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FFCP PHASE1:Mm9::chrX:69062111..69062152,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:69062111..69062152,+
|short_description=p1@Vma21
|description=CAGE_peak_1_at_Vma21_5end
|association_with_transcript=0bp_to_ENSMUST00000101496,ENSMUST00000114575,ENSMUST00000138979,ENSMUST00000154054,NM_001081356,uc009tkf.2_5end
|EntrezGene=67048
|EntrezGene=67048
|HGNC=
|HGNC=
|UniProt=Q78T54,F2Z447
|UniProt=Q78T54,F2Z447
|association_with_transcript=0bp_to_ENSMUST00000101496,ENSMUST00000114575,ENSMUST00000138979,ENSMUST00000154054,NM_001081356,uc009tkf.2_5end
|description=CAGE_peak_1_at_Vma21_5end
|id=chrX:69062111..69062152,+
|ontology_enrichment_disease=
|phase1_expression=28.1861970904437,9.42233600626275,8.18998630901165,5.14189159221611,5.50985302940982,12.0873075776561,15.8856595604957,13.4288256379239,6.47628121897667,7.95819389494778,22.6007718057667,20.8205334977828,15.7504671536709,15.4734112281625,18.9872564234928,14.9831697868471,12.5921138063066,16.4040325986284,18.7846774039862,15.2780274647291,19.8150866051993,22.539045922601,21.1571829202538,21.4389846543165,15.3704218315004,14.9300310669905,15.0766698655676,14.6520438226405,18.2422482678119,18.9022597319948,25.9424697466706,10.1604907753541,7.99584223859941,31.6963362030877,12.4206196493048,17.2884031172832,10.6168065256432,15.9042019680025,29.6907430919044,25.6526634547161,15.2940186888064,19.8083190637949,18.4493934151838,43.0567117476474,40.6521494190253,35.9751634236896,49.2906546939265,32.9217986134474,30.5363794000916,36.9416808241138,28.2772571683232,35.9381410912429,20.3016953329861,19.5847778343063,17.8129713545506,49.3938117189018,35.2436131124671,41.7694394744728,30.1451526680801,28.0365219014177,26.6209189472595,43.710944636918,38.239676232779,48.1446348745548,53.3987835786166,44.7602472416043,29.0612107202853,24.5899715405795,24.5744381171092,19.9808788730902,25.86997024622,27.7081454871689,30.9215957332259,29.1528102131591,18.9774032616108,21.1420320920305,71.5753226496027,46.7335657391787,52.0726147738665,24.7946220932764,27.0803425063133,21.3574481928272,42.9941818462127,43.3327209724394,42.0195181386228,36.8285731842085,38.5827254965569,35.7886935984577,36.6514775732611,38.0880662938199,18.2614627882057,40.4399222181252,23.1190253460635,38.318926606285,56.5305483179472,45.6987424839282,23.4542181620026,35.6199374188141,30.6547485431385,43.1074280902615,42.3938693527808,6.41632387071589,2.54805239706646,0,35.0715486438167,39.2707791486403,40.4419556011827,24.777901899036,35.9923658269569,35.0323448192986,25.502343034622,27.4018930480927,32.0555541185921,33.7618714837875,24.693628498498,36.0663117116169,11.3709685157812,44.5366019313328,15.0383793831479,27.1768307911647,19.8757366614354,14.5462575940567,20.5030937339934,50.6510778829977,46.0782754989601,19.1592791406444,25.7602517687729,29.395233818677,25.541115641686,53.6250489069265,46.2075608846813,35.4345272958278,59.2740931855663,60.0931324726277,54.2326796300452,50.2947915510049,21.6917845001174,22.0200337979865,32.8539585963777,36.1959992124735,19.778307330331,26.6686441142829,27.7295679900238,31.6480117455002,30.8885706147028,31.3878614697882,30.5467622064716,32.0792179716379,12.5029435901048,13.615637772083,14.9558455539357,18.4124415239163,21.409638190371,19.5021213252413,25.7227670509929,17.1169469463904,19.6619692447706,20.5878325691772,25.5747149456033,26.5120988845442,22.5145017581852,22.3276956211658,23.2009840873506,23.6117078096885,26.0711420779669,26.5088697015465,31.3879879637554,23.2363031310667,24.6839774870221,28.7293062138417,27.0769823883158,25.5849977994332,29.8588156795829,23.7545361205858,58.8811855979556,34.8846635965774,10.5734010554815,16.1314845664762,20.4756720513825,15.0953836709285,19.330119198314,16.3363654944907,17.3454874198999,20.3541419940438,13.7613427847908,22.2343588877415,16.0854533632172,20.0946036761562,19.1064805376738,20.6728463990471,15.1296634912286,16.1304431336037,22.5704802134167,16.5660343