Personal tools

FFCP PHASE1:Mm9::chr8:126001759..126001804,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Afg3l1_5end
|description=CAGE_peak_1_at_Afg3l1_5end
|id=chr8:126001759..126001804,+
|id=chr8:126001759..126001804,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=14.8938427807458,14.3079917132138,16.3799726180233,16.9379958331825,14.0250804384977,12.5909453933917,13.0823078733494,6.45616617207881,7.74337971834167,7.0219357896598,12.6701296486874,9.6524312384357,9.75844160607873,9.17914225399473,12.6581709489952,12.755941845559,20.2872944657163,8.51747846467242,10.1464680868247,12.3072999021429,11.9060606211498,10.425549876093,14.1047886135025,17.5991665072747,19.9586074528438,14.9300310669905,14.2151458732495,13.7901588918969,18.0522248483555,15.8778981748756,16.8515188098032,12.065582795733,22.1423323530445,0,11.8429164098023,12.8000676926039,11.0251452381679,21.7636447983192,14.0640362014284,16.2292360631877,14.1175557127443,10.9287277593351,14.0798002379035,4.65818226509636,5.27160042341476,11.1963518818626,6.25913075478431,52.5440626876876,26.3623419281366,26.8313260722511,30.6570263359544,34.5006154475932,17.1138258178891,11.6057942721815,7.05796978199174,21.3525331909836,18.3381401560804,11.3447860301037,20.636279007679,14.2827564403449,24.0855933332348,15.2480039431109,21.3430751066673,30.1466405289269,20.7661936139065,32.6820852875206,18.5752068521411,25.3584081512226,18.1456821539836,19.8458729347585,19.9808713283813,17.7103610330358,19.6573001446936,17.3936934885235,29.0411777185256,28.4957823849107,6.60695285996332,12.896421146604,9.21639199537461,18.2003077067668,23.1463738314096,16.1483144872596,12.5632349550621,5.06486349028512,12.2238598221448,14.4368006882097,13.9524247183121,16.9623495701024,21.0518817466252,18.4394606660557,8.40607017234866,26.673140186423,24.478968013479,33.4615978815447,33.1385972898311,25.9855594516455,15.1679973742292,14.3161470965569,16.3665182899807,17.3136391510067,14.7885590765515,8.98285341900225,33.1246811618639,21.3320010945999,21.8655951421326,24.8292668165597,16.6823066854878,22.4942243046548,8.80388804400384,11.2816025689267,20.6447538851702,16.1366703505435,18.4492397804847,20.347556474604,11.7588707135705,23.625319169979,14.8316980640624,12.0017466243527,16.8076004870476,14.8825501951616,18.7715290691335,10.6672555689749,3.72783522436244,11.1256702864388,14.2423760633149,9.45191104271788,11.2626217035565,22.1964010467561,13.9777249780371,5.84183493678809,6.8625090422794,17.8429180000267,5.38855392596057,9.46147192122223,8.51930982694196,8.11206315338788,15.4795833052481,11.8186622079588,7.83440551144392,9.89076722666428,10.539755879979,11.4951052216736,9.00310649026746,8.74087943447147,10.8178033650611,11.5302348256365,16.2103983488331,8.53721123438752,15.089759505299,10.0226222488944,12.1406275673125,12.4941567483718,8.89751197521913,9.75106066262066,12.3469281844766,11.9420560091096,25.9818879305897,27.2788781541598,17.3339734631312,15.9486844852336,13.6025114789036,15.3052752241863,14.9149183418682,16.5281954667819,13.884040159864,17.2075119115302,18.5108646965737,23.4698338158011,24.8485373369356,18.3867559768587,20.5104088151015,20.1755982646959,17.564009223284,18.9231050452124,8.20130799400096,10.496270462687,12.5559137533843,11.9002754998595,11.5175655289026,12.3085436086032,11.7269389803105,11.6976444281539,11.1189021922435,11.4135375667535,11.8632265386128,17.7874871101932,15.3314477368164,12.7332142106337,13.4525220112193,10.7858329038507,11.6714546932335,12.9441827615339,9.293727146701,13.2528274627285,22.5415471346161,8.96065842519383,11.4431967428899,14.8687938167475,15.9356073553128,18.0084380535115,22.607816809158,22.8284753255331,21.937494404449,15.5165948315967,15.1350426237166,16.6397963164792,15.8230894683032,8.92355491083942,12.731292589071,16.1109836972