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FFCP PHASE1:Mm9::chr7:25688030..25688099,+: Difference between revisions

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|description=CAGE_peak_1_at_Arhgef1_5end
|description=CAGE_peak_1_at_Arhgef1_5end
|id=chr7:25688030..25688099,+
|id=chr7:25688030..25688099,+
|ontology_enrichment_celltype=CL:0000988!9.23e-10!32;CL:0002032!9.23e-10!32;CL:0000037!9.23e-10!32;CL:0000566!9.23e-10!32;CL:0000837!9.23e-10!32;CL:0002031!1.14e-08!25;CL:0000738!3.66e-08!17;CL:0002087!3.66e-08!17;CL:0000838!1.03e-07!12;CL:0002320!4.11e-07!46;CL:0000134!4.11e-07!46;CL:0000084!4.28e-07!11;CL:0000827!4.28e-07!11;CL:0000542!6.54e-07!13;CL:0000051!6.54e-07!13
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=16.9757777931082,21.287499866001,24.5699589270349,26.0119221723874,18.0322462780685,19.809754085603,22.4268134971705,437.211573173177,115.869118330822,148.865038740788,41.9484022152487,34.38180052699,407.286536506338,521.46270042932,49.9664642723494,54.668322195253,25.1842276126133,211.517381872698,194.839610153755,186.731446791133,30.8707143248383,68.0143015726064,47.5383616232862,33.9183936322022,30.7408436630008,14.3557991028755,14.2151458732495,15.9448712187558,12.5415456841207,16.8860186939154,11.9734475753865,18.4158895303293,25.2176562909674,0,9.82095507154334,7.81302833184914,11.2293145944303,295.901862930994,170.331105106188,161.768836887904,241.174910092716,241.115056190331,232.073948748891,19.2622131502633,23.1139403180493,23.1268907723719,56.3321767930588,21.1484401689033,19.552070263368,20.4151394027998,31.7769177089573,18.6878333674463,198.822388178418,424.336853076636,355.587239492727,32.1574295044934,33.8109459127733,34.5500301825886,4.24864567805155,7.40587370980846,8.23980824558033,31.1736969503602,31.1253178638899,90.4399215867806,90.9757053561617,88.0995342533164,44.6404164672423,29.9690278150813,15.4497522339632,14.5806413398226,14.302097371894,8.85518051651791,8.83474163806454,10.656699531701,12.8432931164437,11.9498442259303,3.30347642998166,4.97980618532232,5.83704826373725,6.98997324970027,6.67859798297591,5.2091337055676,4.18774498502071,9.56696437053856,6.87592114995646,8.83885756421003,11.9592211871246,7.82877672466262,18.5529173666301,25.9210451166274,71.3066642206127,37.858650587181,2.719885334831,7.55584468292944,11.0461990966104,11.2006721774334,29.6337726477996,15.8500199997594,12.4697282209377,11.6602059588412,18.3096445709685,14.115912515575,22.9324715735981,49.7746692207332,23.1645413881999,20.0154293725328,27.2983200307983,31.0580152835843,128.951066056292,25.0867215019554,23.7674897669606,15.2232739156071,19.602317266765,17.0316583824463,27.3981687626192,23.7509857613087,43.5063143212498,40.0540218668155,88.4610551949874,39.4711113871678,53.0019644304944,46.0631490478461,11.1835056730873,9.07620470735796,12.3573557019938,25.034791410442,46.4882683082971,37.7938720525847,33.9277506285083,9.73639156131348,7.32000964509802,12.5654352112864,10.4294592115366,9.71718737855256,10.389402227978,7.94982189032012,30.8573272466458,50.0116021852574,11.8779696463827,11.3638602178696,12.2313216384941,9.42598628177239,12.9644733459851,14.1662528765572,21.5675702309709,17.935920839879,16.9600121453109,18.8853460639481,21.1256633074185,20.6125627382923,27.448375369576,30.0298153425778,26.4144886764318,30.6461906539507,32.1020132796392,21.8937693500343,34.4084461783485,34.9993153676013,42.3403614099433,27.1334762021507,23.2180799381285,20.7071370680167,29.3563472125661,24.7922932001729,22.6772655944446,22.0907247512887,27.3638869427612,29.4248662765267,25.1776570367625,31.027650710949,30.5629411987876,30.8481973467451,31.1761163713292,32.7463661775307,12.4071069652835,15.4356918568927,20.4859645449955,11.3713743665324,20.6889603019177,25.3137972327878,20.747661272857,24.6053900040478,19.7916459021935,14.8375988367796,26.0990983849481,12.5171205590248,20.8608223304224,26.0632978373908,23.2007263671753,27.8634016682809,18.1555961894743,24.0960940637784,18.3977863924489,17.4800224292885,18.0332377076929,18.7359221617689,23.4682509472827,29.5973159937144,29.4049897627796,21.6986917