Personal tools

FFCP PHASE1:Mm9::chr3:95985101..95985156,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000540!2.00e-14!33;CL:0000047!2.00e-14!33;CL:0000031!2.00e-14!33;CL:0000404!2.00e-14!33;CL:0000117!2.71e-13!23;CL:0000337!2.71e-13!23;CL:0002319!2.94e-12!43;CL:0000221!3.07e-12!44;CL:0000133!3.07e-12!44;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39;CL:0000055!2.03e-08!50
|ontology_enrichment_celltype=CL:0000540!2.00e-14!33;CL:0000047!2.00e-14!33;CL:0000031!2.00e-14!33;CL:0000404!2.00e-14!33;CL:0000117!2.71e-13!23;CL:0000337!2.71e-13!23;CL:0002319!2.94e-12!43;CL:0000221!3.07e-12!44;CL:0000133!3.07e-12!44;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39;CL:0000055!2.03e-08!50
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001017!4.46e-31!73;UBERON:0005743!4.46e-31!73;UBERON:0000073!1.23e-29!75;UBERON:0001016!1.23e-29!75;UBERON:0002346!4.47e-27!71;UBERON:0003075!4.47e-27!71;UBERON:0007284!4.47e-27!71;UBERON:0004121!7.19e-25!102;UBERON:0000924!7.19e-25!102;UBERON:0006601!7.19e-25!102;UBERON:0000033!3.77e-24!63;UBERON:0001049!4.79e-24!52;UBERON:0005068!4.79e-24!52;UBERON:0006241!4.79e-24!52;UBERON:0007135!4.79e-24!52;UBERON:0000955!1.91e-23!50;UBERON:0006238!1.91e-23!50;UBERON:0002616!9.38e-23!49;UBERON:0003056!3.81e-21!49;UBERON:0003080!1.17e-18!40;UBERON:0002780!5.50e-18!39;UBERON:0001890!5.50e-18!39;UBERON:0006240!5.50e-18!39;UBERON:0002020!1.01e-17!34;UBERON:0002791!5.37e-15!29;UBERON:0003528!5.37e-15!29;UBERON:0001893!5.37e-15!29;UBERON:0007811!9.55e-15!86;UBERON:0000153!1.11e-12!94;UBERON:0000956!1.57e-10!21;UBERON:0001869!1.57e-10!21;UBERON:0000203!1.57e-10!21;UBERON:0002619!9.20e-09!17;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10;UBERON:0000025!3.59e-07!114
|phase1_expression=7.8472935081349,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,2.06597317506522,1.267098499365,3.27690336850791,1.02730780935303,2.71225340584144,2.22560948910567,5.33264454755884,0,1.61980213911861,0,1.41957974411207,1.23402990245165,0.42438965179803,56.2986580800082,8.14185799847259,11.4927907221132,0.799962113967033,0.91763712426868,0,0,0.646413698057667,0.190023419456374,0.504060259519861,0.443461021310609,5.08024538767705,1.84519436275371,0,0,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.62203089951223,2.20256102594018,3.12956537739216,4.36050312760893,3.29529274101708,3.30530828426282,2.09979632438044,7.18762821824858,0.671130424230945,3.62681071005672,1.68046899571232,0.771778308107841,0.85960031981627,0.515672092277442,103.990660881833,106.327186833679,115.357315438125,1.35537812827653,0,0.449949858640699,2.96659908770092,0,17.0772062995491,18.8266969607562,28.0998849355974,33.3464667679276,27.7628948983824,237.947270008368,193.922578955517,39.932000544075,29.4245596025986,51.4762520501612,461.385541387439,472.953900267535,436.088947914475,102.475645566361,92.7684706128434,76.5742654718437,396.16067558296,310.644960737487,319.653934349087,166.759779378096,163.44268955737,102.706094649741,0.757261933331841,2.26714680320357,0.869593466105033,0,0,1.07940638327563,0,0,11.5164424508037,0.681721290312231,0.519572009205738,1.41335829804136,6.4787973097273,8.98285341900225,17.8363667794652,0,0,0.253359865475099,0,12.6744106488157,0,7.71899123137089,5.55153045651635,7.00270600117925,6.22661842591358,5.72746034099966,5.40908052824242,3.51866455723091,0.494389935468748,2.89198713839823,0,1.29413479957927,0.441683036920787,2.90925151881133,3.72783522436244,195.284791606702,296.367090141039,0.766371165625774,1.31796636956512,0,0.508280908292259,309.916832928578,225.090296586764,84.314070267732,271.165939499951,238.071090774538,337.655572409285,282.462039000966,6.21220119486929,1.99051152976149,2.27450482590307,25.6739064181498,5.98554037628437,6.20735681970377,11.884100567153,13.7141384230501,23.6767017046621,24.725948014976,30.6404639310313