UBERON:0005153: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0005153
|name=epithelial bud
|namespace=
|def="A bud is a protrusion that forms from an epithelial sheet by localized folding." [GO:0060572]
|xref=
|...") |
No edit summary |
||
| Line 21: | Line 21: | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:21, 15 June 2012
| Name: | epithelial bud |
|---|---|
| Definition: | "A bud is a protrusion that forms from an epithelial sheet by localized folding." [GO:0060572] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005157(epithelial fold) |
|---|
Children
| is a: | UBERON:0000118 (lung bud),UBERON:0003820 (prostate bud),UBERON:0005333 (mammary bud) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005153 (epithelial bud), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.21e-66 | FFCP PHASE2:Mm9::chr11:85703335..85703350,+#_6287ee896b6b9305c45a314e795dd1c1 | p4@Tbx4 |
| 1.21e-66 | FFCP PHASE1:Mm9::chr11:85703335..85703350,+#_6287ee896b6b9305c45a314e795dd1c1 | p4@Tbx4 |
| 1.06e-62 | FFCP PHASE2:Mm9::chr11:85589157..85589190,-#_5142d203a5d91fe2c979aa38a5359db1 | p1@ENSMUST00000134305 |
| 1.06e-62 | FFCP PHASE1:Mm9::chr11:85589157..85589190,-#_5142d203a5d91fe2c979aa38a5359db1 | p1@ENSMUST00000134305 |
| 1.52e-61 | FFCP PHASE1:Mm9::chr11:85533239..85533252,-#_f8aab53f810b2a74a05ecd516dc631c5 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
| 1.52e-61 | FFCP PHASE2:Mm9::chr11:85533239..85533252,-#_f8aab53f810b2a74a05ecd516dc631c5 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
| 1.91e-61 | FFCP PHASE1:Mm9::chr11:85699562..85699575,+#_ab68af0688db03d042cf179990ba7972 | p6@Tbx4 |
| 1.91e-61 | FFCP PHASE2:Mm9::chr11:85699562..85699575,+#_ab68af0688db03d042cf179990ba7972 | p6@Tbx4 |
| 5.56e-61 | FFCP PHASE2:Mm9::chr11:59457994..59457997,-#_8aef9c521183748ab76034caad94255a | p@chr11:59457994..59457997, - |
| 5.56e-61 | FFCP PHASE1:Mm9::chr4:138812977..138812992,+#_8aef9c521183748ab76034caad94255a | p@chr4:138812977..138812992, + |
| 5.56e-61 | FFCP PHASE1:Mm9::chr12:57636003..57636017,-#_8aef9c521183748ab76034caad94255a | p@chr12:57636003..57636017, - |
| 5.56e-61 | FFCP PHASE2:Mm9::chr12:57598716..57598720,-#_8aef9c521183748ab76034caad94255a | p@chr12:57598716..57598720, - |
| 5.56e-61 | FFCP PHASE1:Mm9::chr8:94878479..94878503,-#_8aef9c521183748ab76034caad94255a | p@chr8:94878479..94878503, - |
| 5.56e-61 | FFCP PHASE2:Mm9::chr12:57636003..57636017,-#_8aef9c521183748ab76034caad94255a | p@chr12:57636003..57636017, - |
| 5.56e-61 | FFCP PHASE1:Mm9::chr12:57598716..57598720,-#_8aef9c521183748ab76034caad94255a | p@chr12:57598716..57598720, - |
| 5.56e-61 | FFCP PHASE2:Mm9::chr8:94878479..94878503,-#_8aef9c521183748ab76034caad94255a | p@chr8:94878479..94878503, - |
| 5.56e-61 | FFCP PHASE2:Mm9::chr4:138812977..138812992,+#_8aef9c521183748ab76034caad94255a | p@chr4:138812977..138812992, + |
| 5.56e-61 | FFCP PHASE1:Mm9::chr11:59457994..59457997,-#_8aef9c521183748ab76034caad94255a | p@chr11:59457994..59457997, - |
| 1.23e-57 | FFCP PHASE1:Mm9::chr12:57637649..57637665,-#_4fbbfebe3004abd31e2b7ecf855a9010 | p8@Nkx2-1 |
| 1.23e-57 | FFCP PHASE2:Mm9::chr12:57637649..57637665,-#_4fbbfebe3004abd31e2b7ecf855a9010 | p8@Nkx2-1 |