530015,19.3108435244891,20.6073263749407,16.8977997439675,17.685581205906,16.9040735797355,16.6397963164792,19.6774317746848,23.3941844959844,24.4440817710163,31.93427125704,35.6697498905078,21.4157902286704,25.8782771749238,33.8648262378338,29.0195035996541,20.4588891137161,15.0693827358406,27.9817242390753,85.3559738569714,13.0749074121634,23.3039916312097,25.292017780503,34.9688469949868,48.4093084006848,48.7989463816328,83.1269339874223,62.738787354264,65.7750128256861,80.524658172031,74.3939448809451,78.9170367127143,76.5193519896196,81.427293327207,92.4639662491806,29.0140921081231,31.1808523324348,10.9174401191699,10.0802050469295,15.2459499200308,27.5193310652767,29.3422644057119,23.4263246577983,33.3906266485838,35.1284132990251,33.6425997864415,39.3476377796477,35.2185310457158,30.9791209385991,30.8324466798288,9.96096080907602,27.5363765304041,27.7782341720918,26.8763482933401,40.2527100052987,21.2392221343941,19.9080121647085,16.3254720760966,19.8035333743693,23.9194533233426,28.2840336108413,31.528251766523,33.808636841408,31.3717692978555,32.2357493094532,21.0837217149998,19.5957532171555,20.7668159509811,17.4659261210371,28.2001930646405,23.148399783412,26.0690143454142,26.9336914579127,26.1632942757372,26.4884505729701,31.6806805886009,34.104963409075,12.7906470871878,44.1895157883166,41.1734288074559,33.3530474852702,33.3048839768751,34.962011645698,29.1480836629851,10.9400928186201,83.2141189485543,51.5967169908056,45.3726592055794,45.0200612241212,68.4838080882336,72.9802372528807,53.0332701580829,55.7006780248159,58.8731888406845,20.0480829783174,24.1997035089569,25.61825285798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|phase1_expression=16.9757777931082,21.287499866001,24.5699589270349,26.0119221723874,18.0322462780685,19.809754085603,22.4268134971705,437.211573173177,115.869118330822,148.865038740788,41.9484022152487,34.38180052699,407.286536506338,521.46270042932,49.9664642723494,54.668322195253,25.1842276126133,211.517381872698,194.839610153755,186.731446791133,30.8707143248383,68.0143015726064,47.5383616232862,33.9183936322022,30.7408436630008,14.3557991028755,14.2151458732495,15.9448712187558,12.5415456841207,16.8860186939154,11.9734475753865,18.4158895303293,25.2176562909674,0,9.82095507154334,7.81302833184914,11.2293145944303,295.901862930994,170.331105106188,161.768836887904,241.174910092716,241.115056190331,232.073948748891,19.2622131502633,23.1139403180493,23.1268907723719,56.3321767930588,21.1484401689033,19.552070263368,20.4151394027998,31.7769177089573,18.6878333674463,198.822388178418,424.336853076636,355.587239492727,32.1574295044934,33.8109459127733,34.5500301825886,4.24864567805155,7.40587370980846,8.23980824558033,31.1736969503602,31.1253178638899,90.4399215867806,90.9757053561617,88.0995342533164,44.6404164672423,29.9690278150813,15.4497522339632,14.5806413398226,14.302097371894,8.85518051651791,8.83474163806454,10.656699531701,12.8432931164437,11.9498442259303,3.30347642998166,4.97980618532232,5.83704826373725,6.98997324970027,6.67859798297591,5.2091337055676,4.18774498502071,9.56696437053856,6.87592114995646,8.83885756421003,11.9592211871246,7.82877672466262,18.5529173666301,25.9210451166274,71.3066642206127,37.858650587181,2.719885334831,7.55584468292944,11.0461990966104,11.2006721774334,29.6337726477996,15.8500199997594,12.4697282209377,11.6602059588412,18.3096445709685,14.115912515575,22.9324715735981,49.7746692207332,23.1645413881999,20.0154293725328,27.2983200307983,31.0580152835843,128.951066056292,25.0867215019554,23.7674897669606,15.2232739156071,19.602317266765,17.0316583824463,27.3981687626192,23.7509857613087,43.5063143212498,40.0540218668155,88.4610551949874,39.4711113871678,53.0019644304944,46.0631490478461,11.1835056730873,9.07620470735796,12.3573557019938,25.034791410442,46.4882683082971,37.7938720525847,33.9277506285083,9.73639156131348,7.32000964509802,12.5654352112864,10.4294592115366,9.71718737855256,10.389402227978,7.94982189032012,30.8573272466458,50.0116021852574,11.8779696463827,11.3638602178696,12.2313216384941,9.42598628177239,12.9644733459851,14.1662528