284107,14.6520056375005,23.0126000465205,19.5892012039302,19.5678937493989,31.1756128022588,31.1457412236961,33.1267315745301,31.5896739639809,33.2026942337607,18.6866518402025,21.4249304673391,16.6397963164792,12.1716072833102,13.7470981058878,14.7682994033223,12.6586300478357,15.7271169971784,22.7885972946108,21.5652309791032,26.0498663367952,28.395428253425,29.8043075977592,37.3146620125577,27.0168371963486,29.93001680699,21.6020209418353,19.2298672201591,18.1627241779451,20.1833613528112,21.775813467436,19.7576221935391,19.9036320814955,26.0097987775215,25.2469746199603,29.4991322016351,25.7265404103709,33.155516518252,27.4833211304872,55.7927750575307,110.956759499017,40.324670387561,29.2492951083016,57.6376618056173,58.4886316095094,26.0656563148914,22.2174415939848,27.1337068697981,28.111589589358,22.4040333642111,27.720380562496,24.7306528231457,20.6645867475848,23.8838313988188,21.3346776275258,28.4607200121497,57.1951943230817,19.3038515883245,15.4917075190512,21.6639655940256,20.2913251256219,11.9470624505967,14.5668381692989,17.8370898609203,22.0667943314401,17.4228116799656,27.3617281670095,14.4719844174204,23.2661586865604,19.250858432775,28.7593449721593,28.4630243152497,24.7525303795648,34.3844001811326,22.3275756598825,14.1000965323202,19.0759961178117,21.8128487379996,28.0039043635251,27.6442354611563,14.6143175575008,18.7737366450968,21.6068712281097,25.8018225724305,19.4565778470946,24.7040572844735,31.5436597374255,25.9037986486806,24.2928531622691,17.488850197791,66.3822581197625,14.1822831062218,17.3364969089107,18.8898417917106,15.0694765603753,16.266613098802,16.0144721244566,22.4371527591889,21.692475110167,24.8759952847963,20.0480829783174,21.9853515538889,19.7219883113043,23.5451642991527,21.9542710815192,24.2382445758257,25.8939545058856,18.5970275382006,21.4639872426904,19.9607058869361,32.9309835936071,5.07323644815771,16.8953697029696,18.3658924407378,18.2784117043405,17.8240556399269,21.6263840628196,16.8994423649886,18.228613878153,18.5601039633508,8.93861247056222,8.06484017522023,19.9087005995752,15.8125667926328,20.3367695186358,18.4487568628469,16.4704560014083,18.6760473494389,20.4332264183947,18.165811842473,20.6981222393703,20.347217376885,21.7784559895576,19.296660386471,20.6855459526708,20.5703347839561,19.4988129909082,16.8709324564289,6.72853924571068,15.4453847054952,28.398870322732,29.0907836949332,18.3151624267265,19.9362592543531,26.0817494098389,47.4391547798336,55.2390283808612,51.5605962095457,64.7886497435702,43.8452812653211,52.877572817279,49.2766425169218,46.8334051353189,47.1268105343573,53.3293121104374,12.6620564052696,22.3453929104577,16.7318933639051,18.4761104971903,15.3017608718427,10.8467669985508,25.5583736971858,16.2767695218726,19.2551525755089,20.4684741528676,21.0387818908899,18.6740077972215,21.4439052106031,22.7929542561335,22.9167521132897,20.9569224164552,21.7862532776328,17.1689206212697,16.8955219329356,19.4302574577404,16.4577241144999,20.4097177083238,21.6976932852062,19.1857269954674,17.2220166160055,20.0536620703273,17.7440133686589,21.3086466264653,21.8644623291837,15.7119836064167,17.3207126461294,18.5188426866059,18.415396942636,22.4658419719651,16.5899685443782,21.9833308585392,22.6913660192046,22.5614606750713,20.6591398634351,24.7062389413857,25.5054619182464
|phase1_expression=28.1861970904437,9.42233600626275,8.18998630901165,5.14189159221611,5.50985302940982,12.0873075776561,15.8856595604957,13.4288256379239,6.47628121897667,7.95819389494778,22.6007718057667,20.8205334977828,15.7504671536709,15.4734112281625,18.9872564234928,14.9831697868471,12.5921138063066,16.4040325986284,18.7846774039862,15.2780274647291,19.8150866051993,22.539045922601,21.1571829202538,21.4389846543165,15.3704218315004,14.9300310669905,15.0766698655676,14.6520438226405,18.2422482678119,18.9022597319948,25.9424697466706,10.1604907753541,7.99584223859941,31.6963362030877,12.4206196493048,17.2884031172832,10.6168065256432,15.9042019680025,29.6907430919044,25.6