Personal tools

FFCP PHASE1:Mm9::chrX:99384649..99384677,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:99384649..99384677,-
|short_description=p1@Rps4x
|description=CAGE_peak_1_at_Rps4x_5end
|association_with_transcript=0bp_to_ENSMUST00000152739,ENSMUST00000164229,uc009tym.1_5end
|EntrezGene=20102
|EntrezGene=20102
|HGNC=
|HGNC=
|UniProt=Q545F8
|UniProt=Q545F8
|association_with_transcript=0bp_to_ENSMUST00000152739,ENSMUST00000164229,uc009tym.1_5end
|description=CAGE_peak_1_at_Rps4x_5end
|id=chrX:99384649..99384677,-
|ontology_enrichment_disease=
|phase1_expression=33.9515555862163,12.563114675017,15.9249733786338,10.2837831844322,17.0304548181758,26.1891664182548,41.1158247448125,71.6634445100748,161.34387558581,128.267360424452,150.158158133768,89.0257294387954,127.373343068817,79.8148274085446,11.3257319017325,64.9945608321341,80.4496159847369,114.985959273078,104.069855106756,129.014454146601,4.42225108785563,8.14185799847259,126.681897732384,49.9176359115429,59.6464130774642,32.1569899904411,37.0455316696804,22.4090081993325,45.225573830617,32.5118867390311,32.5943850663298,63.5030673459631,29.5231098040594,47.5445043046316,56.0372142317473,76.301702219548,63.7008391538592,23.0192396905299,32.0347491254758,29.3173296625327,4.70585190424811,11.6117732442936,16.0218416500281,9.56815816614387,11.6583470902442,11.3798986340243,2.34717403304412,2.18025156380447,3.29529274101708,4.86074747685709,3.3596741190087,0,124.326911088783,113.15649415377,116.288454503293,5.65970759279083,10.0286703978565,4.12537673821954,3.23706337375356,3.70293685490423,0.633831403506179,4.06613438482959,2.66788438833342,5.39939830368839,3.9554654502679,2.1314403448383,2.69640099466564,1.53687322128622,6.22137673850866,6.88530285491622,5.67877395648731,2.85650984403804,3.53389665522582,5.14461356702807,5.271500906003,3.67687514644008,5.50579404996943,4.08599481872601,4.76180253094355,5.40733779693795,5.6722339033494,4.68822033501084,4.18774498502071,5.6276261003168,3.66715794664344,3.83017161115768,4.55589378557129,8.01517617048792,43.2396563932481,34.4606314086942,39.4215704634282,43.0211938490693,10.879541339324,4.31762553310254,3.89865850468601,4.92829575807069,5.33688796500657,9.71452838694929,87.8076695557696,108.475249374674,39.4361575374705,29.5150898052931,22.9324715735981,28.4426681261332,59.5350362780839,66.887004485426,80.8839112023653,3.88225191044804,15.5362730188303,6.82833839698194,10.0621489524359,7.30717147949139,5.5347719341454,6.48107354376277,4.8211369925639,5.02666365318702,3.21353458054686,4.19338135067744,7.07688441559899,9.05894359705491,7.72945314611377,11.1521308221101,1.86391761218122,3.22058876712702,3.77004072264219,7.66371165625774,87.9443013873455,169.172570140141,86.6618948638301,4.94309110035915,5.03250663100489,6.91098936620754,3.12883776346098,4.09144731728529,2.90903262383384,5.51620294430376,8.24898847187562,7.34001126599549,6.82351447770922,4.41927897361595,12.1012011955314,12.8745178482745,6.30217454318722,8.74087943447147,6.53150391852747,5.89323113310309,5.99691037182265,6.20888089773638,8.40715172438085,9.45530400839096,11.6127741948206,8.11024209982027,8.89751197521913,10.447564995665,9.4659782747654,14.131432944113,58.9859077343117,104.483250288574,11.0823764764281,7.66365358381357,11.7263029990548,9.7233513188948,4.97163944728941,7.47704080640135,8.79322543458056,7.44108623201305,9.12129564758705,6.30532848782715,8.55711219550098,6.40253109908471,4.45878452502207,8.47959927066927,6.36695334344047,3.22095405024892,6.09840850835969,7.82075054082562,0.660837565967596,7.1401652999157,10.6644125267617,10.6828869055802,11.2114691350221,6.85723983719365,7.56085349072559,7.41879941838981,6.16887780007865,6.42325923423642,5.27803938480566,4.77495532898762,7.21367122340745,8.08937467788799,5.61958929674205,2.58883655230677,8.91439134479484,11.0821057231437,12.3978509240388,11.2008230314923,11.0552917685547,6.10181633045771,6.32365371242573,4.87113488332687,4.70996183524124,5.55287237648102,6.22550516883013,15.1829046201646,10.0245087507734,14.1663130802458,8.11440485554012,12.5412123071257,7.38414970166117,9.78166867332756,7.13394997810156,9.33508804839477,8.62609239164127,4.83783231969054,6.86482880852033,6.56705082662491,8.07288360