0000988 | ||
|synonym= | |synonym= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
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Revision as of 17:36, 15 June 2012
| Name: | blood cell | ||
|---|---|---|---|
| Namespace: | efo | ||
| Definition: | "A cell found predominately in the blood." [GOC:add, GOC:tfm] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000988(hematopoietic cell) |
|---|
Children
| is a: | CL:0000094 (granulocyte),FF:0000282 (Whole blood depleted of CD14-positive and CD15-positive cells (pluriselect depleted)),FF:0000283 (Whole blood depleted of CD19+ cells (pluriselect depleted)),FF:0000284 (Whole blood depleted of CD4+ and CD8+ cells (pluriselect depleted)),FF:10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C)) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
- 11233-116C9 (Neutrophils, donor1)
- 11314-117C9 (Neutrophils, donor2)
- 11390-118C4 (Neutrophils, donor3)
- 11542-120B3
- 11546-120B7
- 11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
- 11622-122B2
- 11626-122B6
- 11629-122B9 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2)
... further results Mouse (Mus musculus)
- 10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
- 11233-116C9 (Neutrophils, donor1)
- 11314-117C9 (Neutrophils, donor2)
- 11390-118C4 (Neutrophils, donor3)
- 11542-120B3
- 11546-120B7
- 11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
- 11622-122B2
- 11626-122B6
- 11629-122B9 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000081 (blood cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.22e-107 | FFCP PHASE1:Hg19::chr12:3827524..3827527,+#_674f4c779f1976debc44da011f55892a | p@chr12:3827524..3827527, + |
| 5.22e-107 | FFCP PHASE2:Hg19::chr12:3827524..3827527,+#_674f4c779f1976debc44da011f55892a | p@chr12:3827524..3827527, + |
| 5.22e-107 | FFCP PHASE1:Hg19::chr10:73530674..73530683,-#_674f4c779f1976debc44da011f55892a | p@chr10:73530674..73530683, - |
| 5.22e-107 | FFCP PHASE2:Hg19::chr10:73530674..73530683,-#_674f4c779f1976debc44da011f55892a | p@chr10:73530674..73530683, - |
| 2.9e-97 | FFCP PHASE2:Hg19::chr11:67055888..67055896,-#_6ac9e7a1c936bc8ac083bbc54562abdb | p@chr11:67055888..67055896, - |
| 2.9e-97 | FFCP PHASE1:Hg19::chr11:67055888..67055896,-#_6ac9e7a1c936bc8ac083bbc54562abdb | p@chr11:67055888..67055896, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr8:133774199..133774210,-#_e41f2556c0fa201361ba085d1a977291 | p@chr8:133774199..133774210, - |
| 1.93e-89 | FFCP PHASE2:Hg19::chr1:182367189..182367199,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:182367189..182367199, + |
| 1.93e-89 | FFCP PHASE1:Hg19::chr1:206731759..206731770,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:206731759..206731770, + |
| 1.93e-89 | FFCP PHASE1:Hg19::chr2:120967889..120967892,-#_e41f2556c0fa201361ba085d1a977291 | p@chr2:120967889..120967892, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr17:80187468..80187472,+#_e41f2556c0fa201361ba085d1a977291 | p@chr17:80187468..80187472, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr2:70246139..70246146,-#_e41f2556c0fa201361ba085d1a977291 | p@chr2:70246139..70246146, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr15:90579320..90579331,-#_e41f2556c0fa201361ba085d1a977291 | p@chr15:90579320..90579331, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr11:1865720..1865724,+#_e41f2556c0fa201361ba085d1a977291 | p@chr11:1865720..1865724, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr12:8720206..8720211,-#_e41f2556c0fa201361ba085d1a977291 | p4@ENST00000542819 |
| 1.93e-89 | FFCP PHASE2:Hg19::chr8:133774199..133774210,-#_e41f2556c0fa201361ba085d1a977291 | p@chr8:133774199..133774210, - |
