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         <style>
         <style>
             /* The Cytoscape Web container must have its dimensions set. */
             /* The Cytoscape Web container must have its dimensions set. */
             #cytoscapeweb { width: 100%; height: 100%; }
             #cytoscapeweb { width: 100%; height: 100%; }
         </style>
         </style>
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         <!-- Cytoscape Web JS API (needed to reference org.cytoscapeweb.Visualization) -->
         <!-- Cytoscape Web JS API (needed to reference org.cytoscapeweb.Visualization) -->
         <script type="text/javascript" src="/resource_browser/rb_js/cytoscapeweb/js/min/cytoscapeweb.min.js"></script>
         <script type="text/javascript" src="/resource_browser/rb_js/cytoscapeweb/js/min/cytoscapeweb.min.js"></script>
        <!-- Load data -->
<script type="text/javascript">
var request = new XMLHttpRequest();
request.open("GET", "https://fantom5-collaboration.gsc.riken.jp/resource_browser/nwfiles/10563-108A5.gml", false);
request.send(null);
xml = request.responseText;
</script>


<p>TF to TF network. Motif is an attribute of the source TF node.  Promoter is an attribute of the TF to TF edge.</p>
<p>TF to TF network. Motif is an attribute of the source TF node.  Promoter is an attribute of the TF to TF edge.</p>
          
