FFCP PHASE1:Hg19::chr18:7117785..7117811,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:7117785..7117811,- to FFCP PHASE1:Hg19::chr18:7117785..7117811,-: NSchange) |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|EntrezGene=284217 | |EntrezGene=284217 | ||
|HGNC=6481 | |HGNC=6481 | ||
|UniProt=P25391 | |UniProt=P25391 | ||
|association_with_transcript=1bp_to_ENST00000389658,NM_005559,uc002knm.2,uc010wzj.1_5end | |||
|description=CAGE_peak_1_at_LAMA1_5end | |||
|id=chr18:7117785..7117811,- | |||
|ontology_enrichment_celltype=CL:0000055!1.47e-13!180;CL:0000147!2.27e-08!14;CL:0000133!2.01e-07!59 | |||
|phase1_expression=5.08699461957559,1.49870366723688,1.26858963686374,3.00219895059391,0.893922188854576,0,0,1.26343974685366,0.261185628199839,0,0,0,0,2.35156070624089,2.65117900582333,0,0,0,0,1.10808952269109,0.204000691244253,2.19418305034661,8.30084362680065,5.33810257784248,6.15158934014534,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,10.0605128955545,19.6908345239037,0.361439152384566,0,0.434539556882471,0.795285947051099,0.486634870302636,0.850813354476611,0.665188192387692,1.84453049955565,7.33482822787191,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,1.49091585508596,0,4.8991396900891,0.573673241497627,0.709336764396714,2.24271040056923,0,0.49333509683432,15.5605517699883,3.63718814588158,10.9519475086017,17.1033893238772,5.18558332031999,1.64025002283658,11.2377627658915,2.2818872861778,4.18456305545043,0.23486899728753,0,0.421352420106746,2.44985005505872,0.982674538494144,3.30642499762449,0,5.43987244412825,0,0,0.505008341862199,0.875829639103749,0.554128230968366,0.438977620880838,0,18.1788051276982,6.4656344401212,0,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0.744467425326359,0,0,0,0,1.61646056818812,0,0.10075209822764,0.508681776931463,0.193260853163297,6.2731607735892,2.86804595389004,7.68434348616451,10.7349112340403,10.4574548582567,13.7869203170443,5.55105871926382,9.12443397689575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9388881359768,5.88034845542168,0,0,0.590789906681404,0,0,7.20584803253807,2.41450627898976,0,0.100528972411631,0.740707561268237,3.58389135841357,0,0,5.79652024875384,16.3198084987792,0,0,0,0,0,0,0,0,0,6.55130299975552,0.141775097242386,9.85143749731331,2.90633938513962,14.568541808278,0,0,0,0,0.12624243342638,1.96843472305724,10.6956759156318,5.86087236050235,8.55362230113526,14.7043314565753,53.7614073540612,10.2897515747008,10.9888462658453,48.8275277093274,8.9472708701559,29.7324946242889,0,10.988935783228,26.3278735419022,18.7213386440459,0,0,0.532844358032199,1.00084595560703,0,1.64648067356154,5.5375151329935,0.710783897485092,0.791951872933429,0.904318131178758,0.871533458600294,2.39935178836937,0,0,0,0.718874566474748,0,1.42636905040718,6.37037749337349,2.26023954805422,4.1184021545176,0,0,0,0,3.55732473911449,2.60279707715243,0.773288812777695,3.68535783735567,5.10351001322531,0,0,0,0.981531933753119,1.50051156317903,1.62759014219841,0.207970861530807,0,0.473107245101804,0.234282829985426,1.80567659836631,4.5481500811197,4.1389228517002,0.664225598535437,0.368738337083406,1.30325421702124,0.587403472388222,1.37257369524342,0,0,0,0,0,0,4.21783273291921,3.52962538562544,2.80660094433074,6.53509661204075,2.55853624533352,6.91671860917512,7.42090332224955,3.23840356985577,1.9531789784444,0.98552587216571,3.63478100428535,1.85936605535935,0,4.0101294060657,2.5782676902051,0.229628896329213,3.64182336013434,7.47409165268718,9.02399225814824,7.08541101360616,6.27479815341484,5.84556898613043,7.07195913582267,0,0.170093