| 1.93e-89 | FFCP PHASE2:Hg19::chr2:120967889..120967892,-#_e41f2556c0fa201361ba085d1a977291 | p@chr2:120967889..120967892, - |
| 1.93e-89 | FFCP PHASE2:Hg19::chr1:27155357..27155367,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:27155357..27155367, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr7:128048285..128048310,-#_e41f2556c0fa201361ba085d1a977291 | p@chr7:128048285..128048310, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr1:27155357..27155367,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:27155357..27155367, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr11:1865720..1865724,+#_e41f2556c0fa201361ba085d1a977291 | p@chr11:1865720..1865724, + |
| 1.93e-89 | FFCP PHASE1:Hg19::chr2:103106370..103106380,+#_e41f2556c0fa201361ba085d1a977291 | p@chr2:103106370..103106380, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr17:80187468..80187472,+#_e41f2556c0fa201361ba085d1a977291 | p@chr17:80187468..80187472, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr2:120967895..120967903,-#_e41f2556c0fa201361ba085d1a977291 | p@chr2:120967895..120967903, - |
| 1.93e-89 | FFCP PHASE2:Hg19::chr2:103106370..103106380,+#_e41f2556c0fa201361ba085d1a977291 | p@chr2:103106370..103106380, + |
| 1.93e-89 | FFCP PHASE1:Hg19::chr7:128048285..128048310,-#_e41f2556c0fa201361ba085d1a977291 | p@chr7:128048285..128048310, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr2:70246139..70246146,-#_e41f2556c0fa201361ba085d1a977291 | p@chr2:70246139..70246146, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr1:208712347..208712354,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:208712347..208712354, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr1:206731759..206731770,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:206731759..206731770, + |
| 1.93e-89 | FFCP PHASE1:Hg19::chr14:88469399..88469404,-#_e41f2556c0fa201361ba085d1a977291 | p@chr14:88469399..88469404, - |
| 1.93e-89 | FFCP PHASE2:Hg19::chr14:88469399..88469404,-#_e41f2556c0fa201361ba085d1a977291 | p@chr14:88469399..88469404, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr12:8720206..8720211,-#_e41f2556c0fa201361ba085d1a977291 | p4@ENST00000542819 |
| 1.93e-89 | FFCP PHASE2:Hg19::chr15:90579320..90579331,-#_e41f2556c0fa201361ba085d1a977291 | p@chr15:90579320..90579331, - |
| 1.93e-89 | FFCP PHASE1:Hg19::chr1:182367189..182367199,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:182367189..182367199, + |
| 1.93e-89 | FFCP PHASE1:Hg19::chr2:120967895..120967903,-#_e41f2556c0fa201361ba085d1a977291 | p@chr2:120967895..120967903, - |
| 1.93e-89 | FFCP PHASE2:Hg19::chr7:112062470..112062479,+#_e41f2556c0fa201361ba085d1a977291 | p@chr7:112062470..112062479, + |
| 1.93e-89 | FFCP PHASE1:Hg19::chr7:112062470..112062479,+#_e41f2556c0fa201361ba085d1a977291 | p@chr7:112062470..112062479, + |
| 1.93e-89 | FFCP PHASE2:Hg19::chr1:208712347..208712354,+#_e41f2556c0fa201361ba085d1a977291 | p@chr1:208712347..208712354, + |
| 1.24e-87 | FFCP PHASE1:Hg19::chr3:12689370..12689373,+#_a9ca77cc551dcea2f34df5bcbbe968e0 | p@chr3:12689370..12689373, + |
| 1.24e-87 | FFCP PHASE2:Hg19::chr3:12689370..12689373,+#_a9ca77cc551dcea2f34df5bcbbe968e0 | p@chr3:12689370..12689373, + |
| 1.83e-87 | FFCP PHASE2:Hg19::chrX:22015219..22015221,+#_7bfe16f15bc01bff90e5b2d4c9eaab18 | p@chrX:22015219..22015221, + |
| 1.83e-87 | FFCP PHASE1:Hg19::chrX:22015219..22015221,+#_7bfe16f15bc01bff90e5b2d4c9eaab18 | p@chrX:22015219..22015221, + |
| 5.17e-82 | FFCP PHASE2:Hg19::chr3:72150292..72150301,+#_2d4294c4f29fa53ceb9433db72206a4b | p@chr3:72150292..72150301, + |
| 5.17e-82 | FFCP PHASE1:Hg19::chr3:72150292..72150301,+#_2d4294c4f29fa53ceb9433db72206a4b | p@chr3:72150292..72150301, + |