          
         <script type="text/javascript">
         <script type="text/javascript">
            window.onload=function() {
$(function(){
                // id of Cytoscape Web container div
//var xml = '<?xml version="1.0" encoding="UTF-8"?><graphml xmlns="http://graphml.graphdrawing.org/xmlns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd"> <key id="zscore" for="edge" attr.name="zscore" attr.type="double"/> <key id="promoter" for="edge" attr.name="promoter" attr.type="string"/> <key id="motif" for="node" attr.name="motif" attr.type="string"/> <graph id="G" edgedefault="directed"> <edge id="e1" source="ADNP" target="EHF"> <data key="zscore">1.855803</data> <data key="promoter">chr11:34642612..34642646,+</data> </edge> <edge id="e2" source="ADNP" target="EHF"> <data key="zscore">2.728882</data> <data key="promoter">chr11:34642656..34642667,+</data> </edge> <edge id="e3" source="ADNP" target="SIX2"> <data key="zscore">1.689851</data> <data key="promoter">chr2:45236540..45236577,-</data> </edge> <edge id="e4" source="ADNP" target="ZFHX4"> <data key="zscore">2.786958</data> <data key="promoter">chr8:77593474..77593612,+</data> </edge> <edge id="e5" source="ARNTL2" target="NFIX"> <data key="zscore">2.512098</data> <data key="promoter">chr19:13106214..13106382,+</data> </edge> <edge id="e6" source="ARNTL2" target="ZNF507"> <data key="zscore">4.290077</data> <data key="promoter">chr19:32836499..32836551,+</data> </edge> <edge id="e7" source="ARNTL2" target="ZNF593"> <data key="zscore">6.795832</data> <data key="promoter">chr1:26496382..26496457,+</data> </edge> <edge id="e8" source="ARNTL2" target="LYAR"> <data key="zscore">3.218736</data> <data key="promoter">chr4:4291861..4291913,-</data> </edge> <edge id="e9" source="ARNTL2" target="MATR3"> <data key="zscore">5.344587</data> <data key="promoter">chr5:138609782..138609826,+</data> </edge> <edge id="e10" source="ARNTL2" target="PLAGL1"> <data key="zscore">1.795280</data> <data key="promoter">chr6:144329384..144329405,-</data> </edge> <edge id="e11" source="ARNTL2" target="FOXP4"> <data key="zscore">4.201205</data> <data key="promoter">chr6:41514078..41514158,+</data> </edge> <edge id="e12" source="CDC5L" target="SOX15"> <data key="zscore">2.026144</data> <data key="promoter">chr17:7493405..7493419,-</data> </edge> <edge id="e13" source="CDC5L" target="TFAP2C"> <data key="zscore">2.842422</data> <data key="promoter">chr20:55204351..55204377,+</data> </edge> <edge id="e14" source="CDC5L" target="PCBP1"> <data key="zscore">3.387780</data> <data key="promoter">chr2:70314579..70314590,+</data> </edge> <edge id="e15" source="E2F1" target="E2F8"> <data key="zscore">13.881050</data> <data key="promoter">chr11:19262421..19262455,-</data> </edge> <edge id="e16" source="E2F1" target="PAX6"> <data key="zscore">7.520784</data> <data key="promoter">chr11:31832610..31832639,-</data> </edge> <edge id="e17" source="E2F1" target="PAX6"> <data key="zscore">4.551613</data> <data key="promoter">chr11:31832658..31832681,-</data> </edge> <edge id="e18" source="E2F1" target="DDB2"> <data key="zscore">8.634349</data> <data key="promoter">chr11:47236584..47236679,+</data> </edge> <edge id="e19" source="E2F1" target="CREBZF"> <data key="zscore">7.967076</data> <data key="promoter">chr11:85376121..85376181,-</data> </edge> <edge id="e20" source="E2F1" target="E2F7"> <data key="zscore">8.834300</data> <data key="promoter">chr12:77459306..77459365,-</data> </edge> <edge id="e21" source="E2F1" target="TFDP1"> <data key="zscore">12.764142</data> <data key="promoter">chr13:114238997..114239077,+</data> </edge> <edge id="e22" source="E2F1" target="ZNF828"> <data key="zscore">13.732920</data> <data key="promoter">chr13:115079949..115080022,+</data> </edge> <edge id="e23" source="E2F1" target="CTCF"> <data key="zscore">10.989668</data> <data key="promoter">chr16:67596417..67596497,+</data> </edge> <edge id="e24" source="E2F1" target="HOXB7"> <data key="zscore">5.976186</data> <data key="promoter">chr17:46687959..46688007,-</data> </edge> <edge id="e25" source="E2F1" target="DNMT1"> <data key="zscore">14.442942</data> <data key="promoter">chr19:10305581..10305646,-</data> </edge> <edge id="e26" source="E2F1" target="ZNF473"> <data key="zscore">12.242552</data> <data key="promoter">chr19:50529247..50529296,+</data> </edge> <edge id="e27" source="E2F1" target="ZSCAN22"> <data key="zscore">9.279835</data> <data key="promoter">chr19:58838369..58838439,+</data> </edge> <edge id="e28" source="E2F1" target="STIL"> <data key="zscore">11.896066</data> <data key="promoter">chr1:47779762..47779827,-</data> </edge> <edge id="e29" source="E2F1" target="ZNF644"> <data key="zscore">3.675427</data> <data key="promoter">chr1:91487553..91487612,-</data> </edge> <edge id="e30" source="E2F1" target="E2F1"> <data key="zscore">11.184354</data> <data key="promoter">chr20:32274179..32274213,-</data> </edge> <edge id="e31" source="E2F1" target="GMEB2"> <data key="zscore">3.649241</data> <data key="promoter">chr20:62258402..62258464,-</data> </edge> <edge id="e32" source="E2F1" target="TFDP2"> <data key="zscore">6.243192</data> <data key="promoter">chr3:141868293..141868355,-</data> </edge> <edge id="e33" source="E2F1" target="TFDP2"> <data key="zscore">6.980334</data> <data key="promoter">chr3:141868357..141868393,-</data> </edge> <edge id="e34" source="E2F1" target="MATR3"> <data key="zscore">5.335442</data> <data key="promoter">chr5:138629349..138629386,+</data> </edge> <edge id="e35" source="E2F1" target="MATR3"> <data key="zscore">9.145348</data> <data key="promoter">chr5:138629417..138629446,+</data> </edge> <edge id="e36" source="E2F1" target="E2F3"> <data key="zscore">11.747304</data> <data key="promoter">chr6:20402102..20402152,+</data> </edge> <edge id="e37" source="E2F1" target="SOX4"> <data key="zscore">5.461751</data> <data key="promoter">chr6:21593973..21593988,+</data> </edge> <edge id="e38" source="E2F1" target="TCF19"> <data key="zscore">11.251513</data> <data key="promoter">chr6:31126291..31126399,+</data> </edge> <edge id="e39" source="E2F1" target="GRHL2"> <data key="zscore">3.270715</data> <data key="promoter">chr8:102504651..102504683,+</data> </edge> <edge id="e40" source="E2F1" target="GRHL2"> <data key="zscore">4.898434</data> <data key="promoter">chr8:102504690..102504704,+</data> </edge> <edge id="e41" source="E2F1" target="MYC"> <data key="zscore">7.263588</data> <data key="promoter">chr8:128748470..128748487,+</data> </edge> <edge id="e42" source="E2F3" target="E2F8"> <data key="zscore">13.881050</data> <data key="promoter">chr11:19262421..19262455,-</data> </edge> <edge id="e43" source="E2F3" target="PAX6"> <data key="zscore">7.520784</data> <data key="promoter">chr11:31832610..31832639,-</data> </edge> <edge id="e44" source="E2F3" target="PAX6"> <data key="zscore">4.551613</data> <data key="promoter">chr11:31832658..31832681,-</data> </edge> <edge id="e45" source="E2F3" target="DDB2"> <data key="zscore">8.634349</data> <data key="promoter">chr11:47236584..47236679,+</data> </edge> <edge id="e46" source="E2F3" target="CREBZF"> <data key="zscore">7.967076</data> <data key="promoter">chr11:85376121..85376181,-</data> </edge> <edge id="e47" source="E2F3" target="E2F7"> <data key="zscore">8.834300</data> <data key="promoter">chr12:77459306..77459365,-</data> </edge> <edge id="e48" source="E2F3" target="TFDP1"> <data key="zscore">12.764142</data> <data key="promoter">chr13:114238997..114239077,+</data> </edge> <edge id="e49" source="E2F3" target="ZNF828"> <data key="zscore">13.732920</data> <data key="promoter">chr13:115079949..115080022,+</data> </edge> <edge id="e50" source="E2F3" target="CTCF"> <data key="zscore">10.989668</data> <data key="promoter">chr16:67596417..67596497,+</data> </edge> <edge id="e51" source="E2F3" target="HOXB7"> <data key="zscore">5.976186</data> <data key="promoter">chr17:46687959..46688007,-</data> </edge> <edge id="e52" source="E2F3" target="DNMT1"> <data key="zscore">14.442942</data> <data key="promoter">chr19:10305581..10305646,-</data> </edge> <edge id="e53" source="E2F3" target="ZNF473"> <data key="zscore">12.242552</data> <data key="promoter">chr19:50529247..50529296,+</data> </edge> <edge id="e54" source="E2F3" target="ZSCAN22"> <data key="zscore">9.279835</data> <data key="promoter">chr19:58838369..58838439,+</data> </edge> <edge id="e55" source="E2F3" target="STIL"> <data key="zscore">11.896066</data> <data key="promoter">chr1:47779762..47779827,-</data> </edge> <edge id="e56" source="E2F3" target="ZNF644"> <data key="zscore">3.675427</data> <data key="promoter">chr1:91487553..91487612,-</data> </edge> <edge id="e57" source="E2F3" target="E2F1"> <data key="zscore">11.184354</data> <data key="promoter">chr20:32274179..32274213,-</data> </edge> <edge id="e58" source="E2F3" target="GMEB2"> <data key="zscore">3.649241</data> <data key="promoter">chr20:62258402..62258464,-</data> </edge> <edge id="e59" source="E2F3" target="TFDP2"> <data key="zscore">6.243192</data> <data key="promoter">chr3:141868293..141868355,-</data> </edge> <edge id="e60" source="E2F3" target="TFDP2"> <data key="zscore">6.980334</data> <data key="promoter">chr3:141868357..141868393,-</data> </edge> <edge id="e61" source="E2F3" target="MATR3"> <data key="zscore">5.335442</data> <data key="promoter">chr5:138629349..138629386,+</data> </edge> <edge