CL:0000071: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000071
|name=blood vessel endothelial cell
|namespace=cell
|def="An endothelial cell that lines the vasculature." [GOC:tfm]
|xref=
|is_a=CL:0000076;;CL:0002...") |
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|id=CL:0000071 | |id=CL:0000071 | ||
|name=blood vessel endothelial cell | |name=blood vessel endothelial cell | ||
|namespace= | |namespace=efo | ||
|def="An endothelial cell that lines the vasculature." [GOC:tfm] | |def="An endothelial cell that lines the vasculature." [GOC:tfm] | ||
|xref= | |xref= | ||
|is_a=CL:0000076;;CL:0002139 | |is_a=CL:0000076;;CL:0000115;;CL:0002139 | ||
|synonym=" | |synonym="cuboidal endothelial cell of vascular tree" EXACT [] | ||
|comment= | |comment= | ||
|alt_id= | |alt_id= | ||
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|located_in= | |located_in= | ||
|part_of=UBERON:0004638 | |part_of=UBERON:0004638 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:36, 15 June 2012
| Name: | blood vessel endothelial cell |
|---|---|
| Namespace: | efo |
| Definition: | "An endothelial cell that lines the vasculature." [GOC:tfm] |
| Synonyms: | "cuboidal endothelial cell of vascular tree" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000076(squamous epithelial cell),CL:0000115(endothelial cell),CL:0002139(endothelial cell of vascular tree) |
|---|---|
| develops_from: | CL:0002546(embryonic blood vessel endothelial progenitor cell) |
| part_of: | UBERON:0004638(blood vessel endothelium) |
Children
| is a: | CL:0002144 (capillary endothelial cell),CL:0002543 (vein endothelial cell),CL:0002585 (retinal blood vessel endothelial cell),CL:1000413 (endothelial cell of artery) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
... further results Mouse (Mus musculus)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000071 (blood vessel endothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.63e-150 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_6d2efac66bbfc1c7f66b0c10e4572037 | p@chr18:33046982..33046991, - |
| 8.63e-150 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_6d2efac66bbfc1c7f66b0c10e4572037 | p@chr18:33046982..33046991, - |
| 2.4e-126 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_162f0ae0ba1aec5479aadd12fe457c34 | p1@MIR216A |
| 2.4e-126 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_162f0ae0ba1aec5479aadd12fe457c34 | p1@MIR216A |
| 1.75e-121 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_7bd582bd865256534ef9b1ef353f3fe7 | p@chr6:78171774..78171792, + |
| 1.75e-121 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_7bd582bd865256534ef9b1ef353f3fe7 | p@chr6:78171774..78171792, + |
| 2.8e-121 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_da6a17bc6c4c71a13c5e34128738e6fc | p@chr18:33047157..33047168, - |
| 2.8e-121 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_da6a17bc6c4c71a13c5e34128738e6fc | p@chr18:33047157..33047168, - |
| 2.32e-119 | FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_d5a31338f8d8f9bc6d839513223e2d40 | p12@PARP12 |
| 2.32e-119 | FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_d5a31338f8d8f9bc6d839513223e2d40 | p12@PARP12 |
| 3.95e-117 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_0ca147c4b26eab9f822b3cf3e362f767 | p5@PARP12 |
| 3.95e-117 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_0ca147c4b26eab9f822b3cf3e362f767 | p5@PARP12 |
| 1.12e-116 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_9ae54b9bb3659e11c95f487912b22829 | p12@KSR2 |
| 1.12e-116 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_9ae54b9bb3659e11c95f487912b22829 | p12@KSR2 |
| 4.37e-116 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_cb4aae0d15feed33ccebbe58e0dc170b | p@chr3:43538305..43538325, - |
| 4.37e-116 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_cb4aae0d15feed33ccebbe58e0dc170b | p@chr3:43538305..43538325, - |
| 6.53e-113 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_aa74e44687f810f20fd314b1ebfddc09 | p@chrX:71299684..71299699, + |
| 6.53e-113 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_aa74e44687f810f20fd314b1ebfddc09 | p@chrX:71299684..71299699, + |
| 2.12e-108 | FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_3e3f8faf0d737e12785ebf3eee409ea5 | p7@WDFY4 |
| 2.12e-108 | FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_3e3f8faf0d737e12785ebf3eee409ea5 | p7@WDFY4 |
| 3.85e-107 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_7503f04ad3ec3bd6a9b6daaf1dcef015 | p6@WDFY4 |
| 3.85e-107 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_7503f04ad3ec3bd6a9b6daaf1dcef015 | p6@WDFY4 |
| 3.44e-106 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_3e849a0cf9649c734c337b899e2bbae9 | p2@BMX |
| 3.44e-106 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_3e849a0cf9649c734c337b899e2bbae9 | p2@BMX |