705276516,0,0,0.270946437543853,2.00675909541941,1.27438136522519,3.3243040357149,0.671624264166535,0,0,2.82095137628028,16.4007322849853,5.20605431462885,0.515205058238611,0,0,0,0,0,0.580024309752732,7.08623638727364,5.67963596486679,3.99726060205139,3.75970857038958,3.62541734785571,5.53973078204656,0.979352392114111,0,0,0,0,0,4.7221852024596,0,0,1.06461206063404,0,0,0,14.1420180356674,20.2482831819985,16.9660872592204,2.303080121802,1.71175595213568,0,0,9.17349533674905,7.68703683260953,6.00843251963001,3.43710218674637,0,5.05510147486777,0.48763373908959,1.21856744815642,0,5.59649636772742,3.11091950298168,1.13008116620243,0,0,0.438450885253763,3.47265320560013,2.62357900818653,2.23201414658974,0,0,1.29070216983646,0.294747123039363,2.49669736036875,6.03093808920016,1.68886108238131,0,2.27683904259429,10.4980416073495,0.0962221127255121,0,0,1.22386941009813,1.29151611801369,0,1.33029046061003,7.12142540641574,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,2.98244294329889,1.1253553312841,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0,0,0,0,1.67693789582787,0,0,3.87733098438087,1.48428957058962,3.99227596002388,0,0,1.44999915086959,0.455173793141999,0,0,0.344743373241465,0,0,4.42870692906919,3.37670028151142,0,1.54810963903714,1.18219047581419,1.09692698576986,0,0.139423744278603,0.692552326534174,0,147.791462712747,81.5896987684829,158.733810378054,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,1.48260564340311,1.23563938946503,1.98401704060365,5.8638985693189,0,3.74823113160543,0,0.586993856796269,0,1.18375320854817,8.46935012340647,4.28501866282686,0.189559738885464,0.450970258243478,0.829505531177977,0,0,0,0,11.9536009332513,0,0,0,0,1.39781334593624,0,0.967563312890852,0.803982487948041,0.574808199372465,0,0,1.12990370390266,1.37041924646751,1.19228767021794,2.089256266544,0,0.0801588202515337,0.213452994739353,0,0,0,1.37275998289572,0,0.124252535565433,1.88555227693436,0.815425236441684,0.418411385249333,0,0,4.20294202096853,2.19048606227189,0,7.73577794555923,0,0,0,2.87149209830726,0.199679000498991,0,0.446342914883745,0.134366944973453,6.12509802022086,34.9487848582361,0,0,0,13.1892825229763,0,3.18091875923721,5.0395260261283,7.87690427478594,7.28959013965339,6.64704540846696,0.2249738915515,0,2.12623448303086,1.67717343799633,4.57073102335349,30.1613881776239,0,94.6637151677421,1.53532157855556,0,0,7.62805612964249,3.80099721227599,0.864221491201268,3.26587360109409,19.156830649998,0,0.340776043570843,0,0,0,3.87848869084652,4.49590845925146,0,0,0.320362237703084,0.314408610199332,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,2.65820453990096,2.19647276823534,0.876336514945499,5.73409195690071,4.21530395840039,4.34674820589684,24.3493597487766,22.4964734331792,33.2111567416209,77.0756400571412,0,0,0,0.74627401443437,17.9959248582363,12.2057289530575,3.59865710022669,2.0125432140206,0.889811221596536,10.7554832146554,24.9531024209344,1.39893480524502,2.95710299979268,11.3100704686229,26.9881867298163,15.0605068169972,24.4676662626105,20.7356537355236,3.65221543268214,12.6216391557663,4.56966254602554,6.91680246447925,17.0937739650406,9.55953957678147,68.6769964620171,10.7485889948626,0,0,0.336749488765919,1.26184898228651,1.73357847366573,5.78992296712299,2.08795433572169,7.02788369088044,0.231522474323834,0,0.537266523244462,3.70561736593167,0,9.89459217296934,10.6102721049003,6.25087030416369,3.07489822305536,16.5806564030975,10.331238510031,1.65910123382077,0,0,0,2.94848863961771,0,0,0,0,0,0.567515953566836,0,0.839277046316667,8.70908164046162,0.383683113910