848605,2.41221760681684,6.46636165583116,11.5589761179996,8.96307370431142,12.0519010900384,12.6732734075791,8.71032538697442,7.37935286746643,7.21994497073856,8.6699329258405,5.75808193086815,9.72674088810671,8.1931657357869,7.08008425650172,6.94315481191256,70.871903451458,52.7588513304148,11.8023425524569,10.4855963595798,6.58257418949947,5.62616095642575,5.40985319743029,4.03953483526997,8.20321370482267,10.5418460960092,10.1248996934415,10.2756583119597,8.02075226696619,10.190755108398,7.2865926301481,11.6902343164525,9.88219444866309,4.4984984299053,7.80670468645477,10.6839362200353,6.51547837414304,9.07335676348945,15.9294166007955,12.3818124439041,14.511530734308,9.9960692270626,11.8120757152309,13.2197113615889,10.5955600198971,11.6330793432802,12.83390562185,16.1178746547266,15.8127912862498,16.5016869197099,8.85142974959849,11.7039711120352,9.18446654857557,8.78781843629528,8.51233121482913,8.38333442729732,7.89835298890181,5.48036908406279,4.22409074514679,5.93129798418696,4.19003956304428,8.73897140589844,5.48979050766079,9.77069383836125,9.43041517624778,10.9974402829191,4.08073171281791,3.52308073819968,10.2522528478712,11.5576646059405,12.5932278611404,14.1276342753518,11.072232445403,12.8115776995653,82.0995816870321,77.2532016826592,64.6775877404703,7.63736494412091,8.54107182669065,11.3858901591035,12.4206141945071,9.82714991268003,11.5732158785474,8.36158947585888,7.52146447100557,7.59092231753686,5.31421390496351,6.83473244395618,0,10.1671251309906,10.2584264083401,9.52810822885833,10.5911055251739,9.12363077650202,8.44972118249428,5.9894017028217,3.98465508817701,1.20792060413003,1.15212002503146,6.95224465381992,15.4071163620525,11.91447103112,11.6928740680016,12.5318686967237,10.3314304486258,11.0579813558371,9.7475087935221,11.8130746439333,9.29723041190998,9.78013995827353,9.94070383545475,11.0643617886379,8.6488907614361,6.80191150845634,54.3865585766458,48.9837657087737,59.7669234256119,4.44336066274038,6.38120416534019,8.42497471629419,9.64657705855796,3.51100472824754,5.64751842617067,3.68260189205742,2.86447756719698,15.4667864109319,2.74033007908257,2.2661816921691,4.72515750162264,4.05289082901798,4.53142408984205,1.03552062350364,5.60451676954554,9.97562183502578,8.87814749921498,10.6966955510049,4.61148957781561,5.69914876195044,10.4455962066759,8.03536723231687,8.98573786857083,6.82282471762253,7.35089969681695,7.73367999682912,8.70866019469906,8.89949618427683,7.40917549527411,5.23923060411381,5.91010062318763,8.87382414133043,9.89006161927936,6.77115032618228,12.0004238334895,7.27650805253284,10.9680647375768,8.72078499793971,9.03450051987174,9.05376304440939,7.13419094203813,7.89209134313529,9.37048385536446,7.2948495315506,8.77899134118889,8.76689893142515,9.00308294973317,6.66228417099654,9.45242393807593,10.2422336954558,6.55008503647143,7.52048689169044,5.35607329792761,4.41182838239031,6.02856372613096
|phase1_expression=33.9515555862163,12.563114675017,15.9249733786338,10.2837831844322,17.0304548181758,26.1891664182548,41.1158247448125,71.6634445100748,161.34387558581,128.267360424452,150.158158133768,89.0257294387954,127.373343068817,79.8148274085446,11.3257319017325,64.9945608321341,80.4496159847369,114.985959273078,104.069855106756,129.014454146601,4.42225108785563,8.14185799847259,126.681897732384,49.9176359115429,59.6464130774642,32.1569899904411,37.0455316696804,22.4090081993325,45.225573830617,32.5118867390311,32.5943850663298,63.5030673459631,29.5231098040594,47.5445043046316,56.0372142317473,76.301702219548,63.7008391538592,23.0192396905299,32.0347491254758,29.3173296625327,4.70585190424811,11.6117732442936,16.0218416500281,9.56815816614387,11.6583470902442,11.3798986340243,2.34717403304412,2.18025156380447,3.29529274101708,4.86074747685709,3.3596741190087,0,124.326911088783,113.15649415377,116.288454503293,5.65970759279083,10.0286703978565,4.12537673821954,3.23706337375356,3.70293685490423,0.633831403506179,4.06613438482959,2.66788438833342,5.39939830368839,3.9554654502679,2.1314403448383,2.69640099466564,1.53687322128622,6.22137673850866,6.88530285491622,5.67877395648731,2.85650984403804,3.53389665522582,5.14461356702807,5.271500906003,3.67687514644008,5.50579404996943,4.08599481872601,4.76180