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Revision as of 17:12, 15 June 2012

Name:temporal bone
Definition:"The temporal bones are situated at the sides and base of the skull, and lateral to the temporal lobes of the cerebrum." [Wikipedia:Temporal_bone]
Xrefs:
links:

EHDAA:6035
EMAPA:17682
EMAPA:18020
FMA:52737
GAID:232
[1]
MA:0001476
MESH:A.02.835.232.781.885
ncithesaurus:Temporal_Bone
OpenCyc:Mx4rvbkAk5wpEbGdrcN5Y29ycA
SCTID:181795004

VHOG:0000800
Comments:The temporal bone consists of four parts: * Squama temporalis * Mastoid portion * Petrous portion (Petrosal ridge) * Tympanic part. Note the Temporal bone is not explicitly categorized to a part of the cranium in FMA.
Alt_id: UBERON:FMA_52737-MA_0001476
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003465(),UBERON:0008193(pneumatized bone)
part_of:UBERON:0002241(chondrocranium)



Children

part of:UBERON:0001694 (petrous part of temporal bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001678 (temporal bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_329b6ed7138a6c61a2ec9877f02c3792p11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_329b6ed7138a6c61a2ec9877f02c3792p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_329b6ed7138a6c61a2ec9877f02c3792p5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_329b6ed7138a6c61a2ec9877f02c3792p21@Espn
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_329b6ed7138a6c61a2ec9877f02c3792p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_329b6ed7138a6c61a2ec9877f02c3792p10@Otof
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_329b6ed7138a6c61a2ec9877f02c3792p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_329b6ed7138a6c61a2ec9877f02c3792p5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_329b6ed7138a6c61a2ec9877f02c3792p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_329b6ed7138a6c61a2ec9877f02c3792p3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_329b6ed7138a6c61a2ec9877f02c3792p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_329b6ed7138a6c61a2ec9877f02c3792p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_329b6ed7138a6c61a2ec9877f02c3792p5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_329b6ed7138a6c61a2ec9877f02c3792p7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_329b6ed7138a6c61a2ec9877f02c3792p4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_329b6ed7138a6c61a2ec9877f02c3792p7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_329b6ed7138a6c61a2ec9877f02c3792p6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_329b6ed7138a6c61a2ec9877f02c3792p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_329b6ed7138a6c61a2ec9877f02c3792p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_329b6ed7138a6c61a2ec9877f02c3792p3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_329b6ed7138a6c61a2ec9877f02c3792p4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_329b6ed7138a6c61a2ec9877f02c3792p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_329b6ed7138a6c61a2ec9877f02c3792p9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_329b6ed7138a6c61a2ec9877f02c3792p5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_329b6ed7138a6c61a2ec9877f02c3792p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_329b6ed7138a6c61a2ec9877f02c3792p13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_329b6ed7138a6c61a2ec9877f02c3792p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_329b6ed7138a6c61a2ec9877f02c3792p5@Tecta

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