765572,21.5675702309709,17.935920839879,16.9600121453109,18.8853460639481,21.1256633074185,20.6125627382923,27.448375369576,30.0298153425778,26.4144886764318,30.6461906539507,32.1020132796392,21.8937693500343,34.4084461783485,34.9993153676013,42.3403614099433,27.1334762021507,23.2180799381285,20.7071370680167,29.3563472125661,24.7922932001729,22.6772655944446,22.0907247512887,27.3638869427612,29.4248662765267,25.1776570367625,31.027650710949,30.5629411987876,30.8481973467451,31.1761163713292,32.7463661775307,12.4071069652835,15.4356918568927,20.4859645449955,11.3713743665324,20.6889603019177,25.3137972327878,20.747661272857,24.6053900040478,19.7916459021935,14.8375988367796,26.0990983849481,12.5171205590248,20.8608223304224,26.0632978373908,23.2007263671753,27.8634016682809,18.1555961894743,24.0960940637784,18.3977863924489,17.4800224292885,18.0332377076929,18.7359221617689,23.4682509472827,29.5973159937144,29.4049897627796,21.6986917530015,19.3108435244891,20.6073263749407,16.8977997439675,17.685581205906,16.9040735797355,16.6397963164792,19.6774317746848,23.3941844959844,24.4440817710163,31.93427125704,35.6697498905078,21.4157902286704,25.8782771749238,33.8648262378338,29.0195035996541,20.4588891137161,15.0693827358406,27.9817242390753,85.3559738569714,13.0749074121634,23.3039916312097,25.292017780503,34.9688469949868,48.4093084006848,48.7989463816328,83.1269339874223,62.738787354264,65.7750128256861,80.524658172031,74.3939448809451,78.9170367127143,76.5193519896196,81.427293327207,92.4639662491806,29.0140921081231,31.1808523324348,10.9174401191699,10.0802050469295,15.2459499200308,27.5193310652767,29.3422644057119,23.4263246577983,33.3906266485838,35.1284132990251,33.6425997864415,39.3476377796477,35.2185310457158,30.9791209385991,30.8324466798288,9.96096080907602,27.5363765304041,27.7782341720918,26.8763482933401,40.2527100052987,21.2392221343941,19.9080121647085,16.3254720760966,19.8035333743693,23.9194533233426,28.2840336108413,31.528251766523,33.808636841408,31.3717692978555,32.2357493094532,21.0837217149998,19.5957532171555,20.7668159509811,17.4659261210371,28.2001930646405,23.148399783412,26.0690143454142,26.9336914579127,26.1632942757372,26.4884505729701,31.6806805886009,34.104963409075,12.7906470871878,44.1895157883166,41.1734288074559,33.3530474852702,33.3048839768751,34.962011645698,29.1480836629851,10.9400928186201,83.2141189485543,51.5967169908056,45.3726592055794,45.0200612241212,68.4838080882336,72.9802372528807,53.0332701580829,55.7006780248159,58.8731888406845,20.0480829783174,24.1997035089569,25.61825285798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|short_description=p1@Arhgef1
|short_description=p1@Arhgef1
}}
}}

Revision as of 03:34, 19 April 2012

Short description:p1@Arhgef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgef1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000047873, ENSMUST00000098683, ENSMUST00000108423, ENSMUST00000108424, ENSMUST00000127761, ENSMUST00000129383_5end
EntrezGene:Arhgef1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.57
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.81
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.43
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9437.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7115.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2148.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E641.95
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4407.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8521.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A149.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A354.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2211.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4194.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6186.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A330.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H268.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I947.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D133.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D230.74