253094355,5.40733779693795,5.6722339033494,4.68822033501084,4.18774498502071,5.6276261003168,3.66715794664344,3.83017161115768,4.55589378557129,8.01517617048792,43.2396563932481,34.4606314086942,39.4215704634282,43.0211938490693,10.879541339324,4.31762553310254,3.89865850468601,4.92829575807069,5.33688796500657,9.71452838694929,87.8076695557696,108.475249374674,39.4361575374705,29.5150898052931,22.9324715735981,28.4426681261332,59.5350362780839,66.887004485426,80.8839112023653,3.88225191044804,15.5362730188303,6.82833839698194,10.0621489524359,7.30717147949139,5.5347719341454,6.48107354376277,4.8211369925639,5.02666365318702,3.21353458054686,4.19338135067744,7.07688441559899,9.05894359705491,7.72945314611377,11.1521308221101,1.86391761218122,3.22058876712702,3.77004072264219,7.66371165625774,87.9443013873455,169.172570140141,86.6618948638301,4.94309110035915,5.03250663100489,6.91098936620754,3.12883776346098,4.09144731728529,2.90903262383384,5.51620294430376,8.24898847187562,7.34001126599549,6.82351447770922,4.41927897361595,12.1012011955314,12.8745178482745,6.30217454318722,8.74087943447147,6.53150391852747,5.89323113310309,5.99691037182265,6.20888089773638,8.40715172438085,9.45530400839096,11.6127741948206,8.11024209982027,8.89751197521913,10.447564995665,9.4659782747654,14.131432944113,58.9859077343117,104.483250288574,11.0823764764281,7.66365358381357,11.7263029990548,9.7233513188948,4.97163944728941,7.47704080640135,8.79322543458056,7.44108623201305,9.12129564758705,6.30532848782715,8.55711219550098,6.40253109908471,4.45878452502207,8.47959927066927,6.36695334344047,3.22095405024892,6.09840850835969,7.82075054082562,0.660837565967596,7.1401652999157,10.6644125267617,10.6828869055802,11.2114691350221,6.85723983719365,7.56085349072559,7.41879941838981,6.16887780007865,6.42325923423642,5.27803938480566,4.77495532898762,7.21367122340745,8.08937467788799,5.61958929674205,2.58883655230677,8.91439134479484,11.0821057231437,12.3978509240388,11.2008230314923,11.0552917685547,6.10181633045771,6.32365371242573,4.87113488332687,4.70996183524124,5.55287237648102,6.22550516883013,15.1829046201646,10.0245087507734,14.1663130802458,8.11440485554012,12.5412123071257,7.38414970166117,9.78166867332756,7.13394997810156,9.33508804839477,8.62609239164127,4.83783231969054,6.86482880852033,6.56705082662491,8.07288360848605,2.41221760681684,6.46636165583116,11.5589761179996,8.96307370431142,12.0519010900384,12.6732734075791,8.71032538697442,7.37935286746643,7.21994497073856,8.6699329258405,5.75808193086815,9.72674088810671,8.1931657357869,7.08008425650172,6.94315481191256,70.871903451458,52.7588513304148,11.8023425524569,10.4855963595798,6.58257418949947,5.62616095642575,5.40985319743029,4.03953483526997,8.20321370482267,10.5418460960092,10.1248996934415,10.2756583119597,8.02075226696619,10.190755108398,7.2865926301481,11.6902343164525,9.88219444866309,4.4984984299053,7.80670468645477,10.6839362200353,6.51547837414304,9.07335676348945,15.9294166007955,12.3818124439041,14.511530734308,9.9960692270626,11.8120757152309,13.2197113615889,10.5955600198971,11.6330793432802,12.83390562185,16.1178746547266,15.8127912862498,16.5016869197099,8.85142974959849,11.7039711120352,9.18446654857557,8.78781843629528,8.51233121482913,8.38333442729732,7.89835298890181,5.48036908406279,4.22409074514679,5.93129798418696,4.19003956304428,8.73897140589844,5.48979050766079,9.77069383836125,9.43041517624778,10.9974402829191,4.08073171281791,3.52308073819968,10.2522528478712,11.5576646059405,12.5932278611404,14.1276342753518,11.072232445403,12.8115776995653,82.0995816870321,77.2532016826592,64.6775877404703,7.63736494412091,8.54107182669065,11.3858901591035,12.4206141945071,9.82714991268003,11.5732158785474,8.36158947585888,7.52146447100557,7.59092231753686,5.31421390496351,6.83473244395618,0,10.1671251309906,10.2584264083401,9.52810822885833,10.5911055251739,9.12363077650202,8.44972118249428,5.9894017028217,3.98465508817701,1.20792060413003,1.15212002503146,6.95224465381992,15.4071163620525,11.91447103112,11.6928740680016,12.5318686967237,10.3314304486258,11.0579813558371,9.7475087935221,11.8130746439333,9.29723041190998,9.78013995827353,9.94070383545475,11.0643617886379,8.6488907614361,6.80191