id="e62" source="E2F3" target="MATR3"> <data key="zscore">9.145348</data> <data key="promoter">chr5:138629417..138629446,+</data> </edge> <edge id="e63" source="E2F3" target="E2F3"> <data key="zscore">11.747304</data> <data key="promoter">chr6:20402102..20402152,+</data> </edge> <edge id="e64" source="E2F3" target="SOX4"> <data key="zscore">5.461751</data> <data key="promoter">chr6:21593973..21593988,+</data> </edge> <edge id="e65" source="E2F3" target="TCF19"> <data key="zscore">11.251513</data> <data key="promoter">chr6:31126291..31126399,+</data> </edge> <edge id="e66" source="E2F3" target="GRHL2"> <data key="zscore">3.270715</data> <data key="promoter">chr8:102504651..102504683,+</data> </edge> <edge id="e67" source="E2F3" target="GRHL2"> <data key="zscore">4.898434</data> <data key="promoter">chr8:102504690..102504704,+</data> </edge> <edge id="e68" source="E2F3" target="MYC"> <data key="zscore">7.263588</data> <data key="promoter">chr8:128748470..128748487,+</data> </edge> <edge id="e69" source="E2F4" target="E2F8"> <data key="zscore">13.881050</data> <data key="promoter">chr11:19262421..19262455,-</data> </edge> <edge id="e70" source="E2F4" target="PAX6"> <data key="zscore">7.520784</data> <data key="promoter">chr11:31832610..31832639,-</data> </edge> <edge id="e71" source="E2F4" target="PAX6"> <data key="zscore">4.551613</data> <data key="promoter">chr11:31832658..31832681,-</data> </edge> <edge id="e72" source="E2F4" target="DDB2"> <data key="zscore">8.634349</data> <data key="promoter">chr11:47236584..47236679,+</data> </edge> <edge id="e73" source="E2F4" target="CREBZF"> <data key="zscore">7.967076</data> <data key="promoter">chr11:85376121..85376181,-</data> </edge> <edge id="e74" source="E2F4" target="E2F7"> <data key="zscore">8.834300</data> <data key="promoter">chr12:77459306..77459365,-</data> </edge> <edge id="e75" source="E2F4" target="TFDP1"> <data key="zscore">12.764142</data> <data key="promoter">chr13:114238997..114239077,+</data> </edge> <edge id="e76" source="E2F4" target="ZNF828"> <data key="zscore">13.732920</data> <data key="promoter">chr13:115079949..115080022,+</data> </edge> <edge id="e77" source="E2F4" target="CTCF"> <data key="zscore">10.989668</data> <data key="promoter">chr16:67596417..67596497,+</data> </edge> <edge id="e78" source="E2F4" target="HOXB7"> <data key="zscore">5.976186</data> <data key="promoter">chr17:46687959..46688007,-</data> </edge> <edge id="e79" source="E2F4" target="DNMT1"> <data key="zscore">14.442942</data> <data key="promoter">chr19:10305581..10305646,-</data> </edge> <edge id="e80" source="E2F4" target="ZNF473"> <data key="zscore">12.242552</data> <data key="promoter">chr19:50529247..50529296,+</data> </edge> <edge id="e81" source="E2F4" target="ZSCAN22"> <data key="zscore">9.279835</data> <data key="promoter">chr19:58838369..58838439,+</data> </edge> <edge id="e82" source="E2F4" target="STIL"> <data key="zscore">11.896066</data> <data key="promoter">chr1:47779762..47779827,-</data> </edge> <edge id="e83" source="E2F4" target="ZNF644"> <data key="zscore">3.675427</data> <data key="promoter">chr1:91487553..91487612,-</data> </edge> <edge id="e84" source="E2F4" target="E2F1"> <data key="zscore">11.184354</data> <data key="promoter">chr20:32274179..32274213,-</data> </edge> <edge id="e85" source="E2F4" target="GMEB2"> <data key="zscore">3.649241</data> <data key="promoter">chr20:62258402..62258464,-</data> </edge> <edge id="e86" source="E2F4" target="TFDP2"> <data key="zscore">6.243192</data> <data key="promoter">chr3:141868293..141868355,-</data> </edge> <edge id="e87" source="E2F4" target="TFDP2"> <data key="zscore">6.980334</data> <data key="promoter">chr3:141868357..141868393,-</data> </edge> <edge id="e88" source="E2F4" target="MATR3"> <data key="zscore">5.335442</data> <data key="promoter">chr5:138629349..138629386,+</data> </edge> <edge id="e89" source="E2F4" target="MATR3"> <data key="zscore">9.145348</data> <data key="promoter">chr5:138629417..138629446,+</data> </edge> <edge id="e90" source="E2F4" target="E2F3"> <data key="zscore">11.747304</data> <data key="promoter">chr6:20402102..20402152,+</data> </edge> <edge id="e91" source="E2F4" target="SOX4"> <data key="zscore">5.461751</data> <data key="promoter">chr6:21593973..21593988,+</data> </edge> <edge id="e92" source="E2F4" target="TCF19"> <data key="zscore">11.251513</data> <data key="promoter">chr6:31126291..31126399,+</data> </edge> <edge id="e93" source="E2F4" target="GRHL2"> <data key="zscore">3.270715</data> <data key="promoter">chr8:102504651..102504683,+</data> </edge> <edge id="e94" source="E2F4" target="GRHL2"> <data key="zscore">4.898434</data> <data key="promoter">chr8:102504690..102504704,+</data> </edge> <edge id="e95" source="E2F4" target="MYC"> <data key="zscore">7.263588</data> <data key="promoter">chr8:128748470..128748487,+</data> </edge> <edge id="e96" source="FOXQ1" target="IRF3"> <data key="zscore">2.316201</data> <data key="promoter">chr19:50169013..50169062,-</data> </edge> <edge id="e97" source="FOXQ1" target="IRF3"> <data key="zscore">3.804406</data> <data key="promoter">chr19:50169064..50169121,-</data> </edge> <edge id="e98" source="ID1" target="NFIX"> <data key="zscore">2.512098</data> <data key="promoter">chr19:13106214..13106382,+</data> </edge> <edge id="e99" source="ID1" target="ZNF507"> <data key="zscore">4.290077</data> <data key="promoter">chr19:32836499..32836551,+</data> </edge> <edge id="e100" source="ID1" target="ZNF593"> <data key="zscore">6.795832</data> <data key="promoter">chr1:26496382..26496457,+</data> </edge> <edge id="e101" source="ID1" target="LYAR"> <data key="zscore">3.218736</data> <data key="promoter">chr4:4291861..4291913,-</data> </edge> <edge id="e102" source="ID1" target="MATR3"> <data key="zscore">5.344587</data> <data key="promoter">chr5:138609782..138609826,+</data> </edge> <edge id="e103" source="ID1" target="PLAGL1"> <data key="zscore">1.795280</data> <data key="promoter">chr6:144329384..144329405,-</data> </edge> <edge id="e104" source="ID1" target="FOXP4"> <data key="zscore">4.201205</data> <data key="promoter">chr6:41514078..41514158,+</data> </edge> <edge id="e105" source="MNT" target="NFIX"> <data key="zscore">2.512098</data> <data key="promoter">chr19:13106214..13106382,+</data> </edge> <edge id="e106" source="MNT" target="ZNF507"> <data key="zscore">4.290077</data> <data key="promoter">chr19:32836499..32836551,+</data> </edge> <edge id="e107" source="MNT" target="ZNF593"> <data key="zscore">6.795832</data> <data key="promoter">chr1:26496382..26496457,+</data> </edge> <edge id="e108" source="MNT" 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<edge id="e493" source="TFDP1" target="SREBF2"> <data key="zscore">5.174860</data> <data key="promoter">chr22:42229100..42229146,+</data> </edge> <edge id="e494" source="TFDP1" target="ZNF142"> <data key="zscore">4.327365</data> <data key="promoter">chr2:219524310..219524385,-</data> </edge> <edge id="e495" source="TFDP1" target="PCBP1"> <data key="zscore">3.915587</data> <data key="promoter">chr2:70314579..70314590,+</data> </edge> <edge id="e496" source="TFDP1" target="TFDP2"> <data key="zscore">3.609912</data> <data key="promoter">chr3:141868293..141868355,-</data> </edge> <edge id="e497" source="TFDP1" target="PITX1"> <data key="zscore">2.179763</data> <data key="promoter">chr5:134369905..134369972,-</data> </edge> <edge id="e498" source="TFDP1" target="FOXF2"> <data key="zscore">2.884532</data> <data key="promoter">chr6:1389789..1389821,+</data> </edge> <edge id="e499" source="TFDP1" target="TBP"> <data key="zscore">4.906298</data> <data key="promoter">chr6:170863423..170863484,+</data> </edge> <edge id="e500" source="TFDP1" target="E2F3"> <data key="zscore">4.181640</data> <data key="promoter">chr6:20402102..20402152,+</data> </edge> <edge id="e501" source="TFDP1" target="TCF19"> <data key="zscore">3.912595</data> <data key="promoter">chr6:31126291..31126399,+</data> </edge> <edge id="e502" source="TFDP1" target="DNAJC2"> <data key="zscore">2.885620</data> <data key="promoter">chr7:102985160..102985273,-</data> </edge> <edge id="e503" source="TFDP1" target="GTF2I"> <data key="zscore">5.249992</data> <data key="promoter">chr7:74072021..74072119,+</data> </edge> <edge id="e504" source="TFDP1" target="PHTF2"> <data key="zscore">4.217160</data> <data key="promoter">chr7:77428149..77428220,+</data> </edge> <edge id="e505" source="TFDP1" target="ZFPM2"> <data key="zscore">2.314781</data> <data key="promoter">chr8:106330656..106330684,+</data> </edge> <edge id="e506" source="TFDP1" target="ZNF623"> <data key="zscore">5.252320</data> <data key="promoter">chr8:144718171..144718244,+</data> </edge> <edge id="e507" source="TFDP1" target="SMARCA1"> <data key="zscore">2.836590</data> <data key="promoter">chrX:128657457..128657475,-</data> </edge> <edge id="e508" source="TFDP1" target="ATRX"> <data key="zscore">2.769957</data> <data key="promoter">chrX:77041685..77041716,-</data> </edge> <edge id="e509" source="TFE3" target="NFIX"> <data key="zscore">2.512098</data> <data key="promoter">chr19:13106214..13106382,+</data> </edge> <edge id="e510" source="TFE3" target="ZNF507"> <data key="zscore">4.290077</data> <data key="promoter">chr19:32836499..32836551,+</data> </edge> <edge id="e511" source="TFE3" target="ZNF593"> <data key="zscore">6.795832</data> <data