526634547161,15.2940186888064,19.8083190637949,18.4493934151838,43.0567117476474,40.6521494190253,35.9751634236896,49.2906546939265,32.9217986134474,30.5363794000916,36.9416808241138,28.2772571683232,35.9381410912429,20.3016953329861,19.5847778343063,17.8129713545506,49.3938117189018,35.2436131124671,41.7694394744728,30.1451526680801,28.0365219014177,26.6209189472595,43.710944636918,38.239676232779,48.1446348745548,53.3987835786166,44.7602472416043,29.0612107202853,24.5899715405795,24.5744381171092,19.9808788730902,25.86997024622,27.7081454871689,30.9215957332259,29.1528102131591,18.9774032616108,21.1420320920305,71.5753226496027,46.7335657391787,52.0726147738665,24.7946220932764,27.0803425063133,21.3574481928272,42.9941818462127,43.3327209724394,42.0195181386228,36.8285731842085,38.5827254965569,35.7886935984577,36.6514775732611,38.0880662938199,18.2614627882057,40.4399222181252,23.1190253460635,38.318926606285,56.5305483179472,45.6987424839282,23.4542181620026,35.6199374188141,30.6547485431385,43.1074280902615,42.3938693527808,6.41632387071589,2.54805239706646,0,35.0715486438167,39.2707791486403,40.4419556011827,24.777901899036,35.9923658269569,35.0323448192986,25.502343034622,27.4018930480927,32.0555541185921,33.7618714837875,24.693628498498,36.0663117116169,11.3709685157812,44.5366019313328,15.0383793831479,27.1768307911647,19.8757366614354,14.5462575940567,20.5030937339934,50.6510778829977,46.0782754989601,19.1592791406444,25.7602517687729,29.395233818677,25.541115641686,53.6250489069265,46.2075608846813,35.4345272958278,59.2740931855663,60.0931324726277,54.2326796300452,50.2947915510049,21.6917845001174,22.0200337979865,32.8539585963777,36.1959992124735,19.778307330331,26.6686441142829,27.7295679900238,31.6480117455002,30.8885706147028,31.3878614697882,30.5467622064716,32.0792179716379,12.5029435901048,13.615637772083,14.9558455539357,18.4124415239163,21.409638190371,19.5021213252413,25.7227670509929,17.1169469463904,19.6619692447706,20.5878325691772,25.5747149456033,26.5120988845442,22.5145017581852,22.3276956211658,23.2009840873506,23.6117078096885,26.0711420779669,26.5088697015465,31.3879879637554,23.2363031310667,24.6839774870221,28.7293062138417,27.0769823883158,25.5849977994332,29.8588156795829,23.7545361205858,58.8811855979556,34.8846635965774,10.5734010554815,16.1314845664762,20.4756720513825,15.0953836709285,19.330119198314,16.3363654944907,17.3454874198999,20.3541419940438,13.7613427847908,22.2343588877415,16.0854533632172,20.0946036761562,19.1064805376738,20.6728463990471,15.1296634912286,16.1304431336037,22.5704802134167,16.5660343284107,14.6520056375005,23.0126000465205,19.5892012039302,19.5678937493989,31.1756128022588,31.1457412236961,33.1267315745301,31.5896739639809,33.2026942337607,18.6866518402025,21.4249304673391,16.6397963164792,12.1716072833102,13.7470981058878,14.7682994033223,12.6586300478357,15.7271169971784,22.7885972946108,21.5652309791032,26.0498663367952,28.395428253425,29.8043075977592,37.3146620125577,27.0168371963486,29.93001680699,21.6020209418353,19.2298672201591,18.1627241779451,20.1833613528112,21.775813467436,19.7576221935391,19.9036320814955,26.0097987775215,25.2469746199603,29.4991322016351,25.7265404103709,33.155516518252,27.4833211304872,55.7927750575307,110.956759499017,40.324670387561,29.2492951083016,57.6376618056173,58.4886316095094,26.0656563148914,22.2174415939848,27.1337068697981,28.111589589358,22.4040333642111,27.720380562496,24.7306528231457,20.6645867475848,23.8838313988188,21.3346776275258,28.4607200121497,57.1951943230817,19.3038515883245,15.4917075190512,21.6639655940256,20.2913251256219,11.9470624505967,14.5668381692989,17.8370898609203,22.0667943314401,17.4228116799656,27.3617281670095,14.4719844174204,23.2661586865604,19.250858432775,28.7593449721593,28.4630243152497,24.7525303795648,34.3844001811326,22.3275756598825,14.1000965323202,19.0759961178117,21.8128487379996,28.0039043635251,27.6442354611563,14.6143175575008,18.7737366450968,21.6068712281097,25.8