| 1.37e-57 | FFCP PHASE2:Mm9::chr12:57630487..57630498,-#_578a7b75a63ffe333ae754f4d693dccc | p2@E030019B13Rik |
| 1.37e-57 | FFCP PHASE1:Mm9::chr12:57630487..57630498,-#_578a7b75a63ffe333ae754f4d693dccc | p2@E030019B13Rik |
| 1.53e-57 | FFCP PHASE1:Mm9::chr2:17653019..17653038,-#_afabe12aa4652523f0f39baefd4232cf | p10@Nebl |
| 1.53e-57 | FFCP PHASE2:Mm9::chr2:17653019..17653038,-#_afabe12aa4652523f0f39baefd4232cf | p10@Nebl |
| 1.7e-57 | FFCP PHASE1:Mm9::chr12:57637700..57637717,-#_7bb938d53691e4c05c7d68a0cdcdb0ed | p9@Nkx2-1 |
| 1.7e-57 | FFCP PHASE2:Mm9::chr12:57637700..57637717,-#_7bb938d53691e4c05c7d68a0cdcdb0ed | p9@Nkx2-1 |
| 1.79e-56 | FFCP PHASE1:Mm9::chr19:18833097..18833135,+#_c99f17d2049857025d268bc413c48185 | p3@Trpm6 |
| 1.79e-56 | FFCP PHASE2:Mm9::chr19:18833097..18833135,+#_c99f17d2049857025d268bc413c48185 | p3@Trpm6 |
| 1.79e-56 | FFCP PHASE2:Mm9::chr12:57598537..57598547,-#_c99f17d2049857025d268bc413c48185 | p@chr12:57598537..57598547, - |
| 1.79e-56 | FFCP PHASE1:Mm9::chr12:57598537..57598547,-#_c99f17d2049857025d268bc413c48185 | p@chr12:57598537..57598547, - |
| 1.79e-56 | FFCP PHASE2:Mm9::chr12:57630364..57630373,-#_c99f17d2049857025d268bc413c48185 | p3@E030019B13Rik |
| 1.79e-56 | FFCP PHASE1:Mm9::chr12:57630364..57630373,-#_c99f17d2049857025d268bc413c48185 | p3@E030019B13Rik |
| 2.01e-56 | FFCP PHASE1:Mm9::chr14:115241755..115241762,-#_3688f5ab048a8c4b987aff34edc721d1 | p@chr14:115241755..115241762, - |
| 2.01e-56 | FFCP PHASE2:Mm9::chr14:115241755..115241762,-#_3688f5ab048a8c4b987aff34edc721d1 | p@chr14:115241755..115241762, - |
| 2.24e-56 | FFCP PHASE2:Mm9::chr4:138812999..138813015,+#_aa1912b64db7b4ef7f74819af4b437b2 | p@chr4:138812999..138813015, + |
| 2.24e-56 | FFCP PHASE1:Mm9::chr4:138812999..138813015,+#_aa1912b64db7b4ef7f74819af4b437b2 | p@chr4:138812999..138813015, + |
| 6.2e-56 | FFCP PHASE2:Mm9::chr6:72255924..72255936,+#_99593e1a0f2d874a0f8da25e7abb34d8 | p4@Sftpb |
| 6.2e-56 | FFCP PHASE2:Mm9::chr14:70921265..70921285,-#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr14:70921265..70921285, - |
| 6.2e-56 | FFCP PHASE2:Mm9::chr6:72256828..72256859,+#_99593e1a0f2d874a0f8da25e7abb34d8 | p3@Sftpb |
| 6.2e-56 | FFCP PHASE1:Mm9::chr6:72256828..72256859,+#_99593e1a0f2d874a0f8da25e7abb34d8 | p3@Sftpb |
| 6.2e-56 | FFCP PHASE1:Mm9::chr6:72255924..72255936,+#_99593e1a0f2d874a0f8da25e7abb34d8 | p4@Sftpb |
| 6.2e-56 | FFCP PHASE2:Mm9::chr1:184610062..184610074,+#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr1:184610062..184610074, + |
| 6.2e-56 | FFCP PHASE1:Mm9::chr14:70922576..70922589,-#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr14:70922576..70922589, - |
| 6.2e-56 | FFCP PHASE1:Mm9::chr1:184610062..184610074,+#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr1:184610062..184610074, + |
| 6.2e-56 | FFCP PHASE1:Mm9::chr14:70921265..70921285,-#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr14:70921265..70921285, - |
| 6.2e-56 | FFCP PHASE2:Mm9::chr2:66524237..66524246,-#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr2:66524237..66524246, - |
| 6.2e-56 | FFCP PHASE2:Mm9::chr14:70922576..70922589,-#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr14:70922576..70922589, - |
| 6.2e-56 | FFCP PHASE1:Mm9::chr2:66524237..66524246,-#_99593e1a0f2d874a0f8da25e7abb34d8 | p@chr2:66524237..66524246, - |