key="promoter">chr1:26496382..26496457,+</data> </edge> <edge id="e512" source="TFE3" target="LYAR"> <data key="zscore">3.218736</data> <data key="promoter">chr4:4291861..4291913,-</data> </edge> <edge id="e513" source="TFE3" target="MATR3"> <data key="zscore">5.344587</data> <data key="promoter">chr5:138609782..138609826,+</data> </edge> <edge id="e514" source="TFE3" target="PLAGL1"> <data key="zscore">1.795280</data> <data key="promoter">chr6:144329384..144329405,-</data> </edge> <edge id="e515" source="TFE3" target="FOXP4"> <data key="zscore">4.201205</data> <data key="promoter">chr6:41514078..41514158,+</data> </edge> <edge id="e516" source="TP53" target="NFKB2"> <data key="zscore">2.111995</data> <data key="promoter">chr10:104155455..104155479,+</data> </edge> <edge id="e517" source="TP53" target="FOSL1"> <data key="zscore">4.122302</data> <data key="promoter">chr11:65667846..65667868,-</data> </edge> <edge id="e518" source="TP53" target="FOSL1"> <data key="zscore">4.682434</data> <data key="promoter">chr11:65667884..65667895,-</data> </edge> <edge id="e519" source="TP53" target="ZNF219"> <data key="zscore">5.836272</data> <data key="promoter">chr14:21566731..21566836,-</data> </edge> <edge id="e520" source="TP53" target="ZNF580"> <data key="zscore">6.446524</data> <data key="promoter">chr19:56152361..56152434,+</data> </edge> <edge id="e521" source="TP53" target="MTA3"> <data key="zscore">5.386089</data> <data key="promoter">chr2:42795745..42795824,+</data> </edge> <edge id="e522" source="TP53" target="KCMF1"> <data key="zscore">5.878198</data> <data key="promoter">chr2:85198369..85198483,+</data> </edge> <edge id="e523" source="TP53" target="HMGXB3"> <data key="zscore">5.859824</data> <data key="promoter">chr5:149380256..149380343,+</data> </edge> <edge id="e524" source="TP53" target="SOX7"> <data key="zscore">3.651812</data> <data key="promoter">chr8:10588010..10588030,-</data> </edge> <edge id="e525" source="TP53" target="ZFHX4"> <data key="zscore">3.295039</data> <data key="promoter">chr8:77593474..77593612,+</data> </edge> <edge id="e526" source="ZHX3" target="EHF"> <data key="zscore">1.855803</data> <data key="promoter">chr11:34642612..34642646,+</data> </edge> <edge id="e527" source="ZHX3" target="EHF"> <data key="zscore">2.728882</data> <data key="promoter">chr11:34642656..34642667,+</data> </edge> <edge id="e528" source="ZHX3" target="SIX2"> <data key="zscore">1.689851</data> <data key="promoter">chr2:45236540..45236577,-</data> </edge> <edge id="e529" source="ZHX3" target="ZFHX4"> <data key="zscore">2.786958</data> <data key="promoter">chr8:77593474..77593612,+</data> </edge> <edge id="e530" source="ZNF143" target="ZNF37A"> <data key="zscore">5.641238</data> <data key="promoter">chr10:38383255..38383324,+</data> </edge> <edge id="e531" source="ZNF143" target="TFAM"> <data key="zscore">5.990048</data> <data key="promoter">chr10:60145155..60145206,+</data> </edge> <edge id="e532" source="ZNF143" target="ZBTB44"> <data key="zscore">1.993314</data> <data key="promoter">chr11:130184753..130184824,-</data> </edge> <edge id="e533" source="ZNF143" target="E2F8"> <data key="zscore">5.692288</data> <data key="promoter">chr11:19262421..19262455,-</data> </edge> <edge id="e534" source="ZNF143" target="ZNF605"> <data key="zscore">6.351872</data> <data key="promoter">chr12:133532864..133532899,-</data> </edge> <edge id="e535" source="ZNF143" target="ZNF268"> <data key="zscore">5.534235</data> <data key="promoter">chr12:133758072..133758114,+</data> </edge> <edge id="e536" source="ZNF143" target="FOXM1"> <data key="zscore">4.500617</data> <data key="promoter">chr12:2986206..2986258,-</data> </edge> <edge id="e537" source="ZNF143" target="FOXM1"> <data key="zscore">4.286797</data> <data key="promoter">chr12:2986275..2986363,-</data> </edge> <edge id="e538" source="ZNF143" target="ZNF828"> <data key="zscore">8.320008</data> <data key="promoter">chr13:115079949..115080022,+</data> </edge> <edge id="e539" source="ZNF143" target="ZNF280D"> <data key="zscore">4.043317</data> <data key="promoter">chr15:57025675..57025718,-</data> </edge> <edge id="e540" source="ZNF143" target="CTCF"> <data key="zscore">5.557490</data> <data key="promoter">chr16:67596417..67596497,+</data> </edge> <edge id="e541" source="ZNF143" target="MYST2"> <data key="zscore">3.204059</data> <data key="promoter">chr17:47866034..47866060,+</data> </edge> <edge id="e542" source="ZNF143" target="UNK"> <data key="zscore">6.414470</data> <data key="promoter">chr17:73780879..73780963,+</data> </edge> <edge id="e543" source="ZNF143" target="SOX15"> <data key="zscore">1.657774</data> <data key="promoter">chr17:7493405..7493419,-</data> </edge> <edge id="e544" source="ZNF143" target="TP53"> <data key="zscore">3.153098</data> <data key="promoter">chr17:7590797..7590815,-</data> </edge> <edge id="e545" source="ZNF143" target="DNMT1"> <data key="zscore">6.589135</data> <data key="promoter">chr19:10305581..10305646,-</data> </edge> <edge id="e546" source="ZNF143" target="MLL4"> <data key="zscore">2.478568</data> <data key="promoter">chr19:36208877..36208919,+</data> </edge> <edge id="e547" source="ZNF143" target="PPP1R13L"> <data key="zscore">2.716506</data> <data key="promoter">chr19:45908292..45908374,-</data> </edge> <edge id="e548" source="ZNF143" target="ZNF473"> <data key="zscore">7.899083</data> <data key="promoter">chr19:50529247..50529296,+</data> </edge> <edge id="e549" source="ZNF143" target="ZNF460"> <data key="zscore">1.605576</data> <data key="promoter">chr19:57791806..57791875,+</data> </edge> <edge id="e550" source="ZNF143" target="ZNF544"> <data key="zscore">6.713557</data> <data key="promoter">chr19:58740266..58740297,+</data> </edge> <edge id="e551" source="ZNF143" target="ZNF8"> <data key="zscore">7.286126</data> <data key="promoter">chr19:58790314..58790358,+</data> </edge> <edge id="e552" source="ZNF143" target="ZSCAN22"> <data key="zscore">6.041168</data> <data key="promoter">chr19:58838369..58838439,+</data> </edge> <edge id="e553" source="ZNF143" target="ZNF584"> <data key="zscore">6.831995</data> <data key="promoter">chr19:58920000..58920057,+</data> </edge> <edge id="e554" source="ZNF143" target="ZNF324"> <data key="zscore">3.288172</data> <data key="promoter">chr19:58978418..58978456,+</data> </edge> <edge id="e555" source="ZNF143" target="ZNF358"> <data key="zscore">2.891525</data> <data key="promoter">chr19:7580944..7581031,+</data> </edge> <edge id="e556" source="ZNF143" target="ZC3H15"> <data key="zscore">3.959290</data> <data key="promoter">chr2:187350973..187351072,+</data> </edge> <edge id="e557" source="ZNF143" target="CREB1"> <data key="zscore">3.650453</data> <data key="promoter">chr2:208394658..208394692,+</data> </edge> <edge id="e558" source="ZNF143" target="MYNN"> <data key="zscore">2.470315</data> <data key="promoter">chr3:169491171..169491205,+</data> </edge> <edge id="e559" source="ZNF143" target="NFXL1"> <data key="zscore">6.010468</data> <data key="promoter">chr4:47916588..47916607,-</data> </edge> <edge id="e560" source="ZNF143" target="PITX1"> <data key="zscore">3.023254</data> <data key="promoter">chr5:134369905..134369972,-</data> </edge> <edge id="e561" source="ZNF143" target="MATR3"> <data key="zscore">3.436943</data> <data key="promoter">chr5:138629349..138629386,+</data> </edge> <edge id="e562" source="ZNF143" target="MATR3"> <data key="zscore">4.788216</data> <data key="promoter">chr5:138629417..138629446,+</data> </edge> <edge id="e563" source="ZNF143" target="HMGXB3"> <data key="zscore">4.129164</data> <data key="promoter">chr5:149380256..149380343,+</data> </edge> <edge id="e564" source="ZNF143" target="TFAP2A"> <data key="zscore">2.476260</data> <data key="promoter">chr6:10419768..10419819,-</data> </edge> <edge id="e565" source="ZNF143" target="RXRB"> <data key="zscore">6.106647</data> <data key="promoter">chr6:33168126..33168180,-</data> </edge> <edge id="e566" source="ZNF143" target="ZNF451"> <data key="zscore">3.848880</data> <data key="promoter">chr6:56954919..56955000,+</data> </edge> <edge id="e567" source="ZNF143" target="NFE2L3"> <data key="zscore">1.954109</data> <data key="promoter">chr7:26191809..26191890,+</data> </edge> <edge id="e568" source="ZNF143" target="RBAK"> <data key="zscore">5.281784</data> <data key="promoter">chr7:5085480..5085510,+</data> </edge> <edge id="e569" source="ZNF143" target="ZNF12"> <data key="zscore">2.212581</data> <data key="promoter">chr7:6746529..6746591,-</data> </edge> <edge id="e570" source="ZNF143" target="GTF2I"> <data key="zscore">7.341711</data> <data key="promoter">chr7:74072021..74072119,+</data> </edge> <edge id="e571" source="ZNF143" target="NFKBIL2"> <data key="zscore">5.455692</data> <data key="promoter">chr8:145669791..145669834,-</data> </edge> <node id="MLX"> <data key="motif"></data> </node> <node id="ZFP64"> <data key="motif"></data> </node> <node id="YBX1"> <data key="motif"></data> </node> <node id="YY1"> <data key="motif"></data> </node> <node id="ZNF766"> <data key="motif"></data> </node> <node id="E2F8"> <data key="motif"></data> </node> <node id="ZNF326"> <data key="motif"></data> </node> <node id="CARHSP1"> <data key="motif"></data> </node> <node id="ZNF143"> <data key="motif">ZNF143</data> </node> <node id="ENO1"> <data key="motif"></data> </node> <node id="ZHX3"> <data key="motif">ADNP_IRX_SIX_ZHX</data> </node> <node