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(Created page with "{{DOID |id=DOID:3904 |name=bronchogenic carcinoma |namespace= |def= |xref= |is_a=DOID:1325 |synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];...")
 
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|id=DOID:3904
|id=DOID:3904
|name=bronchogenic carcinoma
|name=bronchogenic carcinoma
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=MSH:D002283;;NCI:C35875;;SNOMEDCT_2010_1_31:154485001;;SNOMEDCT_2010_1_31:254622008;;SNOMEDCT_2010_1_31:269561006;;SNOMEDCT_2010_1_31:363493006;;UMLS_CUI:C0007121
|is_a=DOID:1325
|is_a=DOID:1325
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 14:00, 11 June 2012

Name:bronchogenic carcinoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D002283
NCI:C35875
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:254622008
SNOMEDCT_2010_1_31:269561006
SNOMEDCT_2010_1_31:363493006

UMLS_CUI:C0007121
Synonyms: "BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008]
"bronchial cancer" EXACT [CSP2005:2017-5516]
"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875]
"bronchogenic carcinoma" EXACT [CSP2005:2017-6052]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1325(bronchus cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3904 (bronchogenic carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr2:135119636..135119642,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:135119636..135119642, +
1.78e-29FFCP PHASE2:Hg19::chr8:97972117..97972120,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:97972117..97972120, -
1.78e-29FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_39df5efeecaef77fad20cc2f4b578036p@chr16:7411388..7411391, +
1.78e-29FFCP PHASE1:Hg19::chr15:62007373..62007374,-#_39df5efeecaef77fad20cc2f4b578036p2@ENST00000559590
1.78e-29FFCP PHASE2:Hg19::chr7:79840323..79840338,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:79840323..79840338, +
1.78e-29FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:111234799..111234807, -
1.78e-29FFCP PHASE2:Hg19::chr12:84664687..84664694,+#_39df5efeecaef77fad20cc2f4b578036p4@ENST00000547882
1.78e-29FFCP PHASE1:Hg19::chrX:97443927..97443947,+#_39df5efeecaef77fad20cc2f4b578036p@chrX:97443927..97443947, +
1.78e-29FFCP PHASE1:Hg19::chr2:91776712..91776739,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:91776712..91776739, +
1.78e-29FFCP PHASE2:Hg19::chr8:39970826..39970832,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:39970826..39970832, +
1.78e-29FFCP PHASE1:Hg19::chr12:54535470..54535475,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:54535470..54535475, +
1.78e-29FFCP PHASE2:Hg19::chr15:71685918..71685922,-#_39df5efeecaef77fad20cc2f4b578036p@chr15:71685918..71685922, -
1.78e-29FFCP PHASE2:Hg19::chr11:20362300..20362305,+#_39df5efeecaef77fad20cc2f4b578036p@chr11:20362300..20362305, +
1.78e-29FFCP PHASE1:Hg19::chr2:97626580..97626585,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626580..97626585, -
1.78e-29FFCP PHASE2:Hg19::chr8:57525935..57525942,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:57525935..57525942, +
1.78e-29FFCP PHASE1:Hg19::chr19:7834829..7834834,+#_39df5efeecaef77fad20cc2f4b578036p@chr19:7834829..7834834, +
1.78e-29FFCP PHASE2:Hg19::chr13:26155734..26155742,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:26155734..26155742, +
1.78e-29FFCP PHASE2:Hg19::chr10:129704395..129704457,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129704395..129704457, +
1.78e-29FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_39df5efeecaef77fad20cc2f4b578036p1@ENST00000430271
1.78e-29FFCP PHASE1:Hg19::chr3:86929211..86929219,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:86929211..86929219, +
1.78e-29FFCP PHASE1:Hg19::chr2:175412075..175412078,+#_39df5efeecaef77fad20cc2f4b578036p3@uc002uix.1
1.78e-29FFCP PHASE2:Hg19::chr7:26590563..26590574,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26590563..26590574, -
1.78e-29FFCP PHASE1:Hg19::chr5:28571974..28571978,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:28571974..28571978, -
1.78e-29FFCP PHASE1:Hg19::chr2:241625475..241625482,+#_39df5efeecaef77fad20cc2f4b578036p8@ENST00000407635
1.78e-29FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:140771120..140771128, +
1.78e-29FFCP PHASE2:Hg19::chr2:234862436..234862439,+#_39df5efeecaef77fad20cc2f4b578036p16@TRPM8
1.78e-29FFCP PHASE2:Hg19::chr1:100110807..100110818,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:100110807..100110818, +
1.78e-29FFCP PHASE1:Hg19::chr2:192805413..192805418,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:192805413..192805418, +
1.78e-29FFCP PHASE2:Hg19::chr7:7749088..7749127,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:7749088..7749127, +
1.78e-29FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_39df5efeecaef77fad20cc2f4b578036p@chr4:39301903..39301910, -
