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Revision as of 17:25, 15 June 2012

Name:head or neck bone
Xrefs:
links:
MA:0000569

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001474(bone element)
part_of:UBERON:0007811(craniocervical region)



Children

is a:UBERON:0003457 (head bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007914 (head or neck bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81bp14@C17orf67
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81bp14@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6p11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6p11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6p13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6p13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6p@chr8:57353655..57353662, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_c7b014f591b3f452f653d0547dd682dfp3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_c7b014f591b3f452f653d0547dd682dfp41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_c7b014f591b3f452f653d0547dd682dfp2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_c7b014f591b3f452f653d0547dd682dfp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_c7b014f591b3f452f653d0547dd682dfp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c7b014f591b3f452f653d0547dd682dfp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_c7b014f591b3f452f653d0547dd682dfp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_c7b014f591b3f452f653d0547dd682dfp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_c7b014f591b3f452f653d0547dd682dfp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_c7b014f591b3f452f653d0547dd682dfp2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_c7b014f591b3f452f653d0547dd682dfp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c7b014f591b3f452f653d0547dd682dfp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_c7b014f591b3f452f653d0547dd682dfp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_c7b014f591b3f452f653d0547dd682dfp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c7b014f591b3f452f653d0547dd682dfp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_c7b014f591b3f452f653d0547dd682dfp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_c7b014f591b3f452f653d0547dd682dfp1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_c7b014f591b3f452f653d0547dd682dfp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_c7b014f591b3f452f653d0547dd682dfp2@Strc
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_c7b014f591b3f452f653d0547dd682dfp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_c7b014f591b3f452f653d0547dd682dfp4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_c7b014f591b3f452f653d0547dd682dfp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_c7b014f591b3f452f653d0547dd682dfp9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_c7b014f591b3f452f653d0547dd682dfp3@Tecta
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_c7b014f591b3f452f653d0547dd682dfp7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_c7b014f591b3f452f653d0547dd682dfp@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_c7b014f591b3f452f653d0547dd682dfp3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_c7b014f591b3f452f653d0547dd682dfp1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_c7b014f591b3f452f653d0547dd682dfp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_c7b014f591b3f452f653d0547dd682dfp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_c7b014f591b3f452f653d0547dd682dfp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_c7b014f591b3f452f653d0547dd682dfp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_c7b014f591b3f452f653d0547dd682dfp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_c7b014f591b3f452f653d0547dd682dfp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_c7b014f591b3f452f653d0547dd682dfp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_c7b014f591b3f452f653d0547dd682dfp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_c7b014f591b3f452f653d0547dd682dfp6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_c7b014f591b3f452f653d0547dd682dfp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_c7b014f591b3f452f653d0547dd682dfp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_c7b014f591b3f452f653d0547dd682dfp1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_c7b014f591b3f452f653d0547dd682dfp2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_c7b014f591b3f452f653d0547dd682dfp18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_c7b014f591b3f452f653d0547dd682dfp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c7b014f591b3f452f653d0547dd682dfp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c7b014f591b3f452f653d0547dd682dfp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_c7b014f591b3f452f653d0547dd682dfp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_c7b014f591b3f452f653d0547dd682dfp@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_c7b014f591b3f452f653d0547dd682dfp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_c7b014f591b3f452f653d0547dd682dfp2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_c7b014f591b3f452f653d0547dd682dfp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_c7b014f591b3f452f653d0547dd682dfp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_c7b014f591b3f452f653d0547dd682dfp2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_c7b014f591b3f452f653d0547dd682dfp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_c7b014f591b3f452f653d0547dd682dfp1@Tecta
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_c7b014f591b3f452f653d0547dd682dfp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_c7b014f591b3f452f653d0547dd682dfp3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c7b014f591b3f452f653d0547dd682dfp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_c7b014f591b3f452f653d0547dd682dfp3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_c7b014f591b3f452f653d0547dd682dfp@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_c7b014f591b3f452f653d0547dd682dfp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_c7b014f591b3f452f653d0547dd682dfp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_c7b014f591b3f452f653d0547dd682dfp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_c7b014f591b3f452f653d0547dd682dfp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:89215333..89215341, +

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