955,1.40172254815686,3.77438260454151,0,0,0.212574920101683,0.247871528518004,0,1.90802610392051,0,0,9.87492642333915,0,2.95454435443714,2.8339315265117,2.07524016774297,1.43581454968528,6.55386410176467,1.24483054435592,2.09918339321406,0,0,13.8024576316856,0,0,0,11.0457588169616,0,1.80504788038217,1.21023041222112,0,70.1909941210212,2.62035068016155,0,1.89105236931505,2.34323429584154,1.03343398250592,0.951237152908602,4.37579847214576,1.09651553371436,0.496211178389294,0,0,2.14280734351315,1.00885116665647,2.42786241694653,3.87025725297206,0.354809480650555,0,0,2.85472878502693,1.05236437700559,4.01859059005492,0,0.156986185701028,4.39923651764805,0,0.913158720509496,0.647782773655864,1.43325506366115,0.428859265059938,5.05643557544725,33.7100133567563,1.91244099532837,0.801711364730253,12.2257536856192,2.0486217251274,1.38251932362818,2.15113679410139,8.40157205187014,7.75441983308335,1.69354820076372,0.4582137370881,0,0,0.447421727191169,0,0,0,0.307988420568741,2.3196288626764,0.485710993059139,0.467878926924211,0,0.594600453887843,1.35535298446752,7.58589565543461,0,0.0771741581079447,0,0,0.490296643507811,0,7.45972175036792,5.94092800654172,13.9476390102522,2.0391253762538,0.375935671919414,0.644578879735772,0,0.178553938605658,1.05868461514708,0,0,2.2936464170227,3.72682916193773,9.62406529378426,1.8357702351547,3.05445483238264,2.645134202577,0.743990036333503,0.924351257262837,0,6.30832124175395,3.16870158694717,1.77377901416012,9.89291648497223,4.54269588951453,12.3139165376692,2.005660314339,11.063689939863,19.2934173712448,4.1458471972939,4.55105181792339,0.213233981900981,0.476128862927481,0,0.434523000071005,0.448527450322454,2.73682780596109,1.21270313374932,0.435433495793923,0.342233301085281,0.336760265072938,1.2192774916755,3.99192427855216,11.3150543369255,5.5498219856412,3.8614456457388,0,0,0.855690109280065,2.03448089157869,4.66029741929859,0,0 | |phase1_expression=5.08699461957559,1.49870366723688,1.26858963686374,3.00219895059391,0.893922188854576,0,0,1.26343974685366,0.261185628199839,0,0,0,0,2.35156070624089,2.65117900582333,0,0,0,0,1.10808952269109,0.204000691244253,2.19418305034661,8.30084362680065,5.33810257784248,6.15158934014534,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,10.0605128955545,19.6908345239037,0.361439152384566,0,0.434539556882471,0.795285947051099,0.486634870302636,0.850813354476611,0.665188192387692,1.84453049955565,7.33482822787191,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,1.49091585508596,0,4.8991396900891,0.573673241497627,0.709336764396714,2.24271040056923,0,0.49333509683432,15.5605517699883,3.63718814588158,10.9519475086017,17.1033893238772,5.18558332031999,1.64025002283658,11.2377627658915,2.2818872861778,4.18456305545043,0.23486899728753,0,0.421352420106746,2.44985005505872,0.982674538494144,3.30642499762449,0,5.43987244412825,0,0,0.505008341862199,0.875829639103749,0.554128230968366,0.438977620880838,0,18.1788051276982,6.4656344401212,0,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0.744467425326359,0,0,0,0,1.61646056818812,0,0.10075209822764,0.508681776931463,0.193260853163297,6.2731607735892,2.86804595389004,7.68434348616451,10.7349112340403,10.4574548582567,13.7869203170443,5.55105871926382,9.12443397689575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9388881359768,5.88034845542168,0,0,0.590789906681404,0,0,7.20584803253807,2.41450627898976,0,0.100528972411631,0.740707561268237,3.58389135841357,0,0,5.79652024875384,16.3198084987792,0,0,0,0,0,0,0,0,0,6.55130299975552,0.141775097242386,9.85143749731331,2.90633938