1.78e-29FFCP PHASE2:Hg19::chr3:95401565..95401581,-#_39df5efeecaef77fad20cc2f4b578036p2@ENST00000463799
1.78e-29FFCP PHASE2:Hg19::chr12:79756349..79756364,-#_39df5efeecaef77fad20cc2f4b578036p@chr12:79756349..79756364, -
1.78e-29FFCP PHASE2:Hg19::chr3:150914192..150914197,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:150914192..150914197, +
1.78e-29FFCP PHASE1:Hg19::chr2:97626013..97626024,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626013..97626024, +
1.78e-29FFCP PHASE2:Hg19::chrX:48394285..48394295,+#_39df5efeecaef77fad20cc2f4b578036p@chrX:48394285..48394295, +
1.78e-29FFCP PHASE2:Hg19::chr7:95775942..95775990,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:95775942..95775990, -
1.78e-29FFCP PHASE1:Hg19::chr14:60194318..60194325,-#_39df5efeecaef77fad20cc2f4b578036p22@RTN1
1.78e-29FFCP PHASE1:Hg19::chr13:76755731..76755739,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76755731..76755739, +
1.78e-29FFCP PHASE2:Hg19::chr19:46531064..46531073,+#_39df5efeecaef77fad20cc2f4b578036p@chr19:46531064..46531073, +
1.78e-29FFCP PHASE1:Hg19::chr21:16662950..16662957,-#_39df5efeecaef77fad20cc2f4b578036p@chr21:16662950..16662957, -
1.78e-29FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:37420947..37420953, +
1.78e-29FFCP PHASE2:Hg19::chr17:39140393..39140399,-#_39df5efeecaef77fad20cc2f4b578036p3@KRT40
1.78e-29FFCP PHASE1:Hg19::chr8:98073725..98073731,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98073725..98073731, -
1.78e-29FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_39df5efeecaef77fad20cc2f4b578036p20@RTN1
1.78e-29FFCP PHASE2:Hg19::chr13:76688920..76688924,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76688920..76688924, +
1.78e-29FFCP PHASE2:Hg19::chr10:29212181..29212188,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:29212181..29212188, +
1.78e-29FFCP PHASE1:Hg19::chrX:135761770..135761786,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:135761770..135761786, -
1.78e-29FFCP PHASE1:Hg19::chr7:120378721..120378730,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:120378721..120378730, -
1.78e-29FFCP PHASE2:Hg19::chr3:86701921..86701925,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:86701921..86701925, -
1.78e-29FFCP PHASE2:Hg19::chr17:59657604..59657621,-#_39df5efeecaef77fad20cc2f4b578036p@chr17:59657604..59657621, -
1.78e-29FFCP PHASE2:Hg19::chr11:73475071..73475076,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:73475071..73475076, -
1.78e-29FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_39df5efeecaef77fad20cc2f4b578036p14@DNMBP
1.78e-29FFCP PHASE1:Hg19::chr3:186548894..186548902,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:186548894..186548902, +
1.78e-29FFCP PHASE1:Hg19::chr2:51255348..51255351,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:51255348..51255351, +
1.78e-29FFCP PHASE2:Hg19::chr8:98104439..98104444,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98104439..98104444, -
1.78e-29FFCP PHASE2:Hg19::chr8:1616323..1616360,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:1616323..1616360, +
1.78e-29FFCP PHASE2:Hg19::chr5:33619084..33619089,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:33619084..33619089, -
1.78e-29FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:145094664..145094665, +
1.78e-29FFCP PHASE1:Hg19::chr8:57526601..57526612,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:57526601..57526612, +
1.78e-29FFCP PHASE1:Hg19::chr2:220607845..220607848,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:220607845..220607848, +
1.78e-29FFCP PHASE2:Hg19::chrX:154251771..154251775,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:154251771..154251775, -
1.78e-29FFCP PHASE1:Hg19::chr7:26590581..26590596,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26590581..26590596, -
1.78e-29FFCP PHASE1:Hg19::chr3:77129779..77129782,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:77129779..77129782, +
1.78e-29FFCP PHASE1:Hg19::chr18:28978481..28978484,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:28978481..28978484, -
1.78e-29FFCP PHASE1:Hg19::chr13:92571252..92571265,-#_39df5efeecaef77fad20cc2f4b578036p@chr13:92571252..92571265, -
1.78e-29FFCP PHASE2:Hg19::chr6:125378772..125378777,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:125378772..125378777, +
1.78e-29FFCP PHASE1:Hg19::chr8:98014001..98014041,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98014001..98014041, -
1.78e-29FFCP PHASE2:Hg19::chr2:97626375..97626385,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626375..97626385, -
1.78e-29FFCP PHASE1:Hg19::chr3:95401649..95401655,-#_39df5efeecaef77fad20cc2f4b578036p3@ENST00000463799
1.78e-29FFCP PHASE1:Hg19::chr21:43917055..43917058,-#_39df5efeecaef77fad20cc2f4b578036p@chr21:43917055..43917058, -

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