,73.9891640313585,1.29340795759705,4.9167580843633,4.57472922826267,3.72632745126877,1.94633074457919,2.089512999133,1.23469281844766,9.15557627365069,0,0,0.284163499395593,23.6123380690472,20.1692411583743,14.4049649168812,16.5721314909647,17.3152523937715,13.5755059340893,18.3701816352822,16.6329508867764,11.4430035519826,13.3293478429919,9.35754545250843,7.78260571640215,7.74859933354261,7.90380415047782,7.51555945058082,196.200522010331,49.6000231668151,0.660837565967596,1.05780226665418,8.10495352033889,6.0381534683714,4.25262622362908,3.02525286935014,2.66853652613844,2.66315876557583,0.949058123089023,3.12928013975621,4.02136334080431,3.97912944082302,2.53453313254856,2.69645822596266,1.08069024937347,1.59313018603494,1.70701110857774,3.65595240351132,1.1270773567308,5.09128319613286,6.20647958936402,9.04752076585109,14.0385112415851,21.8463019009811,18.5258498852822,20.2371348831753,0,2.16898637430922,2.16214894624523,0.674586337154561,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.972811360650212,0,4.31304619582064,0.744281895337007,0,0,0.179397413521912,0,0.923765950833023,6.44270800019648,4.07412441105065,4.07388205860452,1.17345124144251,2.51259386162724,1.42826184531608,2.53673742215138,2.20689201748667,1.7717175171902,1.59454768657487,1.63863314715738,1.55416483679306,1.15719246865209,0,0.54390568381871,0.491764273019036,0.275936746304732,288.66996079805,301.820092974923,0.327869890753351,0.757412781613119,14.8288863125641,14.055794794679,20.4652227846159,5.9742199488138,10.6943363559549,7.64306633129848,8.90583543684768,15.7818163272108,15.0209355619679,306.540535866404,3.26462195979018,8.72521457969551,10.4247653986289,4.61916344323099,2.65490276679926,11.8962511715941,8.76738315197778,6.78978287121233,5.90603785761546,5.84126781093462,5.42699415653264,3.99887102425256,3.92147116223193,1.8962205476149,0,0,47.3211051997765,6.30213829109586,6.72665155670323,8.14480733120051,16.3153014950892,23.5446839234733,21.72047071948,45.0608124689607,0.23467170806371,0.21183207086382,2.20528398054962,0.8244312647074,1.77610869365496,0.784068024066026,0.835606408021955,0.984845398470368,2.91480836629851,240.496616707631,0.170870880797853,6.19160603889667,2.03713980106683,0.941842285023455,0.956859594047176,0.915112692826091,0.849892149969277,1.25956307091292,1.52019971184866,2.86401185404534,10.9135917785492,5.08298667817122,3.78018692876304,1.88179466413022,1.52853794622324,3.64133735239016,5.53778153359751,2.35580347785627,2.98114438571124,0.621339313086926,0,5.38259565758324,4.30192075188454,3.88902376688095,1.80823752868824,2.70329800785245,4.5769323071844,2.73429208172295,1.78260885523708,0.966336483304024,0.576060012515731,1.26404448251271,2.02725215290164,1.84879722896689,1.94881234466693,1.25318686967237,0.39736270956253,1.08175904567972,1.77227432609493,1.21159739937777,1.295515713135,1.91569751759997,1.94915761479505,1.15454209968395,1.5193997283604,0.906921534460845,3.32978930061097,0.897138566094757,4.86865387455827,3.09103350451505,1.31377732815827,1.28206136987086,0.857473516316263,1.50471631210609,293.670958160875,353.990106874019,322.54017406638,403.683125325322,308.287133896789,327.08555756974,276.75922509504,254.431479821685,213.43007463156,273.895204916713,3.21740777510948,10.3746467084268,10.2440163452481,13.8570828728928,10.4806581313991,15.8105417267012,8.66762238426299,9.68364769022803,11.8740107548972,9.34979683526051,9.37873409593887,8.11093267960128,9.64507526939789,10.5001249943986,11.2573519153002,14.7651044297753,12.7472758539341,13.6965546529231,5.76920261124629,8.97913412819824,10.9718160763333,10.6485483695602,10.0143199777875,9.88355633099834,9.41093804153306,9.22299226019274,10.7927503994936,11.8381370147029,10.7285249938231,10.1005608898393,12.2194068667899,10.0474572023075,13.0953933814301,9.14127362997199,11.3814900478873,29.2278376187397,10.9947855969342,11.8179079726564,10.7121465958552,8.6030653456611,6.95603506861264