| 7.87e-82 | FFCP PHASE2:Hg19::chr19:18613543..18613548,-#_ed4c0b0755733a80ea3817237f680a8b | p@chr19:18613543..18613548, - |
| 7.87e-82 | FFCP PHASE1:Hg19::chr19:18613543..18613548,-#_ed4c0b0755733a80ea3817237f680a8b | p@chr19:18613543..18613548, - |
| 2.25e-81 | FFCP PHASE1:Hg19::chr3:128946643..128946657,-#_34b1983b3cf6e924e2f671613ef2f022 | p@chr3:128946643..128946657, - |
| 2.25e-81 | FFCP PHASE2:Hg19::chr3:128946643..128946657,-#_34b1983b3cf6e924e2f671613ef2f022 | p@chr3:128946643..128946657, - |
| 1.09e-80 | FFCP PHASE2:Hg19::chr1:182367155..182367159,+#_908893f5f1101ae738ff46e33d2b8bd9 | p@chr1:182367155..182367159, + |
| 1.09e-80 | FFCP PHASE1:Hg19::chr1:182367155..182367159,+#_908893f5f1101ae738ff46e33d2b8bd9 | p@chr1:182367155..182367159, + |
| 2.48e-80 | FFCP PHASE2:Hg19::chr2:136971902..136971905,-#_c818dbdb6d30ff26c0b8716815cd1222 | p@chr2:136971902..136971905, - |
| 2.48e-80 | FFCP PHASE1:Hg19::chr2:136971902..136971905,-#_c818dbdb6d30ff26c0b8716815cd1222 | p@chr2:136971902..136971905, - |
| 5.93e-80 | FFCP PHASE1:Hg19::chr15:90574798..90574806,+#_939d1501e479429e21366bd75a71f144 | p@chr15:90574798..90574806, + |
| 5.93e-80 | FFCP PHASE2:Hg19::chr15:90574798..90574806,+#_939d1501e479429e21366bd75a71f144 | p@chr15:90574798..90574806, + |
| 1.26e-76 | FFCP PHASE1:Hg19::chr1:117057737..117057747,-#_95a22658d498f8970c91a2676fe14705 | p@chr1:117057737..117057747, - |
| 1.26e-76 | FFCP PHASE2:Hg19::chr1:117057737..117057747,-#_95a22658d498f8970c91a2676fe14705 | p@chr1:117057737..117057747, - |
| 8.79e-75 | FFCP PHASE2:Hg19::chr17:58247963..58247970,-#_7547f3751f765e08959a674d600eacc8 | p@chr17:58247963..58247970, - |
| 8.79e-75 | FFCP PHASE2:Hg19::chr2:70246087..70246098,-#_7547f3751f765e08959a674d600eacc8 | p@chr2:70246087..70246098, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr11:75484913..75484923,+#_7547f3751f765e08959a674d600eacc8 | p@chr11:75484913..75484923, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr15:69075220..69075232,-#_7547f3751f765e08959a674d600eacc8 | p@chr15:69075220..69075232, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr1:185389832..185389838,-#_7547f3751f765e08959a674d600eacc8 | p@chr1:185389832..185389838, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr11:75482683..75482690,-#_7547f3751f765e08959a674d600eacc8 | p@chr11:75482683..75482690, - |
| 8.79e-75 | FFCP PHASE2:Hg19::chr1:159047469..159047474,+#_7547f3751f765e08959a674d600eacc8 | p@chr1:159047469..159047474, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr21:35570914..35570921,+#_7547f3751f765e08959a674d600eacc8 | p@chr21:35570914..35570921, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr15:80189589..80189598,+#_7547f3751f765e08959a674d600eacc8 | p@chr15:80189589..80189598, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr2:70274580..70274587,-#_7547f3751f765e08959a674d600eacc8 | p@chr2:70274580..70274587, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr20:4792540..4792567,+#_7547f3751f765e08959a674d600eacc8 | p@chr20:4792540..4792567, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr20:48963128..48963163,+#_7547f3751f765e08959a674d600eacc8 | p@chr20:48963128..48963163, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr2:70246087..70246098,-#_7547f3751f765e08959a674d600eacc8 | p@chr2:70246087..70246098, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr1:198610136..198610143,+#_7547f3751f765e08959a674d600eacc8 | p@chr1:198610136..198610143, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr11:75484913..75484923,+#_7547f3751f765e08959a674d600eacc8 | p@chr11:75484913..75484923, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr21:46334376..46334408,+#_7547f3751f765e08959a674d600eacc8 | p@chr21:46334376..46334408, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr15:69075220..69075232,-#_7547f3751f765e08959a674d600eacc8 | p@chr15:69075220..69075232, - |