id="ZNF142"> <data key="motif"></data> </node> <node id="PHF5A"> <data key="motif"></data> </node> <node id="ZNF263"> <data key="motif"></data> </node> <node id="NPAS2"> <data key="motif">bHLH_family</data> </node> <node id="NFYC"> <data key="motif">NFY{A,B,C}</data> </node> <node id="ATRX"> <data key="motif"></data> </node> <node id="ZNF823"> <data key="motif"></data> </node> <node id="TERF1"> <data key="motif"></data> </node> <node id="CREB3L2"> <data key="motif"></data> </node> <node id="FOXP4"> <data key="motif"></data> </node> <node id="ZNF37A"> <data key="motif"></data> </node> <node id="ZNF8"> <data key="motif"></data> </node> <node id="SOX7"> <data key="motif"></data> </node> <node id="ZNF385A"> <data key="motif"></data> </node> <node id="POU2F3"> <data key="motif">POU2F1..3</data> </node> <node id="FOXF2"> <data key="motif"></data> </node> <node id="NFKB2"> <data key="motif"></data> </node> <node id="NFE2L3"> <data key="motif"></data> </node> <node id="CDC5L"> <data key="motif">CDC5L</data> </node> <node id="CAMTA1"> <data key="motif"></data> </node> <node id="TEAD3"> <data key="motif"></data> </node> <node id="ZNF324"> <data key="motif"></data> </node> <node id="DBP"> <data key="motif"></data> </node> <node id="ZFPM2"> <data key="motif"></data> </node> <node id="MYST2"> <data key="motif"></data> </node> <node id="EHF"> <data key="motif"></data> </node> <node id="PPP1R13L"> <data key="motif"></data> </node> <node id="TP53"> <data key="motif">TP53</data> </node> <node id="HES4"> <data key="motif"></data> </node> <node id="ZNF605"> <data key="motif"></data> </node> <node id="PITX1"> <data key="motif"></data> </node> <node id="MTA2"> <data key="motif"></data> </node> <node id="ZFHX4"> <data key="motif"></data> </node> <node 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                var div_id = "cytoscapeweb";
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key="type">tf</data> <data key="label">ZNF460</data> </node> <node id="tf_ZNF473"> <data key="type">tf</data> <data key="label">ZNF473</data> </node> <node id="tf_PRKRIR"> <data key="type">tf</data> <data key="label">PRKRIR</data> </node> <node id="tf_SREBF2"> <data key="type">tf</data> <data key="label">SREBF2</data> </node> <node id="tf_ZCCHC11"> <data key="type">tf</data> <data key="label">ZCCHC11</data> </node> <node id="tf_CREBZF"> <data key="type">tf</data> <data key="label">CREBZF</data> </node> <node id="tf_CIZ1"> <data key="type">tf</data> <data key="label">CIZ1</data> </node> <node id="tf_ADNP2"> <data key="type">tf</data> <data key="label">ADNP2</data> </node> <node id="tf_HLTF"> <data key="type">tf</data> <data key="label">HLTF</data> </node> <node id="tf_PCBP1"> <data key="type">tf</data> <data key="label">PCBP1</data> </node> <node id="tf_TFDP2"> <data key="type">tf</data> <data key="label">TFDP2</data> </node> <node id="tf_DNAJC2"> <data key="type">tf</data> <data key="label">DNAJC2</data> </node> <node id="tf_HMG20B"> <data key="type">tf</data> <data key="label">HMG20B</data> </node> <node id="tf_FOXQ1"> <data key="type">tf</data> <data key="label">FOXQ1</data> </node> <node id="tf_ZBTB11"> <data key="type">tf</data> <data key="label">ZBTB11</data> </node> <node id="tf_GATAD2B"> <data key="type">tf</data> <data key="label">GATAD2B</data> </node> <node id="tf_HMGA1"> <data key="type">tf</data> <data key="label">HMGA1</data> </node> <node id="tf_ZNF512B"> <data key="type">tf</data> <data key="label">ZNF512B</data> </node> <node id="tf_ZNF580"> <data key="type">tf</data> <data key="label">ZNF580</data> </node> <node id="tf_ZSCAN22"> <data key="type">tf</data> <data key="label">ZSCAN22</data> </node> <node id="tf_HOXB7"> <data key="type">tf</data> <data key="label">HOXB7</data> </node> <node id="tf_PAWR"> <data key="type">tf</data> <data key="label">PAWR</data> </node> <node id="tf_LYAR"> <data key="type">tf</data> <data key="label">LYAR</data> </node> <node id="tf_MYC"> <data key="type">tf</data> <data key="label">MYC</data> </node> <node id="tf_GTF2I"> <data key="type">tf</data> <data key="label">GTF2I</data> </node> <node id="tf_ESRRA"> <data key="type">tf</data> <data key="label">ESRRA</data> </node> <node id="tf_IRF3"> <data key="type">tf</data> <data key="label">IRF3</data> </node> <node id="tf_HOXA1"> <data key="type">tf</data> <data key="label">HOXA1</data> </node> <node id="tf_SOX4"> <data key="type">tf</data> <data key="label">SOX4</data> </node> <node id="tf_CEBPG"> <data key="type">tf</data> <data key="label">CEBPG</data> </node> <node id="tf_E2F1"> <data key="type">tf</data> <data key="label">E2F1</data> </node> <node id="tf_THAP1"> <data key="type">tf</data> <data key="label">THAP1</data> </node> <node id="tf_NCOR1"> <data key="type">tf</data> <data key="label">NCOR1</data> </node> <node id="tf_TFAM"> <data key="type">tf</data> <data key="label">TFAM</data> </node> <node id="tf_ZNF584"> <data key="type">tf</data> <data key="label">ZNF584</data> </node> <node id="tf_SOX15"> <data key="type">tf</data> <data key="label">SOX15</data> </node> <node id="tf_SIX2"> <data key="type">tf</data> <data key="label">SIX2</data> </node> <node id="tf_GATAD2A"> <data key="type">tf</data> <data key="label">GATAD2A</data> </node> <node id="tf_TFE3"> <data key="type">tf</data> <data key="label">TFE3</data> </node> <node id="tf_ZNF687"> <data key="type">tf</data> <data key="label">ZNF687</data> </node> <node id="tf_TEAD1"> <data key="type">tf</data> <data key="label">TEAD1</data> </node> <node id="tf_SP2"> <data key="type">tf</data> <data key="label">SP2</data> </node> <node id="tf_ETV5"> <data key="type">tf</data> <data key="label">ETV5</data> </node> <node id="tf_SNAI2"> <data key="type">tf</data> <data key="label">SNAI2</data> </node> <node id="tf_MLL4"> <data key="type">tf</data> <data key="label">MLL4</data> </node> <node id="tf_NONO"> <data key="type">tf</data> <data key="label">NONO</data> </node> <node id="tf_ZNF726"> <data key="type">tf</data> <data key="label">ZNF726</data> </node> <node id="tf_NFE2L1"> <data key="type">tf</data> <data key="label">NFE2L1</data> </node> <node id="tf_MLLT1"> <data key="type">tf</data> <data key="label">MLLT1</data> </node> <node id="tf_ZNF219"> <data key="type">tf</data> <data key="label">ZNF219</data> </node> <node id="tf_UNK"> <data key="type">tf</data> <data key="label">UNK</data> </node> <node id="tf_SFPQ"> <data key="type">tf</data> <data key="label">SFPQ</data> </node> <node id="tf_E2F7"> <data key="type">tf</data> <data key="label">E2F7</data> </node> <node id="tf_BRCA1"> <data key="type">tf</data> <data key="label">BRCA1</data> </node> <node id="tf_E2F3"> <data key="type">tf</data> <data key="label">E2F3</data> </node> <node id="tf_GATA2"> <data key="type">tf</data> <data key="label">GATA2</data> </node> <node id="tf_ELK1"> <data key="type">tf</data> <data key="label">ELK1</data> </node> <node id="tf_PHTF2"> <data key="type">tf</data> <data key="label">PHTF2</data> </node> <node id="tf_LASS6"> <data key="type">tf</data> <data key="label">LASS6</data> </node> <node id="tf_MECP2"> <data key="type">tf</data> <data key="label">MECP2</data> </node> <node id="tf_HOXB6"> <data key="type">tf</data> <data key="label">HOXB6</data> </node> <node id="tf_ZNF623"> <data key="type">tf</data> <data key="label">ZNF623</data> </node> <node id="tf_MYNN"> <data key="type">tf</data> <data key="label">MYNN</data> </node> <node id="tf_AEBP2"> <data key="type">tf</data> <data key="label">AEBP2</data> </node> <node id="tf_MXD3"> <data key="type">tf</data> <data key="label">MXD3</data> </node> <node id="tf_ETV4"> <data key="type">tf</data> <data key="label">ETV4</data> </node> <node id="tf_CSDA"> <data key="type">tf</data> <data key="label">CSDA</data> </node> <node id="tf_CTCF"> <data key="type">tf</data> <data key="label">CTCF</data> </node> <node id="tf_FOSL1"> <data key="type">tf</data> <data key="label">FOSL1</data> </node> <node id="tf_MTA3"> <data key="type">tf</data> <data key="label">MTA3</data> </node> <node id="tf_KCMF1"> <data key="type">tf</data> <data key="label">KCMF1</data> </node> <node id="tf_FOXK2"> <data key="type">tf</data> <data key="label">FOXK2</data> </node> <node id="tf_RBAK"> <data key="type">tf</data> <data key="label">RBAK</data> </node> <node id="tf_NFYB"> <data key="type">tf</data> <data key="label">NFYB</data> </node> <node id="tf_DNMT1"> <data key="type">tf</data> <data key="label">DNMT1</data> </node> <node id="tf_HES1"> <data key="type">tf</data> <data key="label">HES1</data> </node> <node id="tf_SRF"> <data key="type">tf</data> <data key="label">SRF</data> </node> <node id="tf_MAZ"> <data key="type">tf</data> <data key="label">MAZ</data> </node> <node id="tf_ZNF593"> <data key="type">tf</data> <data key="label">ZNF593</data> </node> <node id="tf_HMGXB4"> <data key="type">tf</data> <data key="label">HMGXB4</data> </node> <node id="tf_ZNF296"> <data key="type">tf</data> <data key="label">ZNF296</data> </node> <node id="tf_HIST2H2AC"> <data key="type">tf</data> <data key="label">HIST2H2AC</data> </node> <node id="tf_NFIX"> <data key="type">tf</data> <data key="label">NFIX</data> </node> <node id="tf_RUNX1"> <data key="type">tf</data> <data key="label">RUNX1</data> </node> <node id="tf_ZNF629"> <data key="type">tf</data> <data key="label">ZNF629</data> </node> <node id="tf_PAX6"> <data key="type">tf</data> <data key="label">PAX6</data> </node> <node