018225724305,19.4565778470946,24.7040572844735,31.5436597374255,25.9037986486806,24.2928531622691,17.488850197791,66.3822581197625,14.1822831062218,17.3364969089107,18.8898417917106,15.0694765603753,16.266613098802,16.0144721244566,22.4371527591889,21.692475110167,24.8759952847963,20.0480829783174,21.9853515538889,19.7219883113043,23.5451642991527,21.9542710815192,24.2382445758257,25.8939545058856,18.5970275382006,21.4639872426904,19.9607058869361,32.9309835936071,5.07323644815771,16.8953697029696,18.3658924407378,18.2784117043405,17.8240556399269,21.6263840628196,16.8994423649886,18.228613878153,18.5601039633508,8.93861247056222,8.06484017522023,19.9087005995752,15.8125667926328,20.3367695186358,18.4487568628469,16.4704560014083,18.6760473494389,20.4332264183947,18.165811842473,20.6981222393703,20.347217376885,21.7784559895576,19.296660386471,20.6855459526708,20.5703347839561,19.4988129909082,16.8709324564289,6.72853924571068,15.4453847054952,28.398870322732,29.0907836949332,18.3151624267265,19.9362592543531,26.0817494098389,47.4391547798336,55.2390283808612,51.5605962095457,64.7886497435702,43.8452812653211,52.877572817279,49.2766425169218,46.8334051353189,47.1268105343573,53.3293121104374,12.6620564052696,22.3453929104577,16.7318933639051,18.4761104971903,15.3017608718427,10.8467669985508,25.5583736971858,16.2767695218726,19.2551525755089,20.4684741528676,21.0387818908899,18.6740077972215,21.4439052106031,22.7929542561335,22.9167521132897,20.9569224164552,21.7862532776328,17.1689206212697,16.8955219329356,19.4302574577404,16.4577241144999,20.4097177083238,21.6976932852062,19.1857269954674,17.2220166160055,20.0536620703273,17.7440133686589,21.3086466264653,21.8644623291837,15.7119836064167,17.3207126461294,18.5188426866059,18.415396942636,22.4658419719651,16.5899685443782,21.9833308585392,22.6913660192046,22.5614606750713,20.6591398634351,24.7062389413857,25.5054619182464
|short_description=p1@Vma21
}}
}}

Revision as of 04:54, 19 April 2012

Short description:p1@Vma21
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vma21_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000101496, ENSMUST00000114575, ENSMUST00000138979, ENSMUST00000154054, NM_001081356, uc009tkf.2_5end
EntrezGene:Vma21
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vma21

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.82
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.47
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.98
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.16
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.37
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I214.65
Ileum epithelium, pool1.CNhs13199.10252-104B918.24
Ileum epithelium, pool2.CNhs13232.10253-104C118.90
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H129.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H325.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D843.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D940.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.98
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B749.29
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C232.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B830.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C336.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C428.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C435.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.30
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.81
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C149.39
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E135.24
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C541.77
Mouse Granule cells, donor1.CNhs12131.11713-123C330.15
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C643.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D138.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C748.14
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E753.40