454,14.4300351829781,21.9649130550465,20.1275489138296,18.2349064357567,14.3537329632698,20.2063102357689,24.577445652502,35.2183770595258,7.02062122633098,14.2118558827864,14.0149879740142,11.2031756611624,10.7957514212711,14.9080569123216,8.09348379012447,15.6106918286239,9.77337893458384,10.85176979279,13.0752910299139,11.6342953448174,14.850908440467,9.9807850421243,16.5870412333199,14.6854534631052,10.8188140064188,13.2449638226272,8.0275294993896,8.08760637486202,14.2623402477708,22.7223834483936,10.0962630213202,9.37052986311932,12.4945570685023,13.860190281248,11.1399337041197,18.1168979704853,13.3587531552715,10.2289550268959,10.6727700045561,9.96096080907602,10.0777460497871,16.2039699337202,14.4969393824683,10.7230579932148,17.2568679841952,10.9251286269742,15.4185014052023,15.8428266994954,18.6040192514887,15.0643222492524,14.7304127105886,11.2695456138027,14.2598951353889,25.5989773928011,31.6255825724996,31.9720184069379,9.19186935535228,10.8036656418786,11.1248468053169,12.4315480318324,12.0591358876746,10.167022603318,11.8475294833527,18.267896946876,11.9682571112492,21.183207086382,12.3495902910779,13.1909002353184,8.07322133479528,15.1385441569671,12.4147237763262,12.4747083806247,12.2421951384537,6.11903496634682,11.9609616558497,11.9704383418669,10.1856990053341,14.6927396463659,14.6262823661497,16.4720284708696,14.2781881194838,9.23679585336143,8.84479832348312,12.4107180341965,13.1279437336171,13.8257237646257,13.7166782843688,10.6635030967379,10.0446779323242,13.2167059457124,11.9847510801737,17.0141362289619,13.4799572223465,13.0481255748254,14.0923234671048,11.5127740453864,14.7258056506817,14.3893879374595,15.2408591703723,9.63049915297436,13.378725205616,16.0151393358059,11.4296685424025,8.69702834973622,8.06484017522023,8.53230025696081,18.2452693761148,14.6876668745703,11.5629532450238,11.4577085227188,14.1063761894698,11.538763153917,11.8151621739662,10.9043765943999,11.507227804905,11.4941851055998,9.94070383545475,11.7378446801202,9.81765978325179,11.789979947991,27.9702301251322,29.7850003943459,21.321346278238,10.0458588896739,14.451550609741,10.6227942075014,8.1459984050045,13.5424468089548,7.34177395402186,5.52390283808612,7.44764167471216,10.1393377582776,5.48066015816514,8.3093328712867,4.72515750162264,6.75481804836331,8.60970577069989,8.28416498802912,11.3128208866753,11.9707462020309,13.3172212488225,12.398442570483,10.0614318061432,13.9721066422011,7.77863547305653,12.3621034343337,5.77654577265267,10.1078884705519,7.85785829659743,12.0720858487089,15.3572072250607,14.213583833881,16.1393667765273,17.1465728861907,16.3396899582246,17.7476482826609,19.7801232385587,15.8974833745149,11.6575545811041,16.1502983604997,17.6442780561018,10.9009812474246,10.6343599869324,13.0306496153182,16.097661612804,13.6796249947678,14.3952360676613,11.7839877048125,15.5411873742668,14.2831499444567,24.1446315470117,14.7189999126668,14.4679958235856,12.9901500527732,13.3341016813883,15.2558448374292,13.5814715768879,13.8972594045295,10.8977882741598
|phase1_expression=14.8938427807458,14.3079917132138,16.3799726180233,16.9379958331825,14.0250804384977,12.5909453933917,13.0823078733494,6.45616617207881,7.74337971834167,7.0219357896598,12.6701296486874,9.6524312384357,9.75844160607873,9.17914225399473,12.6581709489952,12.755941845559,20.2872944657163,8.51747846467242,10.1464680868247,12.3072999021429,11.9060606211498,10.425549876093,14.1047886135025,17.5991665072747,19.9586074528438,14.9300310669905,14.2151458732495,13.7901588918969,18.0522248483555,15.8778981748756,16.8515188098032,12.065582795733,22.1423323530445,0,11.8429164098023,12.8000676926039,11.0251452381679,21.7636447983192,14.0640362014284,16.2292360631877,14.1175557127443,10.9287277593351,14.0798002379035,4.65818226509636,5.27160042341476,11.1963518818626,