| 9.42e-56 | FFCP PHASE1:Mm9::chr5:120282691..120282701,+#_33718f660f72db084a0b20443c297050 | p@chr5:120282691..120282701, + |
| 9.42e-56 | FFCP PHASE2:Mm9::chr5:120282691..120282701,+#_33718f660f72db084a0b20443c297050 | p@chr5:120282691..120282701, + |
| 3.97e-54 | FFCP PHASE2:Mm9::chr12:57630443..57630450,-#_6a391edbeaca28dfc3ca6e9cb6c98426 | p4@E030019B13Rik |
| 3.97e-54 | FFCP PHASE1:Mm9::chr12:57630443..57630450,-#_6a391edbeaca28dfc3ca6e9cb6c98426 | p4@E030019B13Rik |
| 1.46e-52 | FFCP PHASE1:Mm9::chr12:57623172..57623185,-#_09eaa2db067e800e8f6587ccf2920e5e | p@chr12:57623172..57623185, - |
| 1.46e-52 | FFCP PHASE1:Mm9::chr14:70922007..70922052,+#_09eaa2db067e800e8f6587ccf2920e5e | p@chr14:70922007..70922052, + |
| 1.46e-52 | FFCP PHASE2:Mm9::chr14:70922007..70922052,+#_09eaa2db067e800e8f6587ccf2920e5e | p@chr14:70922007..70922052, + |
| 1.46e-52 | FFCP PHASE2:Mm9::chr12:57623172..57623185,-#_09eaa2db067e800e8f6587ccf2920e5e | p@chr12:57623172..57623185, - |
| 1.62e-52 | FFCP PHASE2:Mm9::chr5:28785436..28785450,-#_c53ba1463524ee193a058c15154b1a8b | p@chr5:28785436..28785450, - |
| 1.62e-52 | FFCP PHASE1:Mm9::chr5:28785436..28785450,-#_c53ba1463524ee193a058c15154b1a8b | p@chr5:28785436..28785450, - |
| 1.8e-52 | FFCP PHASE2:Mm9::chr14:70922459..70922482,-#_b92f823018b6d6abd2fda53ce566a401 | p@chr14:70922459..70922482, - |
| 1.8e-52 | FFCP PHASE1:Mm9::chr14:70922459..70922482,-#_b92f823018b6d6abd2fda53ce566a401 | p@chr14:70922459..70922482, - |
| 5.65e-52 | FFCP PHASE1:Mm9::chr16:22439804..22439806,-#_eff409930c65632df03468c048f81b09 | p4@Etv5 |
| 5.65e-52 | FFCP PHASE2:Mm9::chr16:22439804..22439806,-#_eff409930c65632df03468c048f81b09 | p4@Etv5 |
| 1.97e-51 | FFCP PHASE2:Mm9::chr16:19706386..19706390,-#_d3f0d8fed98eae36380aa224746b2485 | p4@Lamp3 |
| 1.97e-51 | FFCP PHASE1:Mm9::chr14:70922486..70922510,-#_d3f0d8fed98eae36380aa224746b2485 | p@chr14:70922486..70922510, - |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72259797..72259814,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72259797..72259814, + |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72264890..72264911,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72264890..72264911, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72259797..72259814,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72259797..72259814, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72264890..72264911,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72264890..72264911, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr14:70923240..70923251,-#_d3f0d8fed98eae36380aa224746b2485 | p@chr14:70923240..70923251, - |
| 1.97e-51 | FFCP PHASE2:Mm9::chr12:57376690..57376716,-#_d3f0d8fed98eae36380aa224746b2485 | p@chr12:57376690..57376716, - |
| 1.97e-51 | FFCP PHASE1:Mm9::chr16:19706386..19706390,-#_d3f0d8fed98eae36380aa224746b2485 | p4@Lamp3 |
| 1.97e-51 | FFCP PHASE2:Mm9::chr14:70922486..70922510,-#_d3f0d8fed98eae36380aa224746b2485 | p@chr14:70922486..70922510, - |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72263977..72263993,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72263977..72263993, + |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72264418..72264441,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72264418..72264441, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72264418..72264441,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72264418..72264441, + |
