Personal tools

FFCP PHASE1:Mm9::chr9:66440779..66440792,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:66440779..66440792,-
|short_description=p3@Usp3
|description=CAGE_peak_3_at_Usp3_5end
|association_with_transcript=0bp_to_NM_144937,uc009qey.1,uc009qez.1,uc012gvp.1_5end
|EntrezGene=235441
|EntrezGene=235441
|HGNC=
|HGNC=
|UniProt=Q91W36,Q3TT00
|UniProt=Q91W36,Q3TT00
|association_with_transcript=0bp_to_NM_144937,uc009qey.1,uc009qez.1,uc012gvp.1_5end
|description=CAGE_peak_3_at_Usp3_5end
|id=chr9:66440779..66440792,-
|ontology_enrichment_disease=
|phase1_expression=1.44133962394315,4.53668029931169,4.09499315450582,9.98131897312539,8.01433167914156,5.70789524500425,4.20502753071946,11.1046058159756,3.94208422024667,4.91535505276186,4.10923123741212,2.95156988282745,15.7504671536709,10.5778686926987,2.99798785634096,2.22722794128809,2.09868563438444,7.72882305127682,7.26706498110415,3.81950686618227,3.06155844543851,5.65958421845046,4.4403964153619,4.95976510659561,4.12936705920906,2.29692785646008,5.1691439539089,7.75696437669201,3.42042155021473,7.56090389279792,4.43461021310609,3.17515336729816,9.22597181376855,0,6.06588401477677,5.31950865147176,4.28755648150975,7.53356935326434,7.813353445238,7.85285615960697,7.64700934440319,5.46436387966757,6.311634589405,0.503587271902309,2.12891555560981,1.65192076945513,0,1.09012578190223,0.659058548203415,2.3331587888914,1.81982348112971,1.43752564364972,4.69791296961662,10.1550699881588,11.7632829699862,2.05807548828758,2.0057340795713,1.54701627683233,7.28339259094552,3.1739458756322,8.87363964908651,2.71075625655306,0,1.7997994345628,0,0.7104801149461,0.299600110518405,0.768436610643109,8.70992743391212,8.23536223823313,9.25429829946081,1.42825492201902,3.3130281142742,6.85948475603743,7.85932862349538,11.0306254393203,1.10115880999389,1.27687338085188,1.0752457327937,5.53922408466814,5.48925861614458,4.16730696445408,0.837548997004143,1.68828783009504,0.916789486660861,1.47314292736834,3.27454865837937,4.47358669980721,2.34751199332871,2.11600368298999,8.40607017234866,3.44169550792555,4.75979933595425,1.61910957491345,3.24888208723835,2.24013443548668,0.983110940922263,1.70430322578058,1.29893002301434,1.41335829804136,2.81686839553361,2.56652954828636,12.7402619853323,7.11066703153331,3.68034769719064,2.28023878927589,2.52762222507392,3.53970027129086,8.2860122767095,3.41416919849097,1.90833859442749,1.52232739156071,1.84492397804847,2.11011696773672,1.76383060703557,2.76466500925286,2.22475470960936,3.18118585223806,0.884610551949874,3.23533699894818,4.41683036920787,3.39412677194655,0,7.31951992528868,7.12118803165747,4.85368404896324,4.79260498023681,5.39912457894067,2.54140454146129,1.04853447583376,2.74500361691176,3.26701315493447,0.521472960576829,0.511430914660661,1.66230435647648,1.94689515681309,3.36069900706044,4.97627882440372,3.53811861807145,5.05060454127538,4.42409506073193,5.74755261083682,4.86167750474443,3.91832526372859,5.17077393550092,4.22775276940004,4.8724896771059,3.3631438196072,7.97601573851516,7.37513712654495,4.57472922826267,5.04150184583422,2.78047249225598,5.57203466435466,3.70407845534298,3.78165106955137,5.61770549850588,5.66165395652373,5.11494298912067,4.97101854085205,5.39409937956521,3.42117916775928,4.26140524053378,3.93528463494808,2.93107514486019,4.88321283975857,4.02410102099429,6.07179780309281,3.94943639792353,3.2833492815819,3.64809642956351,2.77779976108131,3.51280184465681,2.41571553768669,1.05144974282064,2.57261530948211,8.92130714056255,3.43785736662608,4.90562976231038,4.64473343720877,5.92790322081629,5.84882221407693,5.78182913996663,5.1360919050391,6.64340686162316,3.29397909448022,2.76468729680296,4.77495532898762,6.23885078781184,5.39291645192533,5.18731319699266,5.57595565112228,6.82804443431094,3.77020091612105,7.88954149711563,3.46207257337034,3.10323979468201,4.9095073923223,4.23684798732524,4.87113488332687,3.61097074035162,3.08492909804501,2.37162101669719,3.33690211432188,2.55526693647164,2.69834534861824,2.43432145666204,0.964708639009667,3.31013607315846,4.02774592431135,2.59416362840057,2.19649130550465,0,1.48856379067401,2.18426371180192,2.52578877947112,3.76734568396016,5.30687873499704,3.51031061316549,4.54779388249163,4.4000