6.25913075478431,52.5440626876876,26.3623419281366,26.8313260722511,30.6570263359544,34.5006154475932,17.1138258178891,11.6057942721815,7.05796978199174,21.3525331909836,18.3381401560804,11.3447860301037,20.636279007679,14.2827564403449,24.0855933332348,15.2480039431109,21.3430751066673,30.1466405289269,20.7661936139065,32.6820852875206,18.5752068521411,25.3584081512226,18.1456821539836,19.8458729347585,19.9808713283813,17.7103610330358,19.6573001446936,17.3936934885235,29.0411777185256,28.4957823849107,6.60695285996332,12.896421146604,9.21639199537461,18.2003077067668,23.1463738314096,16.1483144872596,12.5632349550621,5.06486349028512,12.2238598221448,14.4368006882097,13.9524247183121,16.9623495701024,21.0518817466252,18.4394606660557,8.40607017234866,26.673140186423,24.478968013479,33.4615978815447,33.1385972898311,25.9855594516455,15.1679973742292,14.3161470965569,16.3665182899807,17.3136391510067,14.7885590765515,8.98285341900225,33.1246811618639,21.3320010945999,21.8655951421326,24.8292668165597,16.6823066854878,22.4942243046548,8.80388804400384,11.2816025689267,20.6447538851702,16.1366703505435,18.4492397804847,20.347556474604,11.7588707135705,23.625319169979,14.8316980640624,12.0017466243527,16.8076004870476,14.8825501951616,18.7715290691335,10.6672555689749,3.72783522436244,11.1256702864388,14.2423760633149,9.45191104271788,11.2626217035565,22.1964010467561,13.9777249780371,5.84183493678809,6.8625090422794,17.8429180000267,5.38855392596057,9.46147192122223,8.51930982694196,8.11206315338788,15.4795833052481,11.8186622079588,7.83440551144392,9.89076722666428,10.539755879979,11.4951052216736,9.00310649026746,8.74087943447147,10.8178033650611,11.5302348256365,16.2103983488331,8.53721123438752,15.089759505299,10.0226222488944,12.1406275673125,12.4941567483718,8.89751197521913,9.75106066262066,12.3469281844766,11.9420560091096,25.9818879305897,27.2788781541598,17.3339734631312,15.9486844852336,13.6025114789036,15.3052752241863,14.9149183418682,16.5281954667819,13.884040159864,17.2075119115302,18.5108646965737,23.4698338158011,24.8485373369356,18.3867559768587,20.5104088151015,20.1755982646959,17.564009223284,18.9231050452124,8.20130799400096,10.496270462687,12.5559137533843,11.9002754998595,11.5175655289026,12.3085436086032,11.7269389803105,11.6976444281539,11.1189021922435,11.4135375667535,11.8632265386128,17.7874871101932,15.3314477368164,12.7332142106337,13.4525220112193,10.7858329038507,11.6714546932335,12.9441827615339,9.293727146701,13.2528274627285,22.5415471346161,8.96065842519383,11.4431967428899,14.8687938167475,15.9356073553128,18.0084380535115,22.607816809158,22.8284753255331,21.937494404449,15.5165948315967,15.1350426237166,16.6397963164792,15.8230894683032,8.92355491083942,12.731292589071,16.1109836972454,14.4300351829781,21.9649130550465,20.1275489138296,18.2349064357567,14.3537329632698,20.2063102357689,24.577445652502,35.2183770595258,7.02062122633098,14.2118558827864,14.0149879740142,11.2031756611624,10.7957514212711,14.9080569123216,8.09348379012447,15.6106918286239,9.77337893458384,10.85176979279,13.0752910299139,11.6342953448174,14.850908440467,9.9807850421243,16.5870412333199,14.6854534631052,10.8188140064188,13.2449638226272,8.0275294993896,8.08760637486202,14.2623402477708,22.7223834483936,10.0962630213202,9.37052986311932,12.4945570685023,13.860190281248,11.1399337041197,18.1168979704853,13.3587531552715,10.2289550268959,10.6727700045561,9.96096080907602,10.0777460497871,16.2039699337202,14.4969393824683,10.7230579932148,17.2568679841952,10.9251286269742,15.4185014052023,15.8428266994954,18.6040192514887,15.0643222492524,14.7304127105886,11.2695456138027,14.2598951353889,25.5989773928011,31.6255825724996,31.9720184069379,9.19186935535228,10.8036656418786,11.1248468053169,12.4315480318324,12.0591358876746,10.167022