UBERON:0001282: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001282
|name=intralobular bile duct
|namespace=
|def="The Canals of Hering, or intrahepatic bile ductules, are part of the outflow system of exocrine ...") |
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|part_of=UBERON:0001172;;UBERON:0004647 | |part_of=UBERON:0001172;;UBERON:0004647 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:12, 15 June 2012
| Name: | intralobular bile duct | ||
|---|---|---|---|
| Definition: | "The Canals of Hering, or intrahepatic bile ductules, are part of the outflow system of exocrine bile product from the liver." [Wikipedia:Canals_of_Hering] | ||
| Xrefs: |
| ||
| Synonyms: |
"canal of Hering" RELATED [] "canal of Herring" EXACT [FMA:17545] "canals of Hering" RELATED PLURAL [Wikipedia:Canals_of_Hering] "cholangiole" EXACT [FMA:17545] "duct of Herring" RELATED [Wikipedia:Canals_of_Hering] "intrahepatic bile ductule" RELATED [Wikipedia:Canals_of_Hering] | ||
| Comments: | Editor notes: Note that this is part of the intrahepatic bile duct in MA, as this class is more alike the tree in FMA. Note also that SCT has canal of Hering and Entire IBduct as the only sibling terms under 'Structure of intralobular bile duct' (i.e. the CoH is the only part of the entire IBduct) | ||
| Alt_id: | UBERON:FMA_17545-MA_0002669 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003704(intrahepatic bile duct) |
|---|---|
| part_of: | UBERON:0001172(hepatic acinus),UBERON:0004647(liver lobule) |
Children
| derives from: | FF:0102842 (cholangioma cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001282 (intralobular bile duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:77795673..77795689,-#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr11:77795673..77795689, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:207059144..207059147,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr1:207059144..207059147, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:207059144..207059147,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr1:207059144..207059147, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:166513744..166513789,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr4:166513744..166513789, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:166513744..166513789,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr4:166513744..166513789, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:77795673..77795689,-#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr11:77795673..77795689, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:1101041..1101044,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr18:1101041..1101044, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr13:88008760..88008795,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr13:88008760..88008795, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545407..234545408,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p9@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545407..234545408,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p9@UGT1A10 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:1101041..1101044,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr18:1101041..1101044, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr13:88008760..88008795,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p@chr13:88008760..88008795, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545437..234545446,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p4@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545437..234545446,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p4@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:45826350..45826387,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p22@TRPM2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr21:45826350..45826387,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p22@TRPM2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545708..234545716,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p5@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545708..234545716,+#_0faa5b08801d4d3d8acfcec0799e4af7 | p5@UGT1A10 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr11:73874637..73874639,+#_359c7dcf2c54171dc28fd163751df447 | p@chr11:73874637..73874639, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:52786654..52786665,-#_359c7dcf2c54171dc28fd163751df447 | p@chr5:52786654..52786665, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:52786654..52786665,-#_359c7dcf2c54171dc28fd163751df447 | p@chr5:52786654..52786665, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:98605781..98605792,+#_359c7dcf2c54171dc28fd163751df447 | p34@IPO5 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32522832..32522842,-#_359c7dcf2c54171dc28fd163751df447 | p@chr6:32522832..32522842, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:98605781..98605792,+#_359c7dcf2c54171dc28fd163751df447 | p34@IPO5 