513962,14.568541808278,0,0,0,0,0.12624243342638,1.96843472305724,10.6956759156318,5.86087236050235,8.55362230113526,14.7043314565753,53.7614073540612,10.2897515747008,10.9888462658453,48.8275277093274,8.9472708701559,29.7324946242889,0,10.988935783228,26.3278735419022,18.7213386440459,0,0,0.532844358032199,1.00084595560703,0,1.64648067356154,5.5375151329935,0.710783897485092,0.791951872933429,0.904318131178758,0.871533458600294,2.39935178836937,0,0,0,0.718874566474748,0,1.42636905040718,6.37037749337349,2.26023954805422,4.1184021545176,0,0,0,0,3.55732473911449,2.60279707715243,0.773288812777695,3.68535783735567,5.10351001322531,0,0,0,0.981531933753119,1.50051156317903,1.62759014219841,0.207970861530807,0,0.473107245101804,0.234282829985426,1.80567659836631,4.5481500811197,4.1389228517002,0.664225598535437,0.368738337083406,1.30325421702124,0.587403472388222,1.37257369524342,0,0,0,0,0,0,4.21783273291921,3.52962538562544,2.80660094433074,6.53509661204075,2.55853624533352,6.91671860917512,7.42090332224955,3.23840356985577,1.9531789784444,0.98552587216571,3.63478100428535,1.85936605535935,0,4.0101294060657,2.5782676902051,0.229628896329213,3.64182336013434,7.47409165268718,9.02399225814824,7.08541101360616,6.27479815341484,5.84556898613043,7.07195913582267,0,0.170093705276516,0,0,0.270946437543853,2.00675909541941,1.27438136522519,3.3243040357149,0.671624264166535,0,0,2.82095137628028,16.4007322849853,5.20605431462885,0.515205058238611,0,0,0,0,0,0.580024309752732,7.08623638727364,5.67963596486679,3.99726060205139,3.75970857038958,3.62541734785571,5.53973078204656,0.979352392114111,0,0,0,0,0,4.7221852024596,0,0,1.06461206063404,0,0,0,14.1420180356674,20.2482831819985,16.9660872592204,2.303080121802,1.71175595213568,0,0,9.17349533674905,7.68703683260953,6.00843251963001,3.43710218674637,0,5.05510147486777,0.48763373908959,1.21856744815642,0,5.59649636772742,3.11091950298168,1.13008116620243,0,0,0.438450885253763,3.47265320560013,2.62357900818653,2.23201414658974,0,0,1.29070216983646,0.294747123039363,2.49669736036875,6.03093808920016,1.68886108238131,0,2.27683904259429,10.4980416073495,0.0962221127255121,0,0,1.22386941009813,1.29151611801369,0,1.33029046061003,7.12142540641574,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,2.98244294329889,1.1253553312841,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0,0,0,0,1.67693789582787,0,0,3.87733098438087,1.48428957058962,3.99227596002388,0,0,1.44999915086959,0.455173793141999,0,0,0.344743373241465,0,0,4.42870692906919,3.37670028151142,0,1.54810963903714,1.18219047581419,1.09692698576986,0,0.139423744278603,0.692552326534174,0,147.791462712747,81.5896987684829,158.733810378054,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,1.48260564340311,1.23563938946503,1.98401704060365,5.8638985693189,0,3.74823113160543,0,0.586993856796269,0,1.18375320854817,8.46935012340647,4.28501866282686,0.189559738885464,0.450970258243478,0.829505531177977,0,0,0,0,11.9536009332513,0,0,0,0,1.39781334593624,0,0.967563312890852,0.803982487948041,0.574808199372465,0,0,1.12990370390266,1.37041924646751,1.19228767021794,2.089256266544,0,0.0801588202515337,0.213452994739353,0,0,0,1.37275998289572,0,0.124252535565433,1.88555227693436,0.815425236441684,0.418411385249333,0,0,4.20294202096853,2.19048606227189,0,7.73577794555923,0,0,0,2.87149209830726,0.199679000498991,0,0.446342914883745,0.134366944973453,6.12509802022086,34.9487848582361,0,0,0,13.1892825229763,0,3.18091875923721,5.0395260261283,7.87690427478594,7.28959013965339,6.64704540846696,0.2249738915515,0,2.12623448303086