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I215.94
Ileum epithelium, pool1.CNhs13199.10252-104B912.54
Ileum epithelium, pool2.CNhs13232.10253-104C116.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G625.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8295.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1170.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3161.77
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9241.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2241.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4232.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.13
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B756.33
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.15
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.55
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C431.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2198.82
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9424.34
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1355.59
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C132.16
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.81
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C534.55
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C631.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D131.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C790.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E790.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D288.10
Mouse Microglia, donor1.CNhs12629.11718-123C844.64
Mouse Microglia, donor2.CNhs12634.11736-123E829.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.84
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D918.55
Mouse Schwann, donor2.CNhs12573.11746-123F925.92
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G371.31
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A729.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G327.30
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B631.06
accessory axillary lymph node, adult.CNhs10475.1063-29H9128.95
adrenal gland, adult.CNhs10508.49-24D725.09
adrenal gland, embryo E14.CNhs11038.406-44C523.77
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I119.60
adrenal gland, embryo E18.CNhs11026.1262-18F517.03
adrenal gland, neonate N00.CNhs11191.1311-23C127.40
adrenal gland, neonate N25.CNhs11223.1377-27I323.75
amnion, adult pregnant day17.5.CNhs10488.583-22A843.51
aorta, adult.CNhs10498.46-23H140.05
bone (os femoris), adult.CNhs10483.56-12G288.46
bone (os femoris), neonate N02.CNhs11227.1985-43F539.47
bone (os femoris), neonate N16.CNhs11225.1525-43A653.00
bone (os femoris), neonate N20.CNhs11195.1350-25C346.06
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H725.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C746.49
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D137.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D433.93
corpora quadrigemina, adult.CNhs10501.16-22A49.74
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F112.57
cortex, adult.CNhs10473.12-14D510.43
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B27.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A250.01
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C612.23
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C912.96
eyeball, embryo E17.CNhs11023.1261-18D414.17
eyeball, neonate N00.CNhs11207.633-15C621.57
eyeball, neonate N01.CNhs11140.1532-43E717.94
eyeball, neonate N02.CNhs11205.1551-44G816.96
eyeball, neonate N16.CNhs11188.777-19A218.89
forelimb, embryo E11.CNhs10596.335-25E221.13
forelimb, embryo E12.CNhs10600.359-14H220.61
forelimb, embryo E13.CNhs10589.384-1E227.45
forelimb, embryo E14.CNhs10577.413-26A830.03
forelimb, embryo E15.CNhs11007.437-20E726.41
forelimb, embryo E17.CNhs10598.1517-43C430.65
forelimb, embryo E18.CNhs11008.1520-43B532.10
gonad, embryo E13.CNhs11044.1564-45I621.89
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D235.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D542.34
heart, embryo E11.CNhs10586.331-24E927.13
heart, embryo E12.CNhs11015.353-12F523.22