543639347,3.22515662972857,4.22442446919304,4.35516269348721,6.66522194480839,4.87834119644497,5.67486518782288,4.4292937929755,5.26200736569707,2.29408640602033,3.10832967358612,4.05017364028232,3.01582567878545,2.17562273527484,3.44234991113325,4.96686143348518,0.642202359951168,1.05490517932983,0.983609672260053,4.54447668967871,6.31016438832513,5.85658116444958,7.97066571611356,5.4962823529087,5.79276552614225,11.0399847007645,10.5250782435473,4.9683495844923,8.69633111482352,6.42642632843614,8.23252494207958,3.02711526234334,3.58351310577867,3.95928295134085,6.63725691699814,3.39892890616974,2.41858845571801,3.20628635585027,2.06711325016541,3.68922177532713,5.94385074286909,6.90714086007261,2.49548164869305,4.42451461110142,5.27093042874994,3.09406629744561,2.7235168460303,3.96134406868882,2.97524972700335,4.92975180572662,3.3694644392032,3.38900753443934,3.29098041204242,3.65357938937519,2.3467170806371,2.1183207086382,3.96951116498931,5.7710188529518,3.71368181400583,4.58378229453985,4.65552141612232,5.41664969158702,4.37221254944776,1.66882771809459,3.07567585436135,4.12773735926445,2.40752885580625,1.88368457004691,2.59719032669948,4.57556346413045,6.28920190977265,5.87796099759364,5.11339903076368,3.81868247206045,7.27572785236611,6.30290348093231,3.56417624711944,5.43629569637619,3.27543845619266,3.37160865962052,4.62859352061881,4.71160695571253,6.22151871800606,9.32008969630389,0.56369293868419,4.03694674318743,2.64733584731356,1.94451188344048,2.58319646955462,3.8859908862879,3.16864544343536,4.03633593016245,6.60613869881978,1.69108884578204,1.44015003128933,12.0084225838708,2.8381530140623,4.00572732942826,4.80707045017842,10.025494957379,12.9142880607822,9.73583141111748,12.2582307554899,12.0150075438296,12.421709484765,11.8974898461472,13.7415611843051,12.6999630965235,16.4796432076012,4.30787728868902,4.88369097422942,2.42227412845584,2.51826924546118,3.67060228661162,4.129014459926,4.57879060668163,4.28736758158132,5.517293144389,0,1.84130094602871,2.29158205375759,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,2.71885445390523,1.55328093525546,4.77421798887213,5.58634822761443,4.43907374960749,2.43106717068294,3.14419743941973,4.41224420280034,1.77797382241292,1.64828045791115,3.53011130550997,4.04315538822076,3.8021894983536,4.33840585187975,3.83930180626518,3.64943368707755,3.79074095107048,5.23923060411381,4.1718357340148,3.6652751888104,1.23625770240992,4.56316652416632,5.14303878578123,3.19456451086807,3.81497903915713,2.32554266611726,3.3879376949519,4.14611578669215,3.84148743032822,4.73525480588117,4.20992752922171,5.61142271657738,3.79632057997357,4.53120618927592,4.09231043169689,4.49316839439301,3.85813221962283,3.74715866906919,3.50897412668113,4.94203424311086,2.29545998482612,3.75005412503176,2.78241402744506
|phase1_expression=1.44133962394315,4.53668029931169,4.09499315450582,9.98131897312539,8.01433167914156,5.70789524500425,4.20502753071946,11.1046058159756,3.94208422024667,4.91535505276186,4.10923123741212,2.95156988282745,15.7504671536709,10.5778686926987,2.99798785634096,2.22722794128809,2.09868563438444,7.72882305127682,7.26706498110415,3.81950686618227,3.06155844543851,5.65958421845046,4.4403964153619,4.95976510659561,4.12936705920906,2.29692785646008,5.1691439539089,7.75696437669201,3.42042155021473,7.56090389279792,4.43461021310609,3.17515336729816,9.22597181376855,0,6.06588401477677,5.31950865147176,4.28755648150975,7.53356935326434,7.813353445238,7.85285615960697,7.64700934440319,5.46436387966757,6.311634589405,0.503587271902309,2.12891555560981,1.65192076945513,0,1.09012578190223,0.659058548203415,2.3331587888914,1.81982348112971,1.43752564364972,4.69791296961662,10.1550699881588,11.7632829699862,2.05807548828758,2.0057340795713,1.54701627683233,7.28339259094552,3.1739458756322,8.87363964908651,2.71075625655306,0,1.7997994345628,0,0.7104801149461,0.299600110518405,0.768436610643109,8.70992743391212,8.23536223823313,9.25429829946081,1.42825492201902,3.3130281142742,6.85948475603743,7.85932862349538,11.0306254393203,1.10115880999389,1.27687338085188,1.0752457327937,5.53922408466814,5.48925861614458,4.16730696445408,0.837548997004143,1.68828783009504,0.916789486660861,1.47314292736834,3.27454865837