|phase1_expression=7.8472935081349,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,2.06597317506522,1.267098499365,3.27690336850791,1.02730780935303,2.71225340584144,2.22560948910567,5.33264454755884,0,1.61980213911861,0,1.41957974411207,1.23402990245165,0.42438965179803,56.2986580800082,8.14185799847259,11.4927907221132,0.799962113967033,0.91763712426868,0,0,0.646413698057667,0.190023419456374,0.504060259519861,0.443461021310609,5.08024538767705,1.84519436275371,0,0,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.62203089951223,2.20256102594018,3.12956537739216,4.36050312760893,3.29529274101708,3.30530828426282,2.09979632438044,7.18762821824858,0.671130424230945,3.62681071005672,1.68046899571232,0.771778308107841,0.85960031981627,0.515672092277442,103.990660881833,106.327186833679,115.357315438125,1.35537812827653,0,0.449949858640699,2.96659908770092,0,17.0772062995491,18.8266969607562,28.0998849355974,33.3464667679276,27.7628948983824,237.947270008368,193.922578955517,39.932000544075,29.4245596025986,51.4762520501612,461.385541387439,472.953900267535,436.088947914475,102.475645566361,92.7684706128434,76.5742654718437,396.16067558296,310.644960737487,319.653934349087,166.759779378096,163.44268955737,102.706094649741,0.757261933331841,2.26714680320357,0.869593466105033,0,0,1.07940638327563,0,0,11.5164424508037,0.681721290312231,0.519572009205738,1.41335829804136,6.4787973097273,8.98285341900225,17.8363667794652,0,0,0.253359865475099,0,12.6744106488157,0,7.71899123137089,5.55153045651635,7.00270600117925,6.22661842591358,5.72746034099966,5.40908052824242,3.51866455723091,0.494389935468748,2.89198713839823,0,1.29413479957927,0.441683036920787,2.90925151881133,3.72783522436244,195.284791606702,296.367090141039,0.766371165625774,1.31796636956512,0,0.508280908292259,309.916832928578,225.090296586764,84.314070267732,271.165939499951,238.071090774538,337.655572409285,282.462039000966,6.21220119486929,1.99051152976149,2.27450482590307,25.6739064181498,5.98554037628437,6.20735681970377,11.884100567153,13.7141384230501,23.6767017046621,24.725948014976,30.6404639310313,73.9891640313585,1.29340795759705,4.9167580843633,4.57472922826267,3.72632745126877,1.94633074457919,2.089512999133,1.23469281844766,9.15557627365069,0,0,0.284163499395593,23.6123380690472,20.1692411583743,14.4049649168812,16.5721314909647,17.3152523937715,13.5755059340893,18.3701816352822,16.6329508867764,11.4430035519826,13.3293478429919,9.35754545250843,7.78260571640215,7.74859933354261,7.90380415047782,7.51555945058082,196.200522010331,49.6000231668151,0.660837565967596,1.05780226665418,8.10495352033889,6.0381534683714,4.25262622362908,3.02525286935014,2.66853652613844,2.66315876557583,0.949058123089023,3.12928013975621,4.02136334080431,3.97912944082302,2.53453313254856,2.69645822596266,1.08069024937347,1.59313018603494,1.70701110857774,3.65595240351132,1.1270773567308,5.09128319613286,6.20647958936402,9.04752076585109,14.0385112415851,21.8463019009811,18.5258498852822,20.2371348831753,0,2.16898637430922,2.16214894624523,0.674586337154561,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.972811360650212,0,4.31304619582064,0.744281895337007,0,0,0.179397413521912,0,0.923765950833023,6.44270800019648,4.07412441105065,4.07388205860452,1.17345124144251,2.51259386162724,1.42826184531608,2.53673742215138,2.20689201748667,1.7717175171902,1.59454768657487,1.63863314715738,1.55416483679306,1.15719246865209,0,0.54390568381871,0.491764273019036,0.275936746304732,288.66996079805,301.820092974923,0.327869890753351,0.757412781613119,14.8288863125641,14.055794794679,20.4652227846159,5.9742199488138,10.6943363559549,7.64306633129848,8.90583543684768,15.7818163272108,15.0209355619679,306.540535866404,3.26462