603318,11.8475294833527,18.267896946876,11.9682571112492,21.183207086382,12.3495902910779,13.1909002353184,8.07322133479528,15.1385441569671,12.4147237763262,12.4747083806247,12.2421951384537,6.11903496634682,11.9609616558497,11.9704383418669,10.1856990053341,14.6927396463659,14.6262823661497,16.4720284708696,14.2781881194838,9.23679585336143,8.84479832348312,12.4107180341965,13.1279437336171,13.8257237646257,13.7166782843688,10.6635030967379,10.0446779323242,13.2167059457124,11.9847510801737,17.0141362289619,13.4799572223465,13.0481255748254,14.0923234671048,11.5127740453864,14.7258056506817,14.3893879374595,15.2408591703723,9.63049915297436,13.378725205616,16.0151393358059,11.4296685424025,8.69702834973622,8.06484017522023,8.53230025696081,18.2452693761148,14.6876668745703,11.5629532450238,11.4577085227188,14.1063761894698,11.538763153917,11.8151621739662,10.9043765943999,11.507227804905,11.4941851055998,9.94070383545475,11.7378446801202,9.81765978325179,11.789979947991,27.9702301251322,29.7850003943459,21.321346278238,10.0458588896739,14.451550609741,10.6227942075014,8.1459984050045,13.5424468089548,7.34177395402186,5.52390283808612,7.44764167471216,10.1393377582776,5.48066015816514,8.3093328712867,4.72515750162264,6.75481804836331,8.60970577069989,8.28416498802912,11.3128208866753,11.9707462020309,13.3172212488225,12.398442570483,10.0614318061432,13.9721066422011,7.77863547305653,12.3621034343337,5.77654577265267,10.1078884705519,7.85785829659743,12.0720858487089,15.3572072250607,14.213583833881,16.1393667765273,17.1465728861907,16.3396899582246,17.7476482826609,19.7801232385587,15.8974833745149,11.6575545811041,16.1502983604997,17.6442780561018,10.9009812474246,10.6343599869324,13.0306496153182,16.097661612804,13.6796249947678,14.3952360676613,11.7839877048125,15.5411873742668,14.2831499444567,24.1446315470117,14.7189999126668,14.4679958235856,12.9901500527732,13.3341016813883,15.2558448374292,13.5814715768879,13.8972594045295,10.8977882741598
|short_description=p1@Afg3l1
|short_description=p1@Afg3l1
}}
}}

Revision as of 05:30, 19 April 2012

Short description:p1@Afg3l1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Afg3l1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000001520, ENSMUST00000098320, NM_054070, NR_028260, uc009nwc.2, uc009nwd.2, uc009nwe.2_5end
EntrezGene:Afg3l1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Afg3l1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.08
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.96
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I213.79
Ileum epithelium, pool1.CNhs13199.10252-104B918.05
Ileum epithelium, pool2.CNhs13232.10253-104C115.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C252.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B826.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C326.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C430.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C320.64
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C724.09
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.25
Mouse Meningeal cells, donor3.CNhs12109.11639-122D121.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C730.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D232.68
Mouse Microglia, donor1.CNhs12629.11718-123C818.58
Mouse Microglia, donor2.CNhs12634.11736-123E825.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.85
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.96
Mouse Schwann, donor1.CNhs12507.11728-123D921.05
Mouse Schwann, donor2.CNhs12573.11746-123F918.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C424.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C833.46
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.49
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D711.28