| 1.68e-105 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_3f2cffc2c08f995da0bd54c8f3db5130 | p@chr6:3753188..3753192, - |
| 1.68e-105 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_3f2cffc2c08f995da0bd54c8f3db5130 | p@chr6:3753188..3753192, - |
| 3.71e-103 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_7d36fc031497365b3b6256661114ec60 | p1@ENST00000513158 |
| 3.71e-103 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_7d36fc031497365b3b6256661114ec60 | p1@ENST00000513158 |
| 8.1e-103 | FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_50ee722ba7fb7341a76dd16c62528f6d | p@chr10:99655692..99655725, - |
| 8.1e-103 | FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_50ee722ba7fb7341a76dd16c62528f6d | p@chr10:99655692..99655725, - |
| 1.53e-102 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_9408072dfe54e210e1616f04ef31f48b | p8@GIMAP6 |
| 1.53e-102 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_9408072dfe54e210e1616f04ef31f48b | p8@GIMAP6 |
| 3.68e-102 | FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_5795ab483640f745f6d9606dbe7301ef | p4@EIF2B2 |
| 3.68e-102 | FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_5795ab483640f745f6d9606dbe7301ef | p4@EIF2B2 |
| 4.84e-102 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_3ed48220f8b46acf8b92bb4508922af4 | p@chr6:78171746..78171769, + |
| 4.84e-102 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_3ed48220f8b46acf8b92bb4508922af4 | p@chr6:78171746..78171769, + |
| 2.83e-101 | FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_e286e4702104e82ade53b6e50f6cd72d | p@chr6:148664333..148664338, - |
| 2.83e-101 | FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_e286e4702104e82ade53b6e50f6cd72d | p@chr6:148664333..148664338, - |
| 1.76e-99 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_aeeda3af0639c54b8e8265cf011156f8 | p5@CLEC14A |
| 1.76e-99 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_aeeda3af0639c54b8e8265cf011156f8 | p5@CLEC14A |
| 5.12e-99 | FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_574eee021b25b8d82a4699ac20338ee8 | p15@RAI14 |
| 5.12e-99 | FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_574eee021b25b8d82a4699ac20338ee8 | p15@RAI14 |
| 3.9e-98 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_1dce2d42397e1bf325b1023adfa5637f | p5@ICAM2 |
| 3.9e-98 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_1dce2d42397e1bf325b1023adfa5637f | p5@ICAM2 |
| 1.28e-97 | FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_f8cdde05186ced59b04d3d3f9ba81cb6 | p15@HHIP |
| 1.28e-97 | FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_f8cdde05186ced59b04d3d3f9ba81cb6 | p15@HHIP |
| 1.51e-97 | FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_cbd0b0cbea50fed6e1fa37a6728cdf9d | p@chr9:139563124..139563129, + |
| 1.51e-97 | FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_cbd0b0cbea50fed6e1fa37a6728cdf9d | p@chr9:139563124..139563129, + |
| 5.66e-97 | FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_b744070fcd742db8d21fb1b97b0aee23 | p10@NOS3 |
| 5.66e-97 | FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_b744070fcd742db8d21fb1b97b0aee23 | p10@NOS3 |
| 1.44e-96 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_9fdff4ec7dc5f8238e8b47ddc8e11b50 | p11@UIMC1 |
| 1.44e-96 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_9fdff4ec7dc5f8238e8b47ddc8e11b50 | p11@UIMC1 |
| 3.94e-95 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_0bd7c2c783d112542dd3071e9e949609 | p6@CLEC14A |
| 3.94e-95 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_0bd7c2c783d112542dd3071e9e949609 | p6@CLEC14A |
| 4.62e-95 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_b35612ad4d5378db2df7b4636554c124 | p@chr11:124761247..124761258, - |
| 4.62e-95 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_b35612ad4d5378db2df7b4636554c124 | p@chr11:124761247..124761258, - |
| 6.81e-95 | FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_bafe873ee91ae38e526d6fdd998bcdfe | p@chr1:22264210..22264241, + |
| 6.81e-95 | FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_bafe873ee91ae38e526d6fdd998bcdfe | p@chr1:22264210..22264241, + |
| 5.14e-93 | FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_23f88042d3cd82c06a0e196a58eb2487 | p@chr9:139543445..139543462, + |
| 5.14e-93 | FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_23f88042d3cd82c06a0e196a58eb2487 | p@chr9:139543445..139543462, + |
| 3.62e-92 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_a5c77a4885b971d51deea696b8a04109 | p@chr13:32835894..32835907, + |
| 3.62e-92 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_a5c77a4885b971d51deea696b8a04109 | p@chr13:32835894..32835907, + |
| 6.53e-92 | FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_08ad12e872701393a12f002c4377ab7c | p@chr9:139541134..139541139, + |