| 1.97e-51 | FFCP PHASE1:Mm9::chr12:57376690..57376716,-#_d3f0d8fed98eae36380aa224746b2485 | p@chr12:57376690..57376716, - |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72263977..72263993,+#_d3f0d8fed98eae36380aa224746b2485 | p@chr6:72263977..72263993, + |
| 1.97e-51 | FFCP PHASE1:Mm9::chr14:70923240..70923251,-#_d3f0d8fed98eae36380aa224746b2485 | p@chr14:70923240..70923251, - |
| 2.21e-51 | FFCP PHASE1:Mm9::chr6:72264609..72264653,-#_17eae6d5b0999701f37aa9a3c08286dc | p@chr6:72264609..72264653, - |
| 2.21e-51 | FFCP PHASE2:Mm9::chr6:72264609..72264653,-#_17eae6d5b0999701f37aa9a3c08286dc | p@chr6:72264609..72264653, - |
| 2.47e-51 | FFCP PHASE2:Mm9::chr6:129378567..129378573,-#_01bc8eaf1fcc5e6db51459c64e60d799 | p@chr6:129378567..129378573, - |
| 2.47e-51 | FFCP PHASE1:Mm9::chr6:129378567..129378573,-#_01bc8eaf1fcc5e6db51459c64e60d799 | p@chr6:129378567..129378573, - |
| 3.74e-51 | FFCP PHASE2:Mm9::chr3:122432836..122432847,+#_753728d01f8d7b117679f7d29b4a8350 | p16@Pde5a |
| 3.74e-51 | FFCP PHASE1:Mm9::chr3:122432836..122432847,+#_753728d01f8d7b117679f7d29b4a8350 | p16@Pde5a |
| 5.44e-51 | FFCP PHASE2:Mm9::chr12:57637595..57637608,-#_1fcecf12249d0feb830874bce807e828 | p7@Nkx2-1 |
| 5.44e-51 | FFCP PHASE1:Mm9::chr12:57637595..57637608,-#_1fcecf12249d0feb830874bce807e828 | p7@Nkx2-1 |
| 6.54e-51 | FFCP PHASE2:Mm9::chr12:57630433..57630438,-#_39dad7f36b17f30b03978913858348cf | p6@E030019B13Rik |
| 6.54e-51 | FFCP PHASE2:Mm9::chr6:72259749..72259765,+#_39dad7f36b17f30b03978913858348cf | p@chr6:72259749..72259765, + |
| 6.54e-51 | FFCP PHASE1:Mm9::chr9:14522825..14522837,-#_39dad7f36b17f30b03978913858348cf | p3@Piwil4 |
| 6.54e-51 | FFCP PHASE2:Mm9::chr2:152591095..152591110,-#_39dad7f36b17f30b03978913858348cf | p@chr2:152591095..152591110, - |
| 6.54e-51 | FFCP PHASE1:Mm9::chr12:57630433..57630438,-#_39dad7f36b17f30b03978913858348cf | p6@E030019B13Rik |
| 6.54e-51 | FFCP PHASE1:Mm9::chr17:67043399..67043410,-#_39dad7f36b17f30b03978913858348cf | p9@Ptprm |
| 6.54e-51 | FFCP PHASE1:Mm9::chr2:152591095..152591110,-#_39dad7f36b17f30b03978913858348cf | p@chr2:152591095..152591110, - |
| 6.54e-51 | FFCP PHASE2:Mm9::chr14:70931508..70931519,+#_39dad7f36b17f30b03978913858348cf | p@chr14:70931508..70931519, + |
| 6.54e-51 | FFCP PHASE1:Mm9::chr14:41949922..41949935,+#_39dad7f36b17f30b03978913858348cf | p@chr14:41949922..41949935, + |
| 6.54e-51 | FFCP PHASE2:Mm9::chr9:14522825..14522837,-#_39dad7f36b17f30b03978913858348cf | p3@Piwil4 |
| 6.54e-51 | FFCP PHASE1:Mm9::chr2:126950686..126950702,-#_39dad7f36b17f30b03978913858348cf | p@chr2:126950686..126950702, - |
| 6.54e-51 | FFCP PHASE2:Mm9::chr16:19673260..19673277,-#_39dad7f36b17f30b03978913858348cf | p@chr16:19673260..19673277, - |
| 6.54e-51 | FFCP PHASE1:Mm9::chr6:72260761..72260774,-#_39dad7f36b17f30b03978913858348cf | p@chr6:72260761..72260774, - |
| 6.54e-51 | FFCP PHASE1:Mm9::chr14:41949964..41949979,+#_39dad7f36b17f30b03978913858348cf | p@chr14:41949964..41949979, + |