id="tf_DLX2"> <data key="type">tf</data> <data key="label">DLX2</data> </node> <node id="tf_NFXL1"> <data key="type">tf</data> <data key="label">NFXL1</data> </node> <node id="tf_TP63"> <data key="type">tf</data> <data key="label">TP63</data> </node> <node id="tf_DDB2"> <data key="type">tf</data> <data key="label">DDB2</data> </node> <node id="tf_TBX20"> <data key="type">tf</data> <data key="label">TBX20</data> </node> <node id="tf_TCF19"> <data key="type">tf</data> <data key="label">TCF19</data> </node> <node id="tf_ZNF358"> <data key="type">tf</data> <data key="label">ZNF358</data> </node> <node id="tf_HSF1"> <data key="type">tf</data> <data key="label">HSF1</data> </node> <node id="tf_C14ORF106"> <data key="type">tf</data> <data key="label">C14ORF106</data> </node> <node id="tf_GMEB2"> <data key="type">tf</data> <data key="label">GMEB2</data> </node> <node id="tf_ZNF280D"> <data key="type">tf</data> <data key="label">ZNF280D</data> </node> <node id="tf_TEF"> <data key="type">tf</data> <data key="label">TEF</data> </node> <node id="tf_FUBP1"> <data key="type">tf</data> <data key="label">FUBP1</data> </node> <node id="tf_NFYA"> <data key="type">tf</data> <data key="label">NFYA</data> </node> <node id="tf_SMARCA1"> <data key="type">tf</data> <data key="label">SMARCA1</data> </node> <node id="tf_STIL"> <data key="type">tf</data> <data key="label">STIL</data> </node> <node id="tf_HNRNPK"> <data key="type">tf</data> <data key="label">HNRNPK</data> </node> <node id="tf_ELF1"> <data key="type">tf</data> <data key="label">ELF1</data> </node> <node id="tf_TOX2"> <data key="type">tf</data> <data key="label">TOX2</data> </node> <node id="tf_GRHL2"> <data key="type">tf</data> <data key="label">GRHL2</data> </node> <node id="tf_ZBTB44"> <data key="type">tf</data> <data key="label">ZBTB44</data> </node> <node id="tf_NR2F2"> <data key="type">tf</data> <data key="label">NR2F2</data> </node> <node id="tf_TFDP1"> <data key="type">tf</data> <data key="label">TFDP1</data> </node> <node id="tf_ZNF268"> <data key="type">tf</data> <data key="label">ZNF268</data> </node> <node id="tf_TFAP2A"> <data key="type">tf</data> <data key="label">TFAP2A</data> </node> <node id="tf_PBX1"> <data key="type">tf</data> <data key="label">PBX1</data> </node> <node id="tf_TFAP4"> <data key="type">tf</data> <data key="label">TFAP4</data> </node> <node id="tf_MXI1"> <data key="type">tf</data> <data key="label">MXI1</data> </node> <node id="tf_TEAD4"> <data key="type">tf</data> <data key="label">TEAD4</data> </node> <node id="tf_ERF"> <data key="type">tf</data> <data key="label">ERF</data> </node> <node id="tf_BBX"> <data key="type">tf</data> <data key="label">BBX</data> </node> <node id="tf_ZNF644"> <data key="type">tf</data> <data key="label">ZNF644</data> </node> <node id="tf_RBPJ"> <data key="type">tf</data> <data key="label">RBPJ</data> </node> <node id="tf_ZNF507"> <data key="type">tf</data> <data key="label">ZNF507</data> </node> <node id="tf_FOXM1"> <data key="type">tf</data> <data key="label">FOXM1</data> </node> <node id="tf_PLAGL1"> <data key="type">tf</data> <data key="label">PLAGL1</data> </node> <node id="tf_BNC1"> <data key="type">tf</data> <data key="label">BNC1</data> </node> <node id="tf_ADNP"> <data key="type">tf</data> <data key="label">ADNP</data> </node> <node id="tf_ZNF26"> <data key="type">tf</data> <data key="label">ZNF26</data> </node> <node id="tf_ANKZF1"> <data key="type">tf</data> <data key="label">ANKZF1</data> </node> <node id="tf_NFKBIL2"> <data key="type">tf</data> <data key="label">NFKBIL2</data> </node> <node id="tf_ZNF451"> <data key="type">tf</data> <data key="label">ZNF451</data> </node> <node id="tf_E2F4"> <data key="type">tf</data> <data key="label">E2F4</data> </node> <node id="tf_FOXA1"> <data key="type">tf</data> <data key="label">FOXA1</data> </node> <node id="tf_GON4L"> <data key="type">tf</data> <data key="label">GON4L</data> </node> <node id="tf_ZNF828"> <data key="type">tf</data> <data key="label">ZNF828</data> </node> <node id="tf_BCL11A"> <data key="type">tf</data> <data key="label">BCL11A</data> </node> <node id="tf_CREB1"> <data key="type">tf</data> <data key="label">CREB1</data> </node> <node id="tf_ARNTL2"> <data key="type">tf</data> <data key="label">ARNTL2</data> </node> <node id="tf_RXRB"> <data key="type">tf</data> <data key="label">RXRB</data> </node> <node id="motif_ADNP_IRX_SIX_ZHX"> <data key="type">motif</data> <data key="label">ADNP_IRX_SIX_ZHX</data> </node> <node id="motif_TEF"> <data key="type">motif</data> <data key="label">TEF</data> </node> <node id="motif_FOXQ1"> <data key="type">motif</data> <data key="label">FOXQ1</data> </node> <node id="motif_TEAD1"> <data key="type">motif</data> <data key="label">TEAD1</data> </node> <node id="motif_SNAI1..3"> <data key="type">motif</data> <data key="label">SNAI1..3</data> </node> <node id="motif_NFY{A,B,C}"> <data key="type">motif</data> <data key="label">NFY{A,B,C}</data> </node> <node id="motif_E2F1..5"> <data key="type">motif</data> <data key="label">E2F1..5</data> </node> <node id="motif_CDC5L"> <data key="type">motif</data> <data key="label">CDC5L</data> </node> <node id="motif_RBPJ"> <data key="type">motif</data> <data key="label">RBPJ</data> </node> <node id="motif_bHLH_family"> <data key="type">motif</data> <data key="label">bHLH_family</data> </node> <node id="motif_POU2F1..3"> <data key="type">motif</data> <data key="label">POU2F1..3</data> </node> <node id="motif_TFDP1"> <data key="type">motif</data> <data key="label">TFDP1</data> </node> <node id="motif_ZNF143"> <data key="type">motif</data> <data key="label">ZNF143</data> </node> <node id="motif_TP53"> <data key="type">motif</data> <data key="label">TP53</data> </node> </graph> </graphml>';
var z_min = 0;
var z_max = 1;
var t;
var selected = false;
function sliderTrack() {
z_min = $('#slider1').noUiSlider('getValue', {point: 'lower'});
z_max = $('#slider1').noUiSlider('getValue', {point: 'upper'});
z_min = Math.round(z_min*100)/100;
z_max = Math.round(z_max*100)/100;
$("#cyto_zscore_filter_min").val(z_min);
$("#cyto_zscore_filter_max").val(z_max);
//clearTimeout(t);
//t = setTimeout("setScoreFilter()", 100);
}
function sliderChange() {
sliderTrack();
setScoreFilter();
}
function setScoreFilter() {
vis.filter("edges", function(edge) {
return ((edge.data.zscore >= z_min)&&(edge.data.zscore <= z_max));
}, true);
}
function graphClick(event) {
var target = event.target;
var lurl = "https://fantom5-collaboration.gsc.riken.jp/resource_browser/RB_SearchResults?sq="+target.data["id"];
//window.location = lurl;
alert(lurl);
}
function graphSelect() {
var edges = vis.selected("edges");
var nodes = vis.selected("nodes");
//var container = document.getElementById("TF_list");
var html = "<tr><th>TF</th><th>Motif</th></tr>";
//var sel = vis.selected();
for (var i in nodes) {
var data = nodes[i].data;
html += "<tr><td>"+data.id+"</td><td>"+data.motif+"</td></tr>";
}
//($("#nodes_list").innerHTML);
$("#nodes_list").html(html);
html = "<tr><th>Source TF</th><th>Target TF</th><th>Promoter</th><th>Z-Score</th></tr>";
//var sel = vis.selected();
for (var i in edges) {
var data = edges[i].data;
html += "<tr><td>"+data.source+"</td><td>"+data.target+"</td><td>"+data.promoter+"</td><td>"+data.zscore+"</td></tr>";
}
$("#edges_list").html(html);
selected = ((edges.length > 0) || (nodes.length > 0));
vis.visualStyle(visual_style);
//if ((edges.length > 0) && (nodes.length > 0)) {
// selected = true;
//}
}
function layoutChange() {
vis.layout($("#cyto_layout").val());
}
$("#cyto_layout").change(function(){
layoutChange();
return false;
});
$("#cyto_recalc").click(function(){
layoutChange();
return false;
});
// id of Cytoscape Web container div
var div_id = "cytoscapeweb";
var colorMapper = {
attrName: "type",
entries: [ { attrValue: "motif", value: "#ff9900" },
  { attrValue: "tf", value: "#0099ff" } ]
};
var edgeColorMapper = {
attrName: "type",
entries: [ { attrValue: "has_motif", value: "#ff9900" }, { attrValue: "promotes", value: "#0099ff" } ]
};
var edgeArrowMapper = {
attrName: "type",
entries: [ { attrValue: "has_motif", value: "T" }, { attrValue: "promotes", value: "delta" } ]
};
// visual style we will use
var visual_style = {
global: {
backgroundColor: "#ffffff",
opacity: 0.1,
tooltipDelay: 10
},
nodes: {
//label: { passthroughMapper: { attrName: "id" } },
tooltipText: "<b>${type}: ${label}</b>",
shape: "ellipse",
borderWidth: 1,
borderColor: "#000000",
size: 30,
//color: "#ff9900",
color: { defaultValue: "#ff9900", discreteMapper: colorMapper },
//opacity: 0.8,
opacity: { customMapper: { functionName: "customOpacity" } },
selectionOpacity: 0.8,
hoverOpacity: 0.8,
labelHorizontalAnchor: "center"
},
edges: {
width: { passthroughMapper: { attrName: "zscore" } },
label: { passthroughMapper: { attrName: "promoter" } },
tooltipText: "<b>Promoter: ${promoter}</b><br />Z-Score: ${zscore}",
//color: "#011e59",
color: { defaultValue: "#011e59", discreteMapper: edgeColorMapper },
targetArrowShape: { defaultValue: "delta", discreteMapper: edgeArrowMapper },
sourceArrowShape: "",
labelGlowOpacity: 0.8,
//opacity: 0.8,
opacity: { customMapper: { functionName: "customOpacity" } },
selectionOpacity: 0.8,
hoverOpacity: 0.8,
labelGlowColor: "#000000"
}
};
// initialization options
var options = {
swfPath: "swf/CytoscapeWeb",
flashInstallerPath: "swf/playerProductInstall"
};
                  