heart, embryo E13.CNhs11013.376-3I920.71
heart, embryo E14.CNhs10597.403-26D429.36
heart, embryo E15.CNhs11017.431-16C824.79
heart, embryo E16.CNhs11021.457-17C622.68
heart, embryo E17.CNhs11025.479-18E522.09
heart, embryo E18.CNhs11030.1283-20G327.36
heart, neonate N00.CNhs11213.639-21E329.42
heart, neonate N03.CNhs11221.1349-25I225.18
heart, neonate N10.CNhs11118.749-24G131.03
heart, neonate N16.CNhs11209.782-15G130.56
heart, neonate N20.CNhs11127.821-26I630.85
heart, neonate N25.CNhs11196.1351-25D331.18
heart, neonate N30.CNhs11202.1390-42D232.75
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G115.44
intestinal mucosa, adult.CNhs10506.860-29I320.49
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I520.69
intestine, embryo E13.CNhs11010.381-16D525.31
intestine, embryo E15.CNhs10602.976-16D820.75
intestine, embryo E16.CNhs10585.463-22H424.61
intestine, embryo E17.CNhs10582.482-18D319.79
intestine, embryo E18.CNhs10526.1289-20F714.84
intestine, neonate N00.CNhs11126.644-26D126.10
intestine, neonate N01.CNhs11192.1322-23E912.52
intestine, neonate N06.CNhs11102.688-20B820.86
intestine, neonate N07.CNhs11095.720-20F226.06
intestine, neonate N10.CNhs11098.755-23A523.20
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E318.16
intestine, neonate N30.CNhs11131.1384-42G124.10
kidney, embryo E14.CNhs10606.411-4I918.40
kidney, embryo E15.CNhs10997.434-16F817.48
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I218.74
kidney, embryo E18.CNhs11001.1288-20C723.47
kidney, neonate N00.CNhs11214.646-21G729.60
kidney, neonate N10.CNhs11206.758-6D529.40
kidney, neonate N20.CNhs11113.832-19I121.70
kidney, neonate N25.CNhs11122.1353-25F319.31
kidney, neonate N30.CNhs11203.1385-42H120.61
liver, adult pregnant day01.CNhs10466.508-5B216.90
liver, embryo E12.CNhs10601.355-15F817.69
liver, embryo E13.CNhs10524.378-3H616.90
liver, embryo E14.CNhs10594.409-16E116.64
liver, embryo E15.CNhs10520.433-16D719.68
liver, embryo E16.CNhs10523.462-17F523.39
liver, embryo E17.CNhs10510.481-18A324.44
liver, embryo E18.CNhs10579.499-43G431.93
liver, neonate N00.CNhs11117.641-24F435.67
liver, neonate N03.CNhs11123.1345-25G221.42
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B929.02
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H115.07
liver, neonate N30.CNhs11106.1382-42D127.98
lung, adult.CNhs10474.28-22B185.36
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F823.30
lung, embryo E15.CNhs11020.432-17C525.29
lung, embryo E16.CNhs10998.458-17B634.97
lung, embryo E17.CNhs10605.480-44A648.41
lung, embryo E18.CNhs10583.1287-20I648.80
lung, neonate N00.CNhs11224.640-42C683.13
lung, neonate N06.CNhs11212.683-20E562.74
lung, neonate N07.CNhs11111.715-19A365.78
lung, neonate N10.CNhs11219.750-23E680.52
lung, neonate N20.CNhs11109.822-18A474.39
lung, neonate N25.CNhs11119.1359-25C778.92
lung, neonate N30.CNhs11133.1394-42H276.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A181.43
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A192.46
mammary gland, adult lactating day02.CNhs10480.595-22B629.01
mammary gland, adult pregnant day19.CNhs10476.588-5H231.18
medulla oblongata, adult.CNhs10477.17-12C210.92
medulla oblongata, neonate N30.CNhs11200.1396-42A310.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E223.43
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E333.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D735.13
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D833.64
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.35
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.83
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I727.54
ovary, embryo E18.CNhs11040.505-44H727.78
ovary, neonate N00.CNhs11217.1299-22I426.88
oviduct, adult pregnant day01.CNhs10500.988-6G640.25
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F419.91
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E519.80
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I728.28
pancreas, neonate N00.CNhs11105.645-26G931.53
pancreas, neonate N01.CNhs11138.1531-43D733.81
pancreas, neonate N02.CNhs11139.1539-43D831.37
