Personal tools

FFCP PHASE1:Mm9::chr3:127483379..127483447,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=
|phase1_expression=7.20669811971573,3.83872948403297,5.45999087267443,1.51232105653415,2.00358291978539,3.02182689441402,4.20502753071946,0.258246646883153,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.437102012094987,0.666219523631325,0.809901069559304,0,0.630924330716475,0.822686601634433,1.27316895539409,7.05859308253879,0,0,0.47997726838022,0.91763712426868,2.29692785646008,3.01533397311352,3.23206849028834,4.75058548640935,2.77233142735924,1.99557459589774,0,0,0,3.17736781726402,1.49611180822643,4.69589519403449,5.02237956884289,5.4693474116666,5.75876118371178,8.82347232046521,2.73218193983378,6.311634589405,9.69405498411945,8.31290836000019,11.0128051297009,3.12956537739216,0.218025156380447,0.659058548203415,0.194429899074283,0.979904951377538,0,0.167782606057736,0,0.672187598284928,1.54355661621568,1.71920063963254,4.12537673821954,0,0,0,1.0165335962074,3.55717918444456,0.449949858640699,1.97773272513395,2.8419204597844,0.898800331555214,0.768436610643109,0.725827286159344,0.540023753326763,0.420649922702764,1.42825492201902,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.638436690425939,1.0752457327937,0.527545150920775,0.365950574409639,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,0,0.569486723196412,0.186399445825301,0.37863096666592,1.43585964202892,7.53647670624362,3.44169550792555,0.679971333707751,0.539703191637817,0,0,2.38755514223978,6.30592193538814,2.33807404142582,2.47337702157238,6.4787973097273,8.98285341900225,10.1922095882658,0,1.08245520505607,0.760079596425296,1.51657333504435,1.94112595522402,8.80388804400384,6.38301197978747,1.90833859442749,2.13125834818499,2.07553947530453,3.46662073271032,2.82212897125692,2.26199864393416,0.741584903203122,3.03658649531814,2.65383165584962,1.7794353494215,2.87093973998512,1.45462575940567,1.86391761218122,0,0.41889341362691,4.08731288333746,5.15205035375457,2.99951365496704,6.86179226194549,1.64769703345305,0.457500602818626,0.251308704225729,0.869121600961382,2.81287003063364,2.49345653471472,0.648965052271031,1.32391173005411,4.72746488318353,2.77995034277042,0.631325567659422,1.30120442962704,1.37941262660084,2.16074555766419,1.05493372485001,1.42876648217788,1.15302348256365,1.21812241927647,1.81092359517311,0.431135985865684,1.89106080167819,0.879755620819744,1.97276159184817,3.33656699070717,3.1342694986995,1.4404749548556,1.79130840136644,6.31991868581911,4.37491442095016,5.68326998791185,1.65700618028402,1.64168241986767,1.62055855314913,1.89395788468168,2.55793501271625,1.69693824176116,3.0229412817553,1.87791380979733,1.16765342367169,1.6455984991348,2.95501435342371,3.4859588104718,3.07019973593198,5.04965265169416,3.62357330653004,2.94405927989778,0.720332286654991,0.330418782983798,2.64450566663544,1.06644125267617,3.71578674976702,4.51036114627327,2.21851877085677,2.89091456998331,1.90225626112559,3.79623249235609,1.64698954724011,2.01068167040216,4.17808591286417,2.9244613067868,3.59527763461689,3.6743468478698,2.38969527905241,0.758671603812327,1.14248512609729,1.1270773567308,2.8511185898344,1.74557238450863,2.24434623649019,3.28829993046138,3.98547399544926,2.04098346193787,1.85095745882701,1.1858105083486,2.00214126859313,0.589676985339609,1.34917267430912,1.01430060694251,0.964708639009667,2.29163266603278,1.15078454980324,0.648540907100142,2.19649130550465,2.87536413054709,2.23284568601102,4.36852742360385,1.26289438973556,1.25578189465339,1.4473305640901,4.98833613449833,2.08440552947533,2.11854469374634,2.37643120085263,3.05097322775053,4.02015017860358,2.38043640886014,2.73187107000918,4.72905432318573,3.32197034473162,4.46473352240964,4.26044618260919,3.45369963731791,3.18227928879325,3.01582567878545,4.89515115436839,0.983528546038072,1.10374698521893,2.24770825982909,1.64096361229084,2.45902418065013,1.76729649043061,1.26203287766503,1.56175497718655,1.29254038639679,3.10659437338318,3.34198011123591,5.09537755419898,4.04810701674894,2.04579100537918,6.7198922250909,2.57057053137446,5.25178315270594,1.6025904330053,3.25773918707152,5.1140738121486,0,0.971122544619926,0.906970670894253,1.13163047853539,0.295301892880773,1.84461088766356,1.29214146584111,2.18120237686503,0.712994756769443,1.26414703174326,0,1.03135543248187,7.83011093233712,1.98067203434441,0.776152102696527,1.50035924522115,3.54680467284