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D244.76
Mouse Microglia, donor1.CNhs12629.11718-123C829.06
Mouse Microglia, donor2.CNhs12634.11736-123E824.59
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.92
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D371.58
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D752.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.99
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D636.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.58
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.79
Mouse Schwann, donor1.CNhs12507.11728-123D936.65
Mouse Schwann, donor2.CNhs12573.11746-123F938.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F740.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C838.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F456.53
Mouse hepatocyte, donor8.CNhs13091.11824-124F645.70
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I735.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E330.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I843.11
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G642.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G135.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G239.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G340.44
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.78
accessory axillary lymph node, adult.CNhs10475.1063-29H935.99
adrenal gland, adult.CNhs10508.49-24D735.03
adrenal gland, embryo E14.CNhs11038.406-44C525.50
adrenal gland, embryo E16.CNhs11004.1254-43D627.40
adrenal gland, embryo E17.CNhs11043.1263-45I132.06
adrenal gland, embryo E18.CNhs11026.1262-18F533.76
adrenal gland, neonate N00.CNhs11191.1311-23C124.69
adrenal gland, neonate N25.CNhs11223.1377-27I336.07
amnion, adult pregnant day17.5.CNhs10488.583-22A811.37
aorta, adult.CNhs10498.46-23H144.54
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F527.18
bone (os femoris), neonate N16.CNhs11225.1525-43A619.88
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B250.65
cerebellum, neonate N30.CNhs11135.1395-42I246.08
colon, adult.CNhs10468.36-18H719.16
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D129.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D425.54
corpora quadrigemina, adult.CNhs10501.16-22A453.63
corpus striatum, adult.CNhs10487.19-21D846.21
corpus striatum, neonate N00.CNhs11226.630-43F135.43
cortex, adult.CNhs10473.12-14D559.27
cortex, neonate N30.CNhs11107.1392-42F260.09
diencephalon, adult.CNhs10482.20-12F254.23
diencephalon, neonate N30.CNhs11201.1388-42B250.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.69
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.02
epididymis, adult.CNhs10490.58-23B232.85
eyeball, adult.CNhs10484.31-12G436.20
eyeball, embryo E12.CNhs11016.345-16C619.78
eyeball, embryo E14.CNhs10521.399-16E226.67
eyeball, embryo E15.CNhs10593.426-16C927.73
eyeball, embryo E17.CNhs11023.1261-18D431.65
eyeball, neonate N00.CNhs11207.633-15C630.89
eyeball, neonate N01.CNhs11140.1532-43E731.39
eyeball, neonate N02.CNhs11205.1551-44G830.55
eyeball, neonate N16.CNhs11188.777-19A232.08
forelimb, embryo E11.CNhs10596.335-25E212.50
forelimb, embryo E12.CNhs10600.359-14H213.62
forelimb, embryo E13.CNhs10589.384-1E214.96
forelimb, embryo E14.CNhs10577.413-26A818.41
forelimb, embryo E15.CNhs11007.437-20E721.41
forelimb, embryo E17.CNhs10598.1517-43C419.50
forelimb, embryo E18.CNhs11008.1520-43B525.72
gonad, embryo E13.CNhs11044.1564-45I617.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.59
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.57
heart, embryo E11.CNhs10586.331-24E926.51
heart, embryo E12.CNhs11015.353-12F522.51
heart, embryo E13.CNhs11013.376-3I922.33
heart, embryo E14.CNhs10597.403-26D423.20
heart, embryo E15.CNhs11017.431-16C823.61
heart, embryo E16.CNhs11021.457-17C626.07
heart, embryo E17.CNhs11025.479-18E526.51
heart, embryo E18.CNhs11030.1283-20G331.39
heart, neonate N00.CNhs11213.639-21E323.24
heart, neonate N03.CNhs11221.1349-25I224.68
