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Revision as of 17:12, 15 June 2012

Name:vein
Definition:"Any of the tubular branching vessels that carry blood from the capillaries toward the heart." [Wikipedia:Vein]
Xrefs:
links:

AAO:0010212
AEO:0000209
BTO:0000234
EFO:0000816
EHDAA2:0003254
EV:0100031
FMA:50723
GAID:492
galen:Vein
[ 200px-Venous_system_en.svg.png 200px-Venous_system_en.svg.png]
MA:0000067
MAT:0000037
MESH:A.07.231.908
MIAA:0000037
ncithesaurus:Vein
OpenCyc:Mx4rvVjkWpwpEbGdrcN5Y29ycA
SCTID:181367001
TAO:0000082
VHOG:0001252
XAO:0000115

ZFA:0000082
Synonyms: "venous subtree" BROAD []
"venous tree organ part" EXACT []
"venous vessel" BROAD []
Comments:TODO - check with MA - vein vs venous blood vessel
Alt_id: UBERON:FMA_50723-MA_0000066-MA_0000067-MIAA_0000037-XAO_0000115-ZFA_0000082
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003920(venous blood vessel)



Children

is a:UBERON:0002066 (umbilical vein)
derives from:FF:0010191 (human vein - adult sample)
part of:CL:0002543 (vein endothelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001638 (vein), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.63e-79FFCP PHASE1:Hg19::chr19:7861475..7861491,+#_bcd1311704e3091c09c9d9d8acfdcdf5p@chr19:7861475..7861491, +
4.63e-79FFCP PHASE2:Hg19::chr19:7861475..7861491,+#_bcd1311704e3091c09c9d9d8acfdcdf5p@chr19:7861475..7861491, +
3.75e-66FFCP PHASE1:Hg19::chr5:120649811..120649848,+#_17f60debf9833d7f2858950cbd33eb0dp@chr5:120649811..120649848, +
3.75e-66FFCP PHASE2:Hg19::chr5:120649811..120649848,+#_17f60debf9833d7f2858950cbd33eb0dp@chr5:120649811..120649848, +
5.48e-53FFCP PHASE1:Hg19::chr9:35754222..35754237,-#_e187acce7750ab70eefaac47665423c3p3@MSMP
5.48e-53FFCP PHASE2:Hg19::chr9:35754222..35754237,-#_e187acce7750ab70eefaac47665423c3p3@MSMP
6.77e-49FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_bd77980559a9f9ba8187bf28ba3772d1p@chr9:139563124..139563129, +
6.77e-49FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_bd77980559a9f9ba8187bf28ba3772d1p@chr9:139563124..139563129, +
8.62e-47FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_8b8f03dd4ea8b2599500932a0a50fd7fp7@WDFY4
8.62e-47FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_8b8f03dd4ea8b2599500932a0a50fd7fp7@WDFY4
9.75e-45FFCP PHASE2:Hg19::chr1:78512168..78512171,-#_cc943d47d992ea63f07b2986456c32d5p@chr1:78512168..78512171, -
9.75e-45FFCP PHASE1:Hg19::chr1:78512168..78512171,-#_cc943d47d992ea63f07b2986456c32d5p@chr1:78512168..78512171, -
3.18e-44FFCP PHASE1:Hg19::chr10:94590997..94591006,+#_5b1d0894c19f5bf3459a33a0a48417c7p11@EXOC6
3.18e-44FFCP PHASE2:Hg19::chr10:94590997..94591006,+#_5b1d0894c19f5bf3459a33a0a48417c7p11@EXOC6
4.77e-40FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_ac5c5ed69d2fc3f781952d78e91462dbp6@WDFY4
4.77e-40FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_ac5c5ed69d2fc3f781952d78e91462dbp6@WDFY4
1.49e-39FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_c73416ef58468e859074d3c57875beb1p@chr1:61415107..61415136, -
1.49e-39FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_c73416ef58468e859074d3c57875beb1p@chr1:61415107..61415136, -