                  
                // you could also use other formats (e.g. GraphML) or grab the network data via AJAX
            var vis = new org.cytoscapeweb.Visualization(div_id, options);
 
                //var sif = 'node1 typeA node2 node3 node4 node5\nnode2 typeB node6';
vis["customOpacity"] = function (data) {
return (selected) ? 0.3 : 0.6;
};
                  
                  
                // initialization options
            // callback when Cytoscape Web has finished drawing
                var options = {
vis.ready(function() {
                    // where you have the Cytoscape Web SWF
                    swfPath: "/resource_browser/rb_js/cytoscapeweb/swf/CytoscapeWeb",
// add a listener for when nodes and edges are clicked
                    // where you have the Flash installer SWF
vis.addListener("dblclick", "nodes", graphClick)
                    flashInstallerPath: "/resource_browser/rb_js/cytoscapeweb/swf/playerProductInstall"
.addListener("dblclick", "edges", graphClick)
                };
.addListener("select", "", graphSelect)
 
.addListener("deselect", "", graphSelect);
                // visual options
                var visual_style = {
                    global: {
                        backgroundColor: "#ffffff",
opacity: 0.1,
tooltipDelay: 10
                    },
                    nodes: {
label: { passthroughMapper: { attrName: "id" } },
tf: { passthroughMapper: { attrName: "id" } },
tooltipText: "<b>${id}</b><br />${motif}",
                        shape: "ellipse",
                        borderWidth: 1,
                        borderColor: "#000000",
                        size: 40,
                        color: "#0099ff",
opacity: 0.4,
                        labelHorizontalAnchor: "center"
                    },
                    edges: {
                        width: { passthroughMapper: { attrName: "zscore" } },
label: { passthroughMapper: { attrName: "id" } },
tooltipText: { passthroughMapper: { attrName: "id" } },
tooltipText: "<b>${id}</b><br />${zscore}",
                        color: "#011e59",
targetArrowShape: "delta",
sourceArrowShape: "",
labelGlowOpacity: 0.8,
labelGlowColor: "#000000"
                    }
                };


