Personal tools

UBERON:0005602: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0005602 |name=dorsal mesogastrium |namespace= |def="The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesen...")
 
No edit summary
Line 21: Line 21:
|part_of=UBERON:0002296;;UBERON:0003281
|part_of=UBERON:0002296;;UBERON:0003281
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:23, 15 June 2012

Name:dorsal mesogastrium
Definition:"The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesentery (or dorsal mesogastrium, when referring to the portion at the stomach), and the part which suspends the colon is termed the mesocolon. The dorsal mesogastrium develops into the greater omentum." [Wikipedia:Dorsal_mesentery]
Xrefs:
links:

EHDAA:3001
EHDAA2:0000416
EMAPA:17025
EMAPA:18903
MA:0001618
ncithesaurus:Dorsal_Mesogastrium

VHOG:0000352
Synonyms: "dorsal mesentery" RELATED [Wikipedia:Dorsal_mesentery]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003281(mesentery of stomach)
part_of:UBERON:0002296(dorsal mesentery),UBERON:0003281(mesentery of stomach)



Children

part of:UBERON:0006293 (spleen primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005602 (dorsal mesogastrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000524012
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp7@GDPD2
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp8@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp17@AP2A2
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@uc003pyn.1
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp5@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp7@CD5L
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_b88feb951d5f7dc8bd09fa1d37c6e18bp60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_b88feb951d5f7dc8bd09fa1d37c6e18bp17@AP2A2
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_cf5a095db48f8656dd92eea019df0777p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_cf5a095db48f8656dd92eea019df0777p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_cf5a095db48f8656dd92eea019df0777p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_cf5a095db48f8656dd92eea019df0777p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_cf5a095db48f8656dd92eea019df0777p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_cf5a095db48f8656dd92eea019df0777p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_cf5a095db48f8656dd92eea019df0777p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_cf5a095db48f8656dd92eea019df0777p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_cf5a095db48f8656dd92eea019df0777p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_cf5a095db48f8656dd92eea019df0777p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_cf5a095db48f8656dd92eea019df0777p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_cf5a095db48f8656dd92eea019df0777p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_cf5a095db48f8656dd92eea019df0777p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_cf5a095db48f8656dd92eea019df0777p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_cf5a095db48f8656dd92eea019df0777p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_cf5a095db48f8656dd92eea019df0777p@chr11:56859722..56859732, -
9.74e-88FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_b1617ecf02d4cbdc7bc8d994c516da70p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_b1617ecf02d4cbdc7bc8d994c516da70p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_b1617ecf02d4cbdc7bc8d994c516da70p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_b1617ecf02d4cbdc7bc8d994c516da70p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_b1617ecf02d4cbdc7bc8d994c516da70p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE2:Hg19::chr16:70680361..70680370,+#_b1617ecf02d4cbdc7bc8d994c516da70p6@IL34
9.74e-88FFCP PHASE1:Hg19::chr12:72481040..72481051,+#_b1617ecf02d4cbdc7bc8d994c516da70p19@TRHDE
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_b1617ecf02d4cbdc7bc8d994c516da70p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_b1617ecf02d4cbdc7bc8d994c516da70p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_b1617ecf02d4cbdc7bc8d994c516da70p19@TRHDE

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0005602&oldid=1833238"