heart, neonate N10.CNhs11118.749-24G128.73
heart, neonate N16.CNhs11209.782-15G127.08
heart, neonate N20.CNhs11127.821-26I625.58
heart, neonate N25.CNhs11196.1351-25D329.86
heart, neonate N30.CNhs11202.1390-42D223.75
hippocampus, adult.CNhs10478.13-16E858.88
hippocampus, neonate N00.CNhs11228.627-43G134.88
intestinal mucosa, adult.CNhs10506.860-29I310.57
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I520.48
intestine, embryo E13.CNhs11010.381-16D515.10
intestine, embryo E15.CNhs10602.976-16D819.33
intestine, embryo E16.CNhs10585.463-22H416.34
intestine, embryo E17.CNhs10582.482-18D317.35
intestine, embryo E18.CNhs10526.1289-20F720.35
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E922.23
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F220.09
intestine, neonate N10.CNhs11098.755-23A519.11
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E315.13
intestine, neonate N30.CNhs11131.1384-42G116.13
kidney, embryo E14.CNhs10606.411-4I922.57
kidney, embryo E15.CNhs10997.434-16F816.57
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I223.01
kidney, embryo E18.CNhs11001.1288-20C719.59
kidney, neonate N00.CNhs11214.646-21G719.57
kidney, neonate N10.CNhs11206.758-6D531.18
kidney, neonate N20.CNhs11113.832-19I131.15
kidney, neonate N25.CNhs11122.1353-25F333.13
kidney, neonate N30.CNhs11203.1385-42H131.59
liver, adult pregnant day01.CNhs10466.508-5B233.20
liver, embryo E12.CNhs10601.355-15F818.69
liver, embryo E13.CNhs10524.378-3H621.42
liver, embryo E14.CNhs10594.409-16E116.64
liver, embryo E15.CNhs10520.433-16D712.17
liver, embryo E16.CNhs10523.462-17F513.75
liver, embryo E17.CNhs10510.481-18A314.77
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F415.73
liver, neonate N03.CNhs11123.1345-25G222.79
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H226.05
liver, neonate N10.CNhs11115.751-24B928.40
liver, neonate N20.CNhs11220.823-25A329.80
liver, neonate N25.CNhs11198.1368-26H137.31
liver, neonate N30.CNhs11106.1382-42D127.02
lung, adult.CNhs10474.28-22B129.93
lung, embryo E12.CNhs10522.354-16G221.60
lung, embryo E14.CNhs10604.404-26F819.23
lung, embryo E15.CNhs11020.432-17C518.16
lung, embryo E16.CNhs10998.458-17B620.18
lung, embryo E17.CNhs10605.480-44A621.78
lung, embryo E18.CNhs10583.1287-20I619.76
lung, neonate N00.CNhs11224.640-42C619.90
lung, neonate N06.CNhs11212.683-20E526.01
lung, neonate N07.CNhs11111.715-19A325.25
lung, neonate N10.CNhs11219.750-23E629.50
lung, neonate N20.CNhs11109.822-18A425.73
lung, neonate N25.CNhs11119.1359-25C733.16
lung, neonate N30.CNhs11133.1394-42H227.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A155.79
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1110.96
mammary gland, adult lactating day02.CNhs10480.595-22B640.32
mammary gland, adult pregnant day19.CNhs10476.588-5H229.25
medulla oblongata, adult.CNhs10477.17-12C257.64
medulla oblongata, neonate N30.CNhs11200.1396-42A358.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.22
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.11
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D727.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.73
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.46
olfactory brain, adult.CNhs10489.18-22I957.20
ovary, adult.CNhs10507.91-2I719.30
ovary, embryo E18.CNhs11040.505-44H715.49
ovary, neonate N00.CNhs11217.1299-22I421.66
oviduct, adult pregnant day01.CNhs10500.988-6G620.29
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F414.57
pancreas, embryo E15.CNhs11042.1556-45F217.84
pancreas, embryo E16.CNhs11003.460-26E522.07
pancreas, embryo E17.CNhs10599.1558-45G317.42
pancreas, embryo E18.CNhs10580.1535-43I727.36
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D723.27
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B628.76
pancreas, neonate N25.CNhs11094.1555-45E228.46
pancreas, neonate N30.CNhs11182.1548-44H524.75
pituitary gland, adult.CNhs10493.21-1G834.38
pituitary gland, embryo E12.CNhs11018.346-16E622.33