2.39e-39FFCP PHASE1:Hg19::chr12:10794718..10794741,+#_9cca15159dc29f58b36d45059bece165p@chr12:10794718..10794741, +
2.39e-39FFCP PHASE2:Hg19::chr12:10794718..10794741,+#_9cca15159dc29f58b36d45059bece165p@chr12:10794718..10794741, +
3.02e-39FFCP PHASE2:Hg19::chr10:82173423..82173439,+#_e081e5954bc0f33889508b1e37cd5facp5@FAM213A
3.02e-39FFCP PHASE1:Hg19::chr10:82173423..82173439,+#_e081e5954bc0f33889508b1e37cd5facp5@FAM213A
3.51e-38FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_b46bb77cb303c757513ab8e9c9ab9b7bp5@PARP12
3.51e-38FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_b46bb77cb303c757513ab8e9c9ab9b7bp5@PARP12
1.04e-37FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_2e45a5e07a5cfc69bfca0caf7914ef5cp11@MANSC1
1.04e-37FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_2e45a5e07a5cfc69bfca0caf7914ef5cp11@MANSC1
1.43e-37FFCP PHASE1:Hg19::chr9:139559213..139559241,+#_01b4ac5fb303348deb7bf6192bc28b3fp5@EGFL7
1.43e-37FFCP PHASE2:Hg19::chr9:139559213..139559241,+#_01b4ac5fb303348deb7bf6192bc28b3fp5@EGFL7
6.69e-36FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_14ebb54bfa515ba852a42b87096098f6p@chr1:172926077..172926120, -
6.69e-36FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_14ebb54bfa515ba852a42b87096098f6p@chr1:172926077..172926120, -
9.57e-36FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_3ce49b3e81af73d743f7b24b1e021f0dp@chr6:11607864..11607875, +
9.57e-36FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_3ce49b3e81af73d743f7b24b1e021f0dp@chr6:11607864..11607875, +
3.67e-35FFCP PHASE1:Hg19::chr7:106720036..106720059,-#_da2101c1804f7a0fd41b6e781e5c90b4p@chr7:106720036..106720059, -
3.67e-35FFCP PHASE2:Hg19::chr7:106720036..106720059,-#_da2101c1804f7a0fd41b6e781e5c90b4p@chr7:106720036..106720059, -
1.05e-34FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_3098f66b699753ca0ec9ba27c2f54cb2p@chr6:78171774..78171792, +
1.05e-34FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_3098f66b699753ca0ec9ba27c2f54cb2p@chr6:78171774..78171792, +
8.87e-34FFCP PHASE1:Hg19::chr10:94590950..94590955,+#_99eae0546c4467804812b8bb0f5965ecp13@EXOC6
8.87e-34FFCP PHASE2:Hg19::chr10:94590950..94590955,+#_99eae0546c4467804812b8bb0f5965ecp13@EXOC6
8.87e-34FFCP PHASE1:Hg19::chr1:78510648..78510661,+#_99eae0546c4467804812b8bb0f5965ecp7@GIPC2
8.87e-34FFCP PHASE2:Hg19::chr1:78510648..78510661,+#_99eae0546c4467804812b8bb0f5965ecp7@GIPC2
1.55e-33FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_f2d72e494705b33b86d0815653ce82a8p12@KSR2
1.55e-33FFCP PHASE1:Hg19::chr2:72789511..72789554,-#_f2d72e494705b33b86d0815653ce82a8p@chr2:72789511..72789554, -
1.55e-33FFCP PHASE2:Hg19::chr2:72789511..72789554,-#_f2d72e494705b33b86d0815653ce82a8p@chr2:72789511..72789554, -
1.55e-33FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_f2d72e494705b33b86d0815653ce82a8p12@KSR2
1.73e-33FFCP PHASE1:Hg19::chr12:105962745..105962748,+#_617e81524438d9aad8eea72214de69a3p@chr12:105962745..105962748, +
1.73e-33FFCP PHASE2:Hg19::chr12:105962745..105962748,+#_617e81524438d9aad8eea72214de69a3p@chr12:105962745..105962748, +