adrenal gland, embryo E14.CNhs11038.406-44C520.64
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I118.45
adrenal gland, embryo E18.CNhs11026.1262-18F520.35
adrenal gland, neonate N00.CNhs11191.1311-23C111.76
adrenal gland, neonate N25.CNhs11223.1377-27I323.63
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H112.00
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F514.88
bone (os femoris), neonate N16.CNhs11225.1525-43A618.77
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.26
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.98
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F117.84
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.82
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C610.54
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D48.74
eyeball, neonate N00.CNhs11207.633-15C610.82
eyeball, neonate N01.CNhs11140.1532-43E711.53
eyeball, neonate N02.CNhs11205.1551-44G816.21
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E215.09
forelimb, embryo E12.CNhs10600.359-14H210.02
forelimb, embryo E13.CNhs10589.384-1E212.14
forelimb, embryo E14.CNhs10577.413-26A812.49
forelimb, embryo E15.CNhs11007.437-20E78.90
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B512.35
gonad, embryo E13.CNhs11044.1564-45I611.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.98
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.28
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.33
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F513.60
heart, embryo E13.CNhs11013.376-3I915.31
heart, embryo E14.CNhs10597.403-26D414.91
heart, embryo E15.CNhs11017.431-16C816.53
heart, embryo E16.CNhs11021.457-17C613.88
heart, embryo E17.CNhs11025.479-18E517.21
heart, embryo E18.CNhs11030.1283-20G318.51
heart, neonate N00.CNhs11213.639-21E323.47
heart, neonate N03.CNhs11221.1349-25I224.85
heart, neonate N10.CNhs11118.749-24G118.39
heart, neonate N16.CNhs11209.782-15G120.51
heart, neonate N20.CNhs11127.821-26I620.18
heart, neonate N25.CNhs11196.1351-25D317.56
heart, neonate N30.CNhs11202.1390-42D218.92
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A311.90
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D512.31
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E917.79
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F212.73
intestine, neonate N10.CNhs11098.755-23A513.45
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E311.67
intestine, neonate N30.CNhs11131.1384-42G112.94
kidney, embryo E14.CNhs10606.411-4I99.29
kidney, embryo E15.CNhs10997.434-16F813.25
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I28.96
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G714.87
kidney, neonate N10.CNhs11206.758-6D515.94
kidney, neonate N20.CNhs11113.832-19I118.01
kidney, neonate N25.CNhs11122.1353-25F322.61
kidney, neonate N30.CNhs11203.1385-42H122.83
liver, adult pregnant day01.CNhs10466.508-5B221.94
liver, embryo E12.CNhs10601.355-15F815.52
liver, embryo E13.CNhs10524.378-3H615.14
liver, embryo E14.CNhs10594.409-16E116.64
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A312.73
liver, embryo E18.CNhs10579.499-43G416.11
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G221.96
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A320.21
liver, neonate N25.CNhs11198.1368-26H124.58
liver, neonate N30.CNhs11106.1382-42D135.22
lung, adult.CNhs10474.28-22B17.02
lung, embryo E12.CNhs10522.354-16G214.21
lung, embryo E14.CNhs10604.404-26F814.01
lung, embryo E15.CNhs11020.432-17C511.20
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A614.91
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C615.61
lung, neonate N06.CNhs11212.683-20E59.77
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E613.08
lung, neonate N20.CNhs11109.822-18A411.63
lung, neonate N25.CNhs11119.1359-25C714.85