                // draw options
var edges = vis.edges();
                var draw_options = {
                    // your data goes here
                    network: xml,
    visualStyle: visual_style,
    nodeTooltipsEnabled: true,
    edgeTooltipsEnabled: true,
                    panZoomControlVisible: true
                };


                // init and draw
for (var i in edges) {
                var vis = new org.cytoscapeweb.Visualization(div_id, options);
var data = edges[i].data;
if (z_max < data.zscore) { z_max = data.zscore; }
}
z_max = Math.ceil(z_max);
z_min = Math.floor(z_min);
$(".sliderbar").noUiSlider("init", { scale: [z_min, z_max], startMin: z_min, startMax: z_max, tracker: sliderTrack, change: sliderChange });
$("#cyto_zscore_filter_min").val(z_min);
$("#cyto_zscore_filter_max").val(z_max);
$("#cyto_zscore_min").html(z_min);
$("#cyto_zscore_max").html(z_max);
graphSelect();  // Empty
});


                // callback when Cytoscape Web has finished drawing
// draw options
                vis.ready(function() {
var draw_options = {
// your data goes here
network: xml,
visualStyle: visual_style,
nodeTooltipsEnabled: true,
edgeTooltipsEnabled: true,
layout: { name: "ForceDirected", autoStabilize: true, maxTime: 120000, weightAttr: "zscore", weightNorm: "log", gravitation: -500 },
// hide pan zoom
panZoomControlVisible: true
};
                  
                  
                    // add a listener for when nodes and edges are clicked
            vis.draw(draw_options);
                    vis.addListener("dblclick", "nodes", function(event) {
        });
                        handle_click(event);
                    })
                    .addListener("dblclick", "edges", function(event) {
                        handle_click(event);
                    });
                   
                    function handle_click(event) {
                        var target = event.target;
var lurl = "https://fantom5-collaboration.gsc.riken.jp/resource_browser/RB_SearchResults?sq="+target.data["id"];
window.location = lurl;
                    }
                   
                });


                vis.draw(draw_options);
            };
         </script>
         </script>
          
          


</html>
</html>

Revision as of 14:07, 25 April 2012

FF:10563-108A5

Cytoscape Web will replace the contents of this div with your graph.

TF to TF network. Motif is an attribute of the source TF node. Promoter is an attribute of the TF to TF edge.

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