3.04e-33FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_6402eb1dfe8f2a428fbfe860932e912dp@chr3:43538305..43538325, -
3.04e-33FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_6402eb1dfe8f2a428fbfe860932e912dp@chr3:43538305..43538325, -
2.06e-32FFCP PHASE1:Hg19::chr1:186946611..186946622,+#_e43403b23a9f7ceaaf0c3073b4a1eb1cp@chr1:186946611..186946622, +
2.06e-32FFCP PHASE2:Hg19::chr1:186946611..186946622,+#_e43403b23a9f7ceaaf0c3073b4a1eb1cp@chr1:186946611..186946622, +
2.62e-32FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_4db1f3c247233752a0f9f50b56cdea6cp12@PARP12
2.62e-32FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_4db1f3c247233752a0f9f50b56cdea6cp12@PARP12
4.23e-31FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_c8a152d050bbdec96449b8091adf9c7dp@chr6:78171746..78171769, +
4.23e-31FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_c8a152d050bbdec96449b8091adf9c7dp@chr6:78171746..78171769, +
4.39e-31FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_12ea5f3428a0abf5a3461ebccd90e3b5p@chr1:22264210..22264241, +
4.39e-31FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_12ea5f3428a0abf5a3461ebccd90e3b5p@chr1:22264210..22264241, +
7.0e-31FFCP PHASE1:Hg19::chr18:22932208..22932219,-#_0f60d8d294585fe1a21fb2d1607af098p6@ZNF521
7.0e-31FFCP PHASE2:Hg19::chr18:22932208..22932219,-#_0f60d8d294585fe1a21fb2d1607af098p6@ZNF521
3.09e-30FFCP PHASE1:Hg19::chr4:162563953..162563962,-#_f8641936d7a38b2ae8d65d64ac7560d2p@chr4:162563953..162563962, -
3.09e-30FFCP PHASE2:Hg19::chr4:162563953..162563962,-#_f8641936d7a38b2ae8d65d64ac7560d2p@chr4:162563953..162563962, -
7.85e-30FFCP PHASE1:Hg19::chr5:71853090..71853107,+#_27f5a2bd012987dc130e6a3b0b8e963bp@chr5:71853090..71853107, +
7.85e-30FFCP PHASE2:Hg19::chr5:71853090..71853107,+#_27f5a2bd012987dc130e6a3b0b8e963bp@chr5:71853090..71853107, +
8.25e-30FFCP PHASE1:Hg19::chr22:50331023..50331030,+#_23b076c9b04496d89eeefab0cf5584f4p@chr22:50331023..50331030, +
8.25e-30FFCP PHASE2:Hg19::chr22:50331023..50331030,+#_23b076c9b04496d89eeefab0cf5584f4p@chr22:50331023..50331030, +
1.15e-29FFCP PHASE1:Hg19::chr12:105863627..105863633,+#_0ef46d7f8031022fc5ee2e198ebdb94bp@chr12:105863627..105863633, +
1.15e-29FFCP PHASE2:Hg19::chr12:105863627..105863633,+#_0ef46d7f8031022fc5ee2e198ebdb94bp@chr12:105863627..105863633, +
1.66e-29FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_0ded93e5813293beda1f0e335e403cb2p@chr10:99655692..99655725, -
1.66e-29FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_0ded93e5813293beda1f0e335e403cb2p@chr10:99655692..99655725, -
3.22e-29FFCP PHASE1:Hg19::chr13:75941109..75941132,-#_4446d94f1e9e6c803ee5275d554db915p@chr13:75941109..75941132, -
3.22e-29FFCP PHASE2:Hg19::chr13:75941109..75941132,-#_4446d94f1e9e6c803ee5275d554db915p@chr13:75941109..75941132, -
6.2e-29FFCP PHASE1:Hg19::chr1:78511901..78511912,+#_a54412825ef9ddbccc483381e06f99e7p6@GIPC2
6.2e-29FFCP PHASE2:Hg19::chr1:78511901..78511912,+#_a54412825ef9ddbccc483381e06f99e7p6@GIPC2
7.5e-29FFCP PHASE1:Hg19::chr1:186946659..186946664,+#_5dcbad4aec1a3ba7a1198bb0b3274dcdp@chr1:186946659..186946664, +