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32522832..32522842,-#_359c7dcf2c54171dc28fd163751df447 | p@chr6:32522832..32522842, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:158155402..158155409,-#_359c7dcf2c54171dc28fd163751df447 | p3@ENST00000410472 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:158155402..158155409,-#_359c7dcf2c54171dc28fd163751df447 | p3@ENST00000410472 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr11:73874637..73874639,+#_359c7dcf2c54171dc28fd163751df447 | p@chr11:73874637..73874639, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:158005569..158005571,-#_065033d902d77f995cee03a91ff45361 | p@chr2:158005569..158005571, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:158005569..158005571,-#_065033d902d77f995cee03a91ff45361 | p@chr2:158005569..158005571, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:7904519..7904534,-#_065033d902d77f995cee03a91ff45361 | p1@ENST00000529488, p1@ENST00000533634 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:26936427..26936432,-#_065033d902d77f995cee03a91ff45361 | p@chr9:26936427..26936432, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:26936427..26936432,-#_065033d902d77f995cee03a91ff45361 | p@chr9:26936427..26936432, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:7904519..7904534,-#_065033d902d77f995cee03a91ff45361 | p1@ENST00000529488, p1@ENST00000533634 |
| 2.55e-98 | FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_065033d902d77f995cee03a91ff45361 | p3@FMR1NB |
| 2.55e-98 | FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_065033d902d77f995cee03a91ff45361 | p3@FMR1NB |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:234545393..234545403,+#_618f4b9c959bfa94e6d84523875d00cc | p3@UGT1A10 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:234545393..234545403,+#_618f4b9c959bfa94e6d84523875d00cc | p3@UGT1A10 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:33469231..33469240,+#_618f4b9c959bfa94e6d84523875d00cc | p@chr4:33469231..33469240, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:33469231..33469240,+#_618f4b9c959bfa94e6d84523875d00cc | p@chr4:33469231..33469240, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr15:32969649..32969656,+#_618f4b9c959bfa94e6d84523875d00cc | p14@SCG5 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr15:32969649..32969656,+#_618f4b9c959bfa94e6d84523875d00cc | p14@SCG5 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr6:117747000..117747010,-#_618f4b9c959bfa94e6d84523875d00cc | p9@ROS1 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr6:117747000..117747010,-#_618f4b9c959bfa94e6d84523875d00cc | p9@ROS1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:33469257..33469268,+#_afbc3fd5f90335d4db2f46c963524d45 | p@chr4:33469257..33469268, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:33469257..33469268,+#_afbc3fd5f90335d4db2f46c963524d45 | p@chr4:33469257..33469268, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr22:49769903..49769910,+#_ca8ca5ecc1b7506fcb1ad7905bf6099b | p@chr22:49769903..49769910, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr22:49769903..49769910,+#_ca8ca5ecc1b7506fcb1ad7905bf6099b | p@chr22:49769903..49769910, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:106556772..106556810,-#_7799bb5ebe002517bfae62ce96420490 | p@chr3:106556772..106556810, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:32522809..32522827,-#_7799bb5ebe002517bfae62ce96420490 | p@chr6:32522809..32522827, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:106556772..106556810,-#_7799bb5ebe002517bfae62ce96420490 | p@chr3:106556772..106556810, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:32522809..32522827,-#_7799bb5ebe002517bfae62ce96420490 | p@chr6:32522809..32522827, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:72255927..72255937,+#_7799bb5ebe002517bfae62ce96420490 | p@chr6:72255927..72255937, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr18:514455..514467,+#_7799bb5ebe002517bfae62ce96420490 | p@chr18:514455..514467, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:72255927..72255937,+#_7799bb5ebe002517bfae62ce96420490 | p@chr6:72255927..72255937, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr18:514455..514467,+#_7799bb5ebe002517bfae62ce96420490 | p@chr18:514455..514467, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr4:5526611..5526614,-#_e792e30f0dc1d90d91a8f74f57d5c023 | p@chr4:5526611..5526614, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr4:5526611..5526614,-#_e792e30f0dc1d90d91a8f74f57d5c023 | p@chr4:5526611..5526614, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:187867941..187867952,+#_e792e30f0dc1d90d91a8f74f57d5c023 | p1@ENST00000453517 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:187867941..187867952,+#_e792e30f0dc1d90d91a8f74f57d5c023 | p1@ENST00000453517 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr11:77794459..77794475,+#_e792e30f0dc1d90d91a8f74f57d5c023 | p@chr11:77794459..77794475, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr11:77794459..77794475,+#_e792e30f0dc1d90d91a8f74f57d5c023 | p@chr11:77794459..77794475, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:10597500..10597509,-#_45a49777d38e3bc7ce33ac248626066b | p2@uc011abv.1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:10597500..10597509,-#_45a49777d38e3bc7ce33ac248626066b | p2@uc011abv.1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:77792240..77792241,+#_45a49777d38e3bc7ce33ac248626066b | p@chr11:77792240..77792241, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr20:50479417..50479427,-#_45a49777d38e3bc7ce33ac248626066b | p2@ENST00000438154 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr20:50479417..50479427,-#_45a49777d38e3bc7ce33ac248626066b | p2@ENST00000438154 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:77792240..77792241,+#_45a49777d38e3bc7ce33ac248626066b | p@chr11:77792240..77792241, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:29774431..29774441,-#_45a49777d38e3bc7ce33ac248626066b | p@chr21:29774431..29774441, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:29774431..29774441,-#_45a49777d38e3bc7ce33ac248626066b | p@chr21:29774431..29774441, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr22:49769966..49769971,+#_45a49777d38e3bc7ce33ac248626066b | p@chr22:49769966..49769971, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr22:49769966..49769971,+#_45a49777d38e3bc7ce33ac248626066b | p@chr22:49769966..49769971, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chrX:70798285..70798290,+#_c753eb3d919cfd36fd92111250c2e965 | p1@ACRC |
| 6.58e-50 | FFCP PHASE1:Hg19::chrX:70798285..70798290,+#_c753eb3d919cfd36fd92111250c2e965 | p1@ACRC |
| 6.58e-50 | FFCP PHASE2:Hg19::chr5:5146235..5146246,+#_c753eb3d919cfd36fd92111250c2e965 | p7@ADAMTS16 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr5:5146235..5146246,+#_c753eb3d919cfd36fd92111250c2e965 | p7@ADAMTS16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:19928351..19928358,+#_c753eb3d919cfd36fd92111250c2e965 | p2@ENST00000535764 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr12:19928351..19928358,+#_c753eb3d919cfd36fd92111250c2e965 | p2@ENST00000535764 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr21:28899015..28899027,+#_c753eb3d919cfd36fd92111250c2e965 | p@chr21:28899015..28899027, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr21:28899015..28899027,+#_c753eb3d919cfd36fd92111250c2e965 | p@chr21:28899015..28899027, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:1099004..1099011,+#_fdb9bd12d843dff23c16609564ac206b | p@chr18:1099004..1099011, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:38402050..38402059,+#_fdb9bd12d843dff23c16609564ac206b | p@chr2:38402050..38402059, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:38402050..38402059,+#_fdb9bd12d843dff23c16609564ac206b | p@chr2:38402050..38402059, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:1099004..1099011,+#_fdb9bd12d843dff23c16609564ac206b | p@chr18:1099004..1099011, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr4:166513830..166513834,+#_fdb9bd12d843dff23c16609564ac206b | p@chr4:166513830..166513834, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr4:166513830..166513834,+#_fdb9bd12d843dff23c16609564ac206b | p@chr4:166513830..166513834, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chrX:147062877..147062885,+#_fdb9bd12d843dff23c16609564ac206b | p2@FMR1NB |
| 6.62e-41 | FFCP PHASE2:Hg19::chrX:147062877..147062885,+#_fdb9bd12d843dff23c16609564ac206b | p2@FMR1NB |
| 6.62e-41 | FFCP PHASE2:Hg19::chr6:75912602..75912613,-#_fdb9bd12d843dff23c16609564ac206b | p25@COL12A1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:98275000..98275016,-#_fdb9bd12d843dff23c16609564ac206b | p@chr3:98275000..98275016, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr6:75912602..75912613,-#_fdb9bd12d843dff23c16609564ac206b | p25@COL12A1 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:98275000..98275016,-#_fdb9bd12d843dff23c16609564ac206b | p@chr3:98275000..98275016, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:514484..514495,+#_fdb9bd12d843dff23c16609564ac206b | p@chr18:514484..514495, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:158155450..158155474,-#_fdb9bd12d843dff23c16609564ac206b | p1@ENST00000410472 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:158155450..158155474,-#_fdb9bd12d843dff23c16609564ac206b | p1@ENST00000410472 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:514484..514495,+#_fdb9bd12d843dff23c16609564ac206b | p@chr18:514484..514495, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr6:32515336..32515343,-#_577bbda9ff5893b4938d1f145d0c4af2 | p@chr6:32515336..32515343, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr1:75600333..75600348,+#_577bbda9ff5893b4938d1f145d0c4af2 | p5@LHX8 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr1:75600333..75600348,+#_577bbda9ff5893b4938d1f145d0c4af2 | p5@LHX8 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_577bbda9ff5893b4938d1f145d0c4af2 | p@chr12:127737083..127737103, - |