| 8.79e-75 | FFCP PHASE2:Hg19::chr8:133774445..133774459,+#_7547f3751f765e08959a674d600eacc8 | p@chr8:133774445..133774459, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr21:35570914..35570921,+#_7547f3751f765e08959a674d600eacc8 | p@chr21:35570914..35570921, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr20:4792540..4792567,+#_7547f3751f765e08959a674d600eacc8 | p@chr20:4792540..4792567, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr21:42739014..42739023,+#_7547f3751f765e08959a674d600eacc8 | p@chr21:42739014..42739023, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr21:46334376..46334408,+#_7547f3751f765e08959a674d600eacc8 | p@chr21:46334376..46334408, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr17:58247963..58247970,-#_7547f3751f765e08959a674d600eacc8 | p@chr17:58247963..58247970, - |
| 8.79e-75 | FFCP PHASE2:Hg19::chr11:75482683..75482690,-#_7547f3751f765e08959a674d600eacc8 | p@chr11:75482683..75482690, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr1:159047469..159047474,+#_7547f3751f765e08959a674d600eacc8 | p@chr1:159047469..159047474, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr4:74702740..74702748,-#_7547f3751f765e08959a674d600eacc8 | p@chr4:74702740..74702748, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr20:48963128..48963163,+#_7547f3751f765e08959a674d600eacc8 | p@chr20:48963128..48963163, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr2:70274580..70274587,-#_7547f3751f765e08959a674d600eacc8 | p@chr2:70274580..70274587, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr4:74702740..74702748,-#_7547f3751f765e08959a674d600eacc8 | p@chr4:74702740..74702748, - |
| 8.79e-75 | FFCP PHASE2:Hg19::chr1:198610136..198610143,+#_7547f3751f765e08959a674d600eacc8 | p@chr1:198610136..198610143, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr21:42739014..42739023,+#_7547f3751f765e08959a674d600eacc8 | p@chr21:42739014..42739023, + |
| 8.79e-75 | FFCP PHASE2:Hg19::chr1:185389832..185389838,-#_7547f3751f765e08959a674d600eacc8 | p@chr1:185389832..185389838, - |
| 8.79e-75 | FFCP PHASE1:Hg19::chr8:133774445..133774459,+#_7547f3751f765e08959a674d600eacc8 | p@chr8:133774445..133774459, + |
| 8.79e-75 | FFCP PHASE1:Hg19::chr15:80189589..80189598,+#_7547f3751f765e08959a674d600eacc8 | p@chr15:80189589..80189598, + |
| 1.02e-74 | FFCP PHASE2:Hg19::chr11:1865774..1865782,+#_858baf6b9e25025aebc9cf6a224bdd6f | p@chr11:1865774..1865782, + |
| 1.02e-74 | FFCP PHASE2:Hg19::chr2:103039663..103039672,+#_858baf6b9e25025aebc9cf6a224bdd6f | p6@IL18RAP |
| 1.02e-74 | FFCP PHASE1:Hg19::chr11:1865774..1865782,+#_858baf6b9e25025aebc9cf6a224bdd6f | p@chr11:1865774..1865782, + |
| 1.02e-74 | FFCP PHASE1:Hg19::chr2:103039663..103039672,+#_858baf6b9e25025aebc9cf6a224bdd6f | p6@IL18RAP |
| 3.92e-73 | FFCP PHASE1:Hg19::chr11:15601676..15601684,-#_b5c75b216e5b3be37045d2950ce30a53 | p@chr11:15601676..15601684, - |
| 3.92e-73 | FFCP PHASE2:Hg19::chr11:15601676..15601684,-#_b5c75b216e5b3be37045d2950ce30a53 | p@chr11:15601676..15601684, - |
| 5.95e-72 | FFCP PHASE2:Hg19::chr2:136971977..136971986,-#_630b2234a4d680ded1c363607feba668 | p@chr2:136971977..136971986, - |
| 5.95e-72 | FFCP PHASE1:Hg19::chr2:136971977..136971986,-#_630b2234a4d680ded1c363607feba668 | p@chr2:136971977..136971986, - |
| 6.52e-72 | FFCP PHASE1:Hg19::chr3:129546717..129546727,-#_de90db3dfb77154270d549723b10d037 | p29@TMCC1 |
| 6.52e-72 | FFCP PHASE2:Hg19::chr14:88468930..88468934,-#_de90db3dfb77154270d549723b10d037 | p@chr14:88468930..88468934, - |