195979018,8.72521457969551,10.4247653986289,4.61916344323099,2.65490276679926,11.8962511715941,8.76738315197778,6.78978287121233,5.90603785761546,5.84126781093462,5.42699415653264,3.99887102425256,3.92147116223193,1.8962205476149,0,0,47.3211051997765,6.30213829109586,6.72665155670323,8.14480733120051,16.3153014950892,23.5446839234733,21.72047071948,45.0608124689607,0.23467170806371,0.21183207086382,2.20528398054962,0.8244312647074,1.77610869365496,0.784068024066026,0.835606408021955,0.984845398470368,2.91480836629851,240.496616707631,0.170870880797853,6.19160603889667,2.03713980106683,0.941842285023455,0.956859594047176,0.915112692826091,0.849892149969277,1.25956307091292,1.52019971184866,2.86401185404534,10.9135917785492,5.08298667817122,3.78018692876304,1.88179466413022,1.52853794622324,3.64133735239016,5.53778153359751,2.35580347785627,2.98114438571124,0.621339313086926,0,5.38259565758324,4.30192075188454,3.88902376688095,1.80823752868824,2.70329800785245,4.5769323071844,2.73429208172295,1.78260885523708,0.966336483304024,0.576060012515731,1.26404448251271,2.02725215290164,1.84879722896689,1.94881234466693,1.25318686967237,0.39736270956253,1.08175904567972,1.77227432609493,1.21159739937777,1.295515713135,1.91569751759997,1.94915761479505,1.15454209968395,1.5193997283604,0.906921534460845,3.32978930061097,0.897138566094757,4.86865387455827,3.09103350451505,1.31377732815827,1.28206136987086,0.857473516316263,1.50471631210609,293.670958160875,353.990106874019,322.54017406638,403.683125325322,308.287133896789,327.08555756974,276.75922509504,254.431479821685,213.43007463156,273.895204916713,3.21740777510948,10.3746467084268,10.2440163452481,13.8570828728928,10.4806581313991,15.8105417267012,8.66762238426299,9.68364769022803,11.8740107548972,9.34979683526051,9.37873409593887,8.11093267960128,9.64507526939789,10.5001249943986,11.2573519153002,14.7651044297753,12.7472758539341,13.6965546529231,5.76920261124629,8.97913412819824,10.9718160763333,10.6485483695602,10.0143199777875,9.88355633099834,9.41093804153306,9.22299226019274,10.7927503994936,11.8381370147029,10.7285249938231,10.1005608898393,12.2194068667899,10.0474572023075,13.0953933814301,9.14127362997199,11.3814900478873,29.2278376187397,10.9947855969342,11.8179079726564,10.7121465958552,8.6030653456611,6.95603506861264
|short_description=p1@Sv2a
|short_description=p1@Sv2a
}}
}}

Revision as of 11:58, 19 April 2012

Short description:p1@Sv2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sv2a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_022030, uc008qmf.1_5end
EntrezGene:Sv2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sv2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A356.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C3103.99
Mouse Granule cells, donor2.CNhs12357.11731-123E3106.33
Mouse Granule cells, donor3.CNhs12108.11636-122C7115.36
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C817.08
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1237.95
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5193.92
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.93
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D651.48
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3461.39
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3472.95
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7436.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4102.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F492.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D876.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4396.16
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5310.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6319.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6166.76
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6163.44