150845634,54.3865585766458,48.9837657087737,59.7669234256119,4.44336066274038,6.38120416534019,8.42497471629419,9.64657705855796,3.51100472824754,5.64751842617067,3.68260189205742,2.86447756719698,15.4667864109319,2.74033007908257,2.2661816921691,4.72515750162264,4.05289082901798,4.53142408984205,1.03552062350364,5.60451676954554,9.97562183502578,8.87814749921498,10.6966955510049,4.61148957781561,5.69914876195044,10.4455962066759,8.03536723231687,8.98573786857083,6.82282471762253,7.35089969681695,7.73367999682912,8.70866019469906,8.89949618427683,7.40917549527411,5.23923060411381,5.91010062318763,8.87382414133043,9.89006161927936,6.77115032618228,12.0004238334895,7.27650805253284,10.9680647375768,8.72078499793971,9.03450051987174,9.05376304440939,7.13419094203813,7.89209134313529,9.37048385536446,7.2948495315506,8.77899134118889,8.76689893142515,9.00308294973317,6.66228417099654,9.45242393807593,10.2422336954558,6.55008503647143,7.52048689169044,5.35607329792761,4.41182838239031,6.02856372613096
|short_description=p1@Rps4x
}}
}}

Revision as of 05:15, 19 April 2012

Short description:p1@Rps4x
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rps4x_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000152739, ENSMUST00000164229, uc009tym.1_5end
EntrezGene:Rps4x
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rps4x

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G733.95
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I841.12
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E971.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7161.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2128.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6150.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F189.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4127.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E879.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A364.99
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A580.45
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2114.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4104.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6129.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9126.68
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D149.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D259.65
GP2+ M cell, pool1.CNhs13228.11845-124H932.16
GP2+ M cell, pool2.CNhs13231.11846-124I137.05
GP2+ M cell, pool3.CNhs13240.11847-124I222.41
Ileum epithelium, pool1.CNhs13199.10252-104B945.23
Ileum epithelium, pool2.CNhs13232.10253-104C132.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C832.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I363.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G629.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F556.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F676.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F763.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2124.33
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9113.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1116.29
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D943.24
Mouse Schwann, donor2.CNhs12573.11746-123F934.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G339.42
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E387.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8108.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G159.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G266.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G380.88
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C787.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1169.17
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D486.66
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.34
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E212.87
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D48.74
eyeball, neonate N00.CNhs11207.633-15C66.53
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H29.46
forelimb, embryo E13.CNhs10589.384-1E211.61
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E78.90
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B59.47