7.5e-29FFCP PHASE2:Hg19::chr1:186946659..186946664,+#_5dcbad4aec1a3ba7a1198bb0b3274dcdp@chr1:186946659..186946664, +
7.78e-29FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_bfb8107820d7fd6e7a60a19bea951503p1@MIR216A
7.78e-29FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_bfb8107820d7fd6e7a60a19bea951503p1@MIR216A
9.25e-29FFCP PHASE2:Hg19::chr21:39869867..39869880,-#_ea134398f9a18e68430f7b0a73f22046p@chr21:39869867..39869880, -
9.25e-29FFCP PHASE1:Hg19::chr21:39869867..39869880,-#_ea134398f9a18e68430f7b0a73f22046p@chr21:39869867..39869880, -
9.98e-29FFCP PHASE1:Hg19::chr11:59875891..59875903,-#_bbe1b53251c88c7e73ebbadf41abffefp@chr11:59875891..59875903, -
9.98e-29FFCP PHASE2:Hg19::chr11:59875891..59875903,-#_bbe1b53251c88c7e73ebbadf41abffefp@chr11:59875891..59875903, -
3.37e-28FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_d17208321a19d709fbfebe479b6431d2p@chr12:105863705..105863718, +
3.37e-28FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_d17208321a19d709fbfebe479b6431d2p@chr12:105863705..105863718, +
4.57e-28FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_d24a45218db606308922085a18d0e389p10@PTPRB
4.57e-28FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_d24a45218db606308922085a18d0e389p10@PTPRB
4.79e-28FFCP PHASE1:Hg19::chr19:47220191..47220198,-#_ac7a9f3842ad6605430adfdebdae47f2p14@PRKD2
4.79e-28FFCP PHASE2:Hg19::chr19:47220191..47220198,-#_ac7a9f3842ad6605430adfdebdae47f2p14@PRKD2
1.4e-27FFCP PHASE1:Hg19::chr6:142622846..142622853,+#_4e03c3304d9742ed8f27fab07ba0315ep12@GPR126
1.4e-27FFCP PHASE2:Hg19::chr6:142622846..142622853,+#_4e03c3304d9742ed8f27fab07ba0315ep12@GPR126
2.78e-27FFCP PHASE1:Hg19::chr12:6232421..6232447,-#_9952470968cee421b2ff1bf9f7e7e374p8@VWF
2.78e-27FFCP PHASE2:Hg19::chr12:6232421..6232447,-#_9952470968cee421b2ff1bf9f7e7e374p8@VWF
6.96e-27FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_d0cd9ee6f3d20e81097549ce3380ee4ap20@FRY
6.96e-27FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_d0cd9ee6f3d20e81097549ce3380ee4ap20@FRY
1.14e-26FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_db966f00dd5c36b7fc55f1d1524a55fdp1@ENST00000513158
1.14e-26FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_db966f00dd5c36b7fc55f1d1524a55fdp1@ENST00000513158
1.47e-26FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_14bcf57615ffc7a01272b9fd71ba9436p@chr18:33046982..33046991, -
1.47e-26FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_14bcf57615ffc7a01272b9fd71ba9436p@chr18:33046982..33046991, -
1.93e-26FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_956bf2d1590b0645d18ab7e85c9c149fp@chr12:105863636..105863650, +
1.93e-26FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_956bf2d1590b0645d18ab7e85c9c149fp@chr12:105863636..105863650, +
6.75e-26FFCP PHASE1:Hg19::chr1:2485709..2485728,+#_a94c9b5b3a643967044ca5cc2950401cp@chr1:2485709..2485728, +
6.75e-26FFCP PHASE2:Hg19::chr1:2485709..2485728,+#_a94c9b5b3a643967044ca5cc2950401cp@chr1:2485709..2485728, +

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