547,3.38900753443934,2.63278432963394,1.8267896946876,2.3467170806371,0.42366414172764,0.220528398054962,1.97863503529776,1.13025098687134,1.62844897306021,1.67121281604391,1.80554989719567,3.49777003955821,2.59595422814714,3.2465467351592,1.23832120777933,2.03713980106683,2.0720530270516,2.7338845544205,1.60144721244566,7.47905091972963,3.63873776041511,5.52799895217695,0,1.73984796469624,3.86306987541013,3.02414954301044,2.29997125615916,3.49380101993884,3.50647300600534,3.47144514046411,2.35580347785627,2.98114438571124,1.24267862617385,2.81846469342095,1.04661582230785,1.32366792365678,2.33341426012857,2.0665571756437,3.37912250981556,2.11243029562357,3.1249052362548,3.67007705489988,2.89900944991207,11.5212002503146,2.52808896502543,1.01362607645082,1.43795340030758,1.29920822977795,0.537080087002444,2.38417625737518,1.32214994471966,1.62458479892035,2.22126189885925,1.82896335972,1.81487133246313,1.55932609183604,1.15454209968395,2.45441494581295,3.17422537061296,0.221985953374065,0,0,5.40930863290133,2.25218970541418,4.39563898241436,4.71610433973945,1.00314420807073,0.564751842617067,1.38097570952153,2.86447756719698,1.3748254587495,2.05524755931193,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,2.07104124700728,0.415149390336707,2.39414924040619,1.19513524027894,0.972426868273176,0.838452650511929,1.2869045591501,1.55572709461131,1.44224540067226,0.64183841918363,1.51618327058278,1.01391719956096,1.32038438970253,1.31098110457835,1.6646539625266,2.52716063404698,2.38146845641537,1.62238056322798,2.50781986602817,2.47251540481984,1.32479028120958,0.685738504770831,1.95223386775271,1.66905332963125,2.18019624948493,1.97629698872194,0.930760686808441,2.0122077016005,0.526139422875686,1.49384525230448,0.561142271657738,1.30498519936592,1.0835493061312,0.409231043169689,1.39443157067369,2.12197272079256,0.999242311751784,1.87145286756327,1.28922632428979,0.956441660344217,2.8676884485537,1.62307484934295
|phase1_expression=7.20669811971573,3.83872948403297,5.45999087267443,1.51232105653415,2.00358291978539,3.02182689441402,4.20502753071946,0.258246646883153,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.437102012094987,0.666219523631325,0.809901069559304,0,0.630924330716475,0.822686601634433,1.27316895539409,7.05859308253879,0,0,0.47997726838022,0.91763712426868,2.29692785646008,3.01533397311352,3.23206849028834,4.75058548640935,2.77233142735924,1.99557459589774,0,0,0,3.17736781726402,1.49611180822643,4.69589519403449,5.02237956884289,5.4693474116666,5.75876118371178,8.82347232046521,2.73218193983378,6.311634589405,9.69405498411945,8.31290836000019,11.0128051297009,3.12956537739216,0.218025156380447,0.659058548203415,0.194429899074283,0.979904951377538,0,0.167782606057736,0,0.672187598284928,1.54355661621568,1.71920063963254,4.12537673821954,0,0,0,1.0165335962074,3.55717918444456,0.449949858640699,1.97773272513395,2.8419204597844,0.898800331555214,0.768436610643109,0.725827286159344,0.540023753326763,0.420649922702764,1.42825492201902,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.638436690425939,1.0752457327937,0.527545150920775,0.365950574409639,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,0,0.569486723196412,0.186399445825301,0.37863096666592,1.43585964202892,7.53647670624362,3.44169550792555,0.679971333707751,0.539703191637817,0,0,2.38755514223978,6.30592193538814,2.33807404142582,2.47337702157238,6.4787973097273,8.98285341900225,10.1922095882658,0,1.08245520505607,0.760079596425296,1.51657333504435,1.94112595522402,8.80388804400384,6.38301197978747,1.90833859442749,2.13125834818499,2.07553947530453,3.46662073271032,2.82212897125692,2.26199864393416,0.741584903203122,3.03658649531814,2.65383165584962,1.7794353494215,2.87093973998512,1.45462575940567,1.86391761218122,0,0.41889341362691,4.08731288333746,5.15205035375457,2.99951365496704,6.86179226194549,1.64769703345305,0.457500602818626,0.251308704225729,0.869121600961382,2.81287003063364,2.49345653471472,0.648965052271031,1.32391173005411,4.72746488318353,2.77995034277042,0.631325567659422,1.30120442962704,1.37941262660084,2.16074555766419,1.05493372485001,1.42876648217788,1.15302348256365,1.21812241927647,1.81092359517311,0.431135985865684,1.89106080167819,0.879755620819744,1.97276159184817,3.33656699070717,3.1342694986995,1.4404749548556,1.79130840136644,6.31991868581911,4.37491442095016,5.68326998791185,1.65700618028402,1.64168241986767,1.