pancreas, neonate N16.CNhs11136.787-43B632.24
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G820.77
pituitary gland, embryo E12.CNhs11018.346-16E617.47
pituitary gland, embryo E13.CNhs11009.370-44C728.20
pituitary gland, embryo E14.CNhs11037.398-44A523.15
pituitary gland, embryo E15.CNhs10592.427-16B926.07
pituitary gland, embryo E16.CNhs11036.449-43F626.93
pituitary gland, embryo E17.CNhs11039.1265-44F526.16
pituitary gland, neonate N00.CNhs11190.1308-22E926.49
placenta, adult pregnant day10.CNhs10472.539-13I731.68
placenta, adult pregnant day17.CNhs10464.577-18G334.10
prostate, adult.CNhs10470.859-1F812.79
skin, adult.CNhs10492.30-1C344.19
skin, neonate N00.CNhs11124.650-25G441.17
skin, neonate N03.CNhs11215.662-22H333.35
skin, neonate N06.CNhs11097.693-20I533.30
skin, neonate N10.CNhs11108.762-6C434.96
small intestine, neonate N16.CNhs11114.790-21I129.15
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G283.21
spleen, embryo E16.CNhs11035.461-43C151.60
spleen, embryo E18.CNhs11011.1271-21F245.37
spleen, neonate N10.CNhs11116.752-24D145.02
spleen, neonate N20.CNhs11112.824-19H168.48
spleen, neonate N25.CNhs11099.1354-25G372.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C653.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C955.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D358.87
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E324.20
stomach, embryo E15.CNhs10603.1252-16G825.62
stomach, embryo E16.CNhs11022.459-17D422.79
stomach, embryo E17.CNhs11006.1035-18D523.42
stomach, embryo E18.CNhs10999.1286-20C620.09
stomach, neonate N03.CNhs11193.1340-24B821.98
stomach, neonate N07.CNhs11210.718-18A930.09
stomach, neonate N25.CNhs11104.1355-25E422.77
stomach, neonate N30.CNhs11134.1386-42I123.46
submandibular gland, adult.CNhs10469.59-29C129.20
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F520.93
testis, embryo E15.CNhs11034.443-27C519.36
testis, embryo E16.CNhs11033.470-26G525.28
testis, embryo E17.CNhs11029.486-18I520.54
testis, embryo E18.CNhs11027.503-18G522.13
testis, neonate N00.CNhs11189.1300-22B726.29
testis, neonate N07.CNhs11222.726-26I425.52
testis, neonate N10.CNhs11204.763-44D914.79
testis, neonate N20.CNhs11110.839-18H311.35
testis, neonate N30.CNhs11130.1391-42E213.54
thymus, adult.CNhs10471.38-12B5177.60
thymus, embryo E14.CNhs11041.402-44I426.35
thymus, embryo E15.CNhs11005.430-45I234.61
thymus, embryo E16.CNhs11002.456-26C552.36
thymus, embryo E17.CNhs10581.478-18C185.22
thymus, embryo E18.CNhs10595.1273-19G498.94
thymus, neonate N02.CNhs11181.1541-43F8136.18
thymus, neonate N03.CNhs11137.2104-43C7147.98
thymus, neonate N06.CNhs11197.681-26C4134.69
thymus, neonate N07.CNhs11211.713-19D3158.51
thymus, neonate N10.CNhs11194.748-24E4162.03
thymus, neonate N20.CNhs11186.820-7A2196.09
thymus, neonate N25.CNhs11125.1362-25G7204.64
thymus, neonate N30.CNhs11132.1393-42G2218.33
tongue, adult.CNhs10499.32-1B423.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.09
urinary bladder, adult.CNhs10481.879-12E424.54
uterus, adult pregnant day19.CNhs10497.590-15F533.97
uterus, adult.CNhs10509.92-27E524.54
vagina, adult.CNhs10502.89-27D527.01
vesicular gland, adult.CNhs10491.51-27F825.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I814.95
whole body, embryo E12.CNhs10587.857-27C923.94
whole body, embryo E13.CNhs10512.372-23H221.00
whole body, embryo E14.5.CNhs10578.420-27D225.04
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F223.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.92
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G533.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G533.38
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.30
whole body, embryo E17.5.CNhs10513.490-9F929.51
whole body, embryo E17.CNhs10517.475-3I523.23
whole body, embryo E18.CNhs10516.493-3B330.18
whole body, neonate N00.CNhs10525.657-19C239.32
whole body, neonate N01.CNhs10576.659-23C643.61
whole body, neonate N06.CNhs10515.692-21D139.04
whole body, neonate N10.CNhs10518.761-6B428.75





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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