pituitary gland, embryo E13.CNhs11009.370-44C714.10
pituitary gland, embryo E14.CNhs11037.398-44A519.08
pituitary gland, embryo E15.CNhs10592.427-16B921.81
pituitary gland, embryo E16.CNhs11036.449-43F628.00
pituitary gland, embryo E17.CNhs11039.1265-44F527.64
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I718.77
placenta, adult pregnant day17.CNhs10464.577-18G321.61
prostate, adult.CNhs10470.859-1F825.80
skin, adult.CNhs10492.30-1C319.46
skin, neonate N00.CNhs11124.650-25G424.70
skin, neonate N03.CNhs11215.662-22H331.54
skin, neonate N06.CNhs11097.693-20I525.90
skin, neonate N10.CNhs11108.762-6C424.29
small intestine, neonate N16.CNhs11114.790-21I117.49
spinal cord, adult.CNhs10505.24-13C966.38
spleen, adult.CNhs10465.25-2G214.18
spleen, embryo E16.CNhs11035.461-43C117.34
spleen, embryo E18.CNhs11011.1271-21F218.89
spleen, neonate N10.CNhs11116.752-24D115.07
spleen, neonate N20.CNhs11112.824-19H116.27
spleen, neonate N25.CNhs11099.1354-25G316.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C921.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D324.88
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E321.99
stomach, embryo E15.CNhs10603.1252-16G819.72
stomach, embryo E16.CNhs11022.459-17D423.55
stomach, embryo E17.CNhs11006.1035-18D521.95
stomach, embryo E18.CNhs10999.1286-20C624.24
stomach, neonate N03.CNhs11193.1340-24B825.89
stomach, neonate N07.CNhs11210.718-18A918.60
stomach, neonate N25.CNhs11104.1355-25E421.46
stomach, neonate N30.CNhs11134.1386-42I119.96
submandibular gland, adult.CNhs10469.59-29C132.93
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F516.90
testis, embryo E15.CNhs11034.443-27C518.37
testis, embryo E16.CNhs11033.470-26G518.28
testis, embryo E17.CNhs11029.486-18I517.82
testis, embryo E18.CNhs11027.503-18G521.63
testis, neonate N00.CNhs11189.1300-22B716.90
testis, neonate N07.CNhs11222.726-26I418.23
testis, neonate N10.CNhs11204.763-44D918.56
testis, neonate N20.CNhs11110.839-18H38.94
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B519.91
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I220.34
thymus, embryo E16.CNhs11002.456-26C518.45
thymus, embryo E17.CNhs10581.478-18C116.47
thymus, embryo E18.CNhs10595.1273-19G418.68
thymus, neonate N02.CNhs11181.1541-43F820.43
thymus, neonate N03.CNhs11137.2104-43C718.17
thymus, neonate N06.CNhs11197.681-26C420.70
thymus, neonate N07.CNhs11211.713-19D320.35
thymus, neonate N10.CNhs11194.748-24E421.78
thymus, neonate N20.CNhs11186.820-7A219.30
thymus, neonate N25.CNhs11125.1362-25G720.69
thymus, neonate N30.CNhs11132.1393-42G220.57
tongue, adult.CNhs10499.32-1B419.50
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.45
urinary bladder, adult.CNhs10481.879-12E428.40
uterus, adult pregnant day19.CNhs10497.590-15F529.09
uterus, adult.CNhs10509.92-27E518.32
vagina, adult.CNhs10502.89-27D519.94
vesicular gland, adult.CNhs10491.51-27F826.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A147.44
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A255.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A351.56
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D764.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A746.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A953.33
whole body, embryo E11.CNhs11014.324-5I812.66
whole body, embryo E12.CNhs10587.857-27C922.35
whole body, embryo E13.CNhs10512.372-23H216.73
whole body, embryo E14.5.CNhs10578.420-27D218.48
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F210.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.44
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.47
whole body, embryo E17.5.CNhs10513.490-9F916.59
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B322.69
whole body, neonate N00.CNhs10525.657-19C222.56
whole body, neonate N01.CNhs10576.659-23C620.66
whole body, neonate N06.CNhs10515.692-21D124.71
whole body, neonate N10.CNhs10518.761-6B425.51





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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