62055855314913,1.89395788468168,2.55793501271625,1.69693824176116,3.0229412817553,1.87791380979733,1.16765342367169,1.6455984991348,2.95501435342371,3.4859588104718,3.07019973593198,5.04965265169416,3.62357330653004,2.94405927989778,0.720332286654991,0.330418782983798,2.64450566663544,1.06644125267617,3.71578674976702,4.51036114627327,2.21851877085677,2.89091456998331,1.90225626112559,3.79623249235609,1.64698954724011,2.01068167040216,4.17808591286417,2.9244613067868,3.59527763461689,3.6743468478698,2.38969527905241,0.758671603812327,1.14248512609729,1.1270773567308,2.8511185898344,1.74557238450863,2.24434623649019,3.28829993046138,3.98547399544926,2.04098346193787,1.85095745882701,1.1858105083486,2.00214126859313,0.589676985339609,1.34917267430912,1.01430060694251,0.964708639009667,2.29163266603278,1.15078454980324,0.648540907100142,2.19649130550465,2.87536413054709,2.23284568601102,4.36852742360385,1.26289438973556,1.25578189465339,1.4473305640901,4.98833613449833,2.08440552947533,2.11854469374634,2.37643120085263,3.05097322775053,4.02015017860358,2.38043640886014,2.73187107000918,4.72905432318573,3.32197034473162,4.46473352240964,4.26044618260919,3.45369963731791,3.18227928879325,3.01582567878545,4.89515115436839,0.983528546038072,1.10374698521893,2.24770825982909,1.64096361229084,2.45902418065013,1.76729649043061,1.26203287766503,1.56175497718655,1.29254038639679,3.10659437338318,3.34198011123591,5.09537755419898,4.04810701674894,2.04579100537918,6.7198922250909,2.57057053137446,5.25178315270594,1.6025904330053,3.25773918707152,5.1140738121486,0,0.971122544619926,0.906970670894253,1.13163047853539,0.295301892880773,1.84461088766356,1.29214146584111,2.18120237686503,0.712994756769443,1.26414703174326,0,1.03135543248187,7.83011093233712,1.98067203434441,0.776152102696527,1.50035924522115,3.54680467284547,3.38900753443934,2.63278432963394,1.8267896946876,2.3467170806371,0.42366414172764,0.220528398054962,1.97863503529776,1.13025098687134,1.62844897306021,1.67121281604391,1.80554989719567,3.49777003955821,2.59595422814714,3.2465467351592,1.23832120777933,2.03713980106683,2.0720530270516,2.7338845544205,1.60144721244566,7.47905091972963,3.63873776041511,5.52799895217695,0,1.73984796469624,3.86306987541013,3.02414954301044,2.29997125615916,3.49380101993884,3.50647300600534,3.47144514046411,2.35580347785627,2.98114438571124,1.24267862617385,2.81846469342095,1.04661582230785,1.32366792365678,2.33341426012857,2.0665571756437,3.37912250981556,2.11243029562357,3.1249052362548,3.67007705489988,2.89900944991207,11.5212002503146,2.52808896502543,1.01362607645082,1.43795340030758,1.29920822977795,0.537080087002444,2.38417625737518,1.32214994471966,1.62458479892035,2.22126189885925,1.82896335972,1.81487133246313,1.55932609183604,1.15454209968395,2.45441494581295,3.17422537061296,0.221985953374065,0,0,5.40930863290133,2.25218970541418,4.39563898241436,4.71610433973945,1.00314420807073,0.564751842617067,1.38097570952153,2.86447756719698,1.3748254587495,2.05524755931193,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,2.07104124700728,0.415149390336707,2.39414924040619,1.19513524027894,0.972426868273176,0.838452650511929,1.2869045591501,1.55572709461131,1.44224540067226,0.64183841918363,1.51618327058278,1.01391719956096,1.32038438970253,1.31098110457835,1.6646539625266,2.52716063404698,2.38146845641537,1.62238056322798,2.50781986602817,2.47251540481984,1.32479028120958,0.685738504770831,1.95223386775271,1.66905332963125,2.18019624948493,1.97629698872194,0.930760686808441,2.0122077016005,0.526139422875686,1.49384525230448,0.561142271657738,1.30498519936592,1.0835493061312,0.409231043169689,1.39443157067369,2.12197272079256,0.999242311751784,1.87145286756327,1.28922632428979,0.956441660344217,2.8676884485537,1.62307484934295
|short_description=p1@Alpk1
|short_description=p1@Alpk1
}}
}}

Revision as of 10:48, 19 April 2012

Short description:p1@Alpk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Alpk1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000029662, ENSMUST00000160586, ENSMUST00000161239, ENSMUST00000162859, NM_027808, uc008rhl.1, uc012cxm.1_5end
EntrezGene:Alpk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Alpk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.86
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E211.52
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:127483379..127483447,-&oldid=1060979"