,1.67717343799633,4.57073102335349,30.1613881776239,0,94.6637151677421,1.53532157855556,0,0,7.62805612964249,3.80099721227599,0.864221491201268,3.26587360109409,19.156830649998,0,0.340776043570843,0,0,0,3.87848869084652,4.49590845925146,0,0,0.320362237703084,0.314408610199332,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,2.65820453990096,2.19647276823534,0.876336514945499,5.73409195690071,4.21530395840039,4.34674820589684,24.3493597487766,22.4964734331792,33.2111567416209,77.0756400571412,0,0,0,0.74627401443437,17.9959248582363,12.2057289530575,3.59865710022669,2.0125432140206,0.889811221596536,10.7554832146554,24.9531024209344,1.39893480524502,2.95710299979268,11.3100704686229,26.9881867298163,15.0605068169972,24.4676662626105,20.7356537355236,3.65221543268214,12.6216391557663,4.56966254602554,6.91680246447925,17.0937739650406,9.55953957678147,68.6769964620171,10.7485889948626,0,0,0.336749488765919,1.26184898228651,1.73357847366573,5.78992296712299,2.08795433572169,7.02788369088044,0.231522474323834,0,0.537266523244462,3.70561736593167,0,9.89459217296934,10.6102721049003,6.25087030416369,3.07489822305536,16.5806564030975,10.331238510031,1.65910123382077,0,0,0,2.94848863961771,0,0,0,0,0,0.567515953566836,0,0.839277046316667,8.70908164046162,0.383683113910955,1.40172254815686,3.77438260454151,0,0,0.212574920101683,0.247871528518004,0,1.90802610392051,0,0,9.87492642333915,0,2.95454435443714,2.8339315265117,2.07524016774297,1.43581454968528,6.55386410176467,1.24483054435592,2.09918339321406,0,0,13.8024576316856,0,0,0,11.0457588169616,0,1.80504788038217,1.21023041222112,0,70.1909941210212,2.62035068016155,0,1.89105236931505,2.34323429584154,1.03343398250592,0.951237152908602,4.37579847214576,1.09651553371436,0.496211178389294,0,0,2.14280734351315,1.00885116665647,2.42786241694653,3.87025725297206,0.354809480650555,0,0,2.85472878502693,1.05236437700559,4.01859059005492,0,0.156986185701028,4.39923651764805,0,0.913158720509496,0.647782773655864,1.43325506366115,0.428859265059938,5.05643557544725,33.7100133567563,1.91244099532837,0.801711364730253,12.2257536856192,2.0486217251274,1.38251932362818,2.15113679410139,8.40157205187014,7.75441983308335,1.69354820076372,0.4582137370881,0,0,0.447421727191169,0,0,0,0.307988420568741,2.3196288626764,0.485710993059139,0.467878926924211,0,0.594600453887843,1.35535298446752,7.58589565543461,0,0.0771741581079447,0,0,0.490296643507811,0,7.45972175036792,5.94092800654172,13.9476390102522,2.0391253762538,0.375935671919414,0.644578879735772,0,0.178553938605658,1.05868461514708,0,0,2.2936464170227,3.72682916193773,9.62406529378426,1.8357702351547,3.05445483238264,2.645134202577,0.743990036333503,0.924351257262837,0,6.30832124175395,3.16870158694717,1.77377901416012,9.89291648497223,4.54269588951453,12.3139165376692,2.005660314339,11.063689939863,19.2934173712448,4.1458471972939,4.55105181792339,0.213233981900981,0.476128862927481,0,0.434523000071005,0.448527450322454,2.73682780596109,1.21270313374932,0.435433495793923,0.342233301085281,0.336760265072938,1.2192774916755,3.99192427855216,11.3150543369255,5.5498219856412,3.8614456457388,0,0,0.855690109280065,2.03448089157869,4.66029741929859,0,0 | ||
|short_description=p1@LAMA1 | |||
}} | }} |
Revision as of 11:12, 20 April 2012
Short description: | p1@LAMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LAMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000389658, NM_005559, uc002knm.2, uc010wzj.1_5end |
EntrezGene: | LAMA1 |
HGNC: | 6481 |
UniProt: | P25391 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.