lung, neonate N30.CNhs11133.1394-42H29.98
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A38.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.49
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I710.08
ovary, embryo E18.CNhs11040.505-44H716.20
ovary, neonate N00.CNhs11217.1299-22I414.50
oviduct, adult pregnant day01.CNhs10500.988-6G610.72
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F410.93
pancreas, embryo E15.CNhs11042.1556-45F215.42
pancreas, embryo E16.CNhs11003.460-26E515.84
pancreas, embryo E17.CNhs10599.1558-45G318.60
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G914.73
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B625.60
pancreas, neonate N25.CNhs11094.1555-45E231.63
pancreas, neonate N30.CNhs11182.1548-44H531.97
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C711.12
pituitary gland, embryo E14.CNhs11037.398-44A512.43
pituitary gland, embryo E15.CNhs10592.427-16B912.06
pituitary gland, embryo E16.CNhs11036.449-43F610.17
pituitary gland, embryo E17.CNhs11039.1265-44F511.85
pituitary gland, neonate N00.CNhs11190.1308-22E918.27
placenta, adult pregnant day10.CNhs10472.539-13I711.97
placenta, adult pregnant day17.CNhs10464.577-18G321.18
prostate, adult.CNhs10470.859-1F812.35
skin, adult.CNhs10492.30-1C313.19
skin, neonate N00.CNhs11124.650-25G48.07
skin, neonate N03.CNhs11215.662-22H315.14
skin, neonate N06.CNhs11097.693-20I512.41
skin, neonate N10.CNhs11108.762-6C412.47
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G211.96
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F210.19
spleen, neonate N10.CNhs11116.752-24D114.69
spleen, neonate N20.CNhs11112.824-19H114.63
spleen, neonate N25.CNhs11099.1354-25G316.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.84
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E313.13
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D413.72
stomach, embryo E17.CNhs11006.1035-18D510.66
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B813.22
stomach, neonate N07.CNhs11210.718-18A911.98
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I113.48
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C514.73
testis, embryo E16.CNhs11033.470-26G514.39
testis, embryo E17.CNhs11029.486-18I515.24
testis, embryo E18.CNhs11027.503-18G59.63
testis, neonate N00.CNhs11189.1300-22B713.38
testis, neonate N07.CNhs11222.726-26I416.02
testis, neonate N10.CNhs11204.763-44D911.43
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I418.25
thymus, embryo E15.CNhs11005.430-45I214.69
thymus, embryo E16.CNhs11002.456-26C511.56
thymus, embryo E17.CNhs10581.478-18C111.46
thymus, embryo E18.CNhs10595.1273-19G414.11
thymus, neonate N02.CNhs11181.1541-43F811.54
thymus, neonate N03.CNhs11137.2104-43C711.82
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D311.51
thymus, neonate N10.CNhs11194.748-24E411.49
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G711.74
thymus, neonate N30.CNhs11132.1393-42G29.82
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H327.97
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.32
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F514.45
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D58.15
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I811.31
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H213.32
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B110.06
whole body, embryo E16.CNhs10514.453-14F213.97
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.78
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.72
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C215.26
whole body, neonate N01.CNhs10576.659-23C613.58
whole body, neonate N06.CNhs10515.692-21D113.90
whole body, neonate N10.CNhs10518.761-6B410.90





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:126001759..126001804,%2B&oldid=1029630"