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1102.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.67
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C15.41
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B2195.28
cerebellum, neonate N30.CNhs11135.1395-42I2296.37
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A4309.92
corpus striatum, adult.CNhs10487.19-21D8225.09
corpus striatum, neonate N00.CNhs11226.630-43F184.31
cortex, adult.CNhs10473.12-14D5271.17
cortex, neonate N30.CNhs11107.1392-42F2238.07
diencephalon, adult.CNhs10482.20-12F2337.66
diencephalon, neonate N30.CNhs11201.1388-42B2282.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G425.67
eyeball, embryo E12.CNhs11016.345-16C65.99
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C623.68
eyeball, neonate N01.CNhs11140.1532-43E724.73
eyeball, neonate N02.CNhs11205.1551-44G830.64
eyeball, neonate N16.CNhs11188.777-19A273.99
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E923.61
heart, embryo E12.CNhs11015.353-12F520.17
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D416.57
heart, embryo E15.CNhs11017.431-16C817.32
heart, embryo E16.CNhs11021.457-17C613.58
heart, embryo E17.CNhs11025.479-18E518.37
heart, embryo E18.CNhs11030.1283-20G316.63
heart, neonate N00.CNhs11213.639-21E311.44
heart, neonate N03.CNhs11221.1349-25I213.33
heart, neonate N10.CNhs11118.749-24G19.36
heart, neonate N16.CNhs11209.782-15G17.78
heart, neonate N20.CNhs11127.821-26I67.75
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D27.52
hippocampus, adult.CNhs10478.13-16E8196.20
hippocampus, neonate N00.CNhs11228.627-43G149.60
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G79.05
kidney, neonate N10.CNhs11206.758-6D514.04
kidney, neonate N20.CNhs11113.832-19I121.85
kidney, neonate N25.CNhs11122.1353-25F318.53
kidney, neonate N30.CNhs11203.1385-42H120.24
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C2288.67
medulla oblongata, neonate N30.CNhs11200.1396-42A3301.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.47
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.02
olfactory brain, adult.CNhs10489.18-22I9306.54
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F411.90
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G847.32
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C76.73
pituitary gland, embryo E14.CNhs11037.398-44A58.14
pituitary gland, embryo E15.CNhs10592.427-16B916.32
pituitary gland, embryo E16.CNhs11036.449-43F623.54
pituitary gland, embryo E17.CNhs11039.1265-44F521.72
pituitary gland, neonate N00.CNhs11190.1308-22E945.06
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C9240.50
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C16.19
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E310.91
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A95.54
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1293.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2353.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3322.54
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7403.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4308.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5327.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6276.76
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7254.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8213.43
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9273.90
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H210.24
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F215.81
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.14
whole body, embryo E17.5.CNhs10513.490-9F911.38
whole body, embryo E17.CNhs10517.475-3I529.23
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C211.82
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:95985101..95985156,%2B&oldid=1065326"