gonad, embryo E13.CNhs11044.1564-45I614.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C858.99
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2104.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.08
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F511.73
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E36.31
heart, neonate N03.CNhs11221.1349-25I28.56
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G14.46
heart, neonate N20.CNhs11127.821-26I68.48
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D811.21
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F77.42
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A57.21
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I98.91
kidney, embryo E15.CNhs10997.434-16F811.08
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C711.06
kidney, neonate N00.CNhs11214.646-21G76.10
kidney, neonate N10.CNhs11206.758-6D56.32
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H15.55
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F815.18
liver, embryo E13.CNhs10524.378-3H610.02
liver, embryo E14.CNhs10594.409-16E114.17
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G211.56
lung, embryo E14.CNhs10604.404-26F88.96
lung, embryo E15.CNhs11020.432-17C512.05
lung, embryo E16.CNhs10998.458-17B612.67
lung, embryo E17.CNhs10605.480-44A68.71
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E58.67
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E69.73
lung, neonate N20.CNhs11109.822-18A48.19
lung, neonate N25.CNhs11119.1359-25C77.08
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A170.87
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A152.76
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H210.49
medulla oblongata, adult.CNhs10477.17-12C26.58
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.12
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F412.38
pancreas, embryo E15.CNhs11042.1556-45F214.51
pancreas, embryo E16.CNhs11003.460-26E510.00
pancreas, embryo E17.CNhs10599.1558-45G311.81
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G910.60
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B616.12
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E611.70
pituitary gland, embryo E13.CNhs11009.370-44C79.18
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B98.51
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G35.93
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H39.77
skin, neonate N06.CNhs11097.693-20I59.43
skin, neonate N10.CNhs11108.762-6C411.00
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G210.25
spleen, embryo E16.CNhs11035.461-43C111.56
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D114.13
spleen, neonate N20.CNhs11112.824-19H111.07
spleen, neonate N25.CNhs11099.1354-25G312.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C682.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C977.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D364.68
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G811.39
stomach, embryo E16.CNhs11022.459-17D412.42
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C611.57
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A97.52
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F510.17
testis, embryo E15.CNhs11034.443-27C510.26
testis, embryo E16.CNhs11033.470-26G59.53
testis, embryo E17.CNhs11029.486-18I510.59
testis, embryo E18.CNhs11027.503-18G59.12
testis, neonate N00.CNhs11189.1300-22B78.45
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I415.41
thymus, embryo E15.CNhs11005.430-45I211.91
thymus, embryo E16.CNhs11002.456-26C511.69
thymus, embryo E17.CNhs10581.478-18C112.53
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F811.06
thymus, neonate N03.CNhs11137.2104-43C79.75
thymus, neonate N06.CNhs11197.681-26C411.81
thymus, neonate N07.CNhs11211.713-19D39.30
thymus, neonate N10.CNhs11194.748-24E49.78
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G711.06
thymus, neonate N30.CNhs11132.1393-42G28.65
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H354.39
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F748.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G559.77
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:99384649..99384677,-&oldid=1027913"