| 6.53e-92 | FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_08ad12e872701393a12f002c4377ab7c | p@chr9:139541134..139541139, + |
| 8.31e-92 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_1ac4540cefd5d2fff525f5f5ddaffe27 | p@chr12:105863705..105863718, + |
| 8.31e-92 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_1ac4540cefd5d2fff525f5f5ddaffe27 | p@chr12:105863705..105863718, + |
| 1.78e-91 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_e4676288f54387e0b348f580176f1028 | p@chr19:41985048..41985050, - |
| 1.78e-91 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_e4676288f54387e0b348f580176f1028 | p@chr19:41985048..41985050, - |
| 1.27e-90 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_2036e31e031c7d8b7110378928a6deea | p@chr12:105863636..105863650, + |
| 1.27e-90 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_2036e31e031c7d8b7110378928a6deea | p@chr12:105863636..105863650, + |
| 4.84e-90 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_49778197a22d4a923b02bebe85b1be85 | p@chr16:2220383..2220402, + |
| 4.84e-90 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_49778197a22d4a923b02bebe85b1be85 | p@chr16:2220383..2220402, + |
| 4.93e-90 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_47e9726f8122c3c396b44d42acf09a0a | p@chr9:139543390..139543404, + |
| 4.93e-90 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_47e9726f8122c3c396b44d42acf09a0a | p@chr9:139543390..139543404, + |
| 2.05e-88 | FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_6cdd50ae9be575406f410ac4d7e3b66e | p14@PTPRE |
| 2.05e-88 | FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_6cdd50ae9be575406f410ac4d7e3b66e | p14@PTPRE |
| 2.37e-88 | FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_f234a8b017179bcbc1c06c41f09273f5 | p@chr13:32835912..32835936, + |
| 2.37e-88 | FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_f234a8b017179bcbc1c06c41f09273f5 | p@chr13:32835912..32835936, + |
| 3.48e-88 | FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_25a985b4a9cb0e9981cfe163d5a34815 | p@chr6:11607864..11607875, + |
| 3.48e-88 | FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_25a985b4a9cb0e9981cfe163d5a34815 | p@chr6:11607864..11607875, + |
| 8.3e-88 | FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_b16c77146944e02714268188a9b24cd9 | p1@ENST00000418525 |
| 8.3e-88 | FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_b16c77146944e02714268188a9b24cd9 | p1@ENST00000418525 |
| 1.93e-87 | FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_d1fcdaf1bb63eed19ababb0ea33074a6 | p@chr12:96830523..96830532, + |
| 1.93e-87 | FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_d1fcdaf1bb63eed19ababb0ea33074a6 | p@chr12:96830523..96830532, + |
| 3.38e-87 | FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_3016861302187b4f66f0a7a85a9316d6 | p11@MANSC1 |
| 3.38e-87 | FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_3016861302187b4f66f0a7a85a9316d6 | p11@MANSC1 |
| 3.45e-85 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_48e8d09fe0c2fc9cdf692b45032e0f73 | p@chr18:33047117..33047138, - |
| 3.45e-85 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_48e8d09fe0c2fc9cdf692b45032e0f73 | p@chr18:33047117..33047138, - |
| 4.2e-85 | FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_7bcd9edccec8c78a53362bf60ccbaaaa | p@chr18:33047076..33047099, - |
| 4.2e-85 | FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_7bcd9edccec8c78a53362bf60ccbaaaa | p@chr18:33047076..33047099, - |
| 1.18e-84 | FFCP PHASE2:Hg19::chr1:28785607..28785624,+#_edbf9169b5ea1212a96b82d4ab171855 | p@chr1:28785607..28785624, + |
| 1.18e-84 | FFCP PHASE1:Hg19::chr1:28785607..28785624,+#_edbf9169b5ea1212a96b82d4ab171855 | p@chr1:28785607..28785624, + |
| 1.82e-84 | FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_19874f889529326c41aa2632f151b292 | p@chr3:58034268..58034295, + |
| 1.82e-84 | FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_19874f889529326c41aa2632f151b292 | p@chr3:58034268..58034295, + |
| 3.24e-84 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_216cee1e098413408f158604cbd885c9 | p@chr15:39423060..39423066, + |
| 3.24e-84 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_216cee1e098413408f158604cbd885c9 | p@chr15:39423060..39423066, + |
| 1.28e-80 | FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_ae1d94b59f6ce1d3cbce7e0c2ae97908 | p4@FAM124B |
| 1.28e-80 | FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_ae1d94b59f6ce1d3cbce7e0c2ae97908 | p4@FAM124B |
| 3.03e-80 | FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_92b85480e2b148ee4e965346a868a53e | p4@ABI3 |
| 3.03e-80 | FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_92b85480e2b148ee4e965346a868a53e | p4@ABI3 |