937,4.47358669980721,2.34751199332871,2.11600368298999,8.40607017234866,3.44169550792555,4.75979933595425,1.61910957491345,3.24888208723835,2.24013443548668,0.983110940922263,1.70430322578058,1.29893002301434,1.41335829804136,2.81686839553361,2.56652954828636,12.7402619853323,7.11066703153331,3.68034769719064,2.28023878927589,2.52762222507392,3.53970027129086,8.2860122767095,3.41416919849097,1.90833859442749,1.52232739156071,1.84492397804847,2.11011696773672,1.76383060703557,2.76466500925286,2.22475470960936,3.18118585223806,0.884610551949874,3.23533699894818,4.41683036920787,3.39412677194655,0,7.31951992528868,7.12118803165747,4.85368404896324,4.79260498023681,5.39912457894067,2.54140454146129,1.04853447583376,2.74500361691176,3.26701315493447,0.521472960576829,0.511430914660661,1.66230435647648,1.94689515681309,3.36069900706044,4.97627882440372,3.53811861807145,5.05060454127538,4.42409506073193,5.74755261083682,4.86167750474443,3.91832526372859,5.17077393550092,4.22775276940004,4.8724896771059,3.3631438196072,7.97601573851516,7.37513712654495,4.57472922826267,5.04150184583422,2.78047249225598,5.57203466435466,3.70407845534298,3.78165106955137,5.61770549850588,5.66165395652373,5.11494298912067,4.97101854085205,5.39409937956521,3.42117916775928,4.26140524053378,3.93528463494808,2.93107514486019,4.88321283975857,4.02410102099429,6.07179780309281,3.94943639792353,3.2833492815819,3.64809642956351,2.77779976108131,3.51280184465681,2.41571553768669,1.05144974282064,2.57261530948211,8.92130714056255,3.43785736662608,4.90562976231038,4.64473343720877,5.92790322081629,5.84882221407693,5.78182913996663,5.1360919050391,6.64340686162316,3.29397909448022,2.76468729680296,4.77495532898762,6.23885078781184,5.39291645192533,5.18731319699266,5.57595565112228,6.82804443431094,3.77020091612105,7.88954149711563,3.46207257337034,3.10323979468201,4.9095073923223,4.23684798732524,4.87113488332687,3.61097074035162,3.08492909804501,2.37162101669719,3.33690211432188,2.55526693647164,2.69834534861824,2.43432145666204,0.964708639009667,3.31013607315846,4.02774592431135,2.59416362840057,2.19649130550465,0,1.48856379067401,2.18426371180192,2.52578877947112,3.76734568396016,5.30687873499704,3.51031061316549,4.54779388249163,4.4000543639347,3.22515662972857,4.22442446919304,4.35516269348721,6.66522194480839,4.87834119644497,5.67486518782288,4.4292937929755,5.26200736569707,2.29408640602033,3.10832967358612,4.05017364028232,3.01582567878545,2.17562273527484,3.44234991113325,4.96686143348518,0.642202359951168,1.05490517932983,0.983609672260053,4.54447668967871,6.31016438832513,5.85658116444958,7.97066571611356,5.4962823529087,5.79276552614225,11.0399847007645,10.5250782435473,4.9683495844923,8.69633111482352,6.42642632843614,8.23252494207958,3.02711526234334,3.58351310577867,3.95928295134085,6.63725691699814,3.39892890616974,2.41858845571801,3.20628635585027,2.06711325016541,3.68922177532713,5.94385074286909,6.90714086007261,2.49548164869305,4.42451461110142,5.27093042874994,3.09406629744561,2.7235168460303,3.96134406868882,2.97524972700335,4.92975180572662,3.3694644392032,3.38900753443934,3.29098041204242,3.65357938937519,2.3467170806371,2.1183207086382,3.96951116498931,5.7710188529518,3.71368181400583,4.58378229453985,4.65552141612232,5.41664969158702,4.37221254944776,1.66882771809459,3.07567585436135,4.12773735926445,2.40752885580625,1.88368457004691,2.59719032669948,4.57556346413045,6.28920190977265,5.87796099759364,5.11339903076368,3.81868247206045,7.27572785236611,6.30290348093231,3.56417624711944,5.43629569637619,3.27543845619266,3.37160865962052,4.62859352061881,4.71160695571253,6.22151871800606,9.32008969630389,0.56369293868419,4.03694674318743,2.64733584731356,1.94451188344048,2.58319646955462,3.8859908862879,3.16864544343536,4.03633593016245,6.60613869881978,1.69108884578204,1.44015003128933,12.0084225838708,2.8381530140623,4.00572732942826,4.80707045017842,10.025494957379,12.9142880607822,9.73583141111748,12.2582307554899,12.0150075438296,12.421709484765,11.8974898461472,13.7415611843051,12.6999630965235,16.4796432076012,4.30787728868902,4.88369097422942,2.42227412845584,2.51826924546118,3.67060228661162,4.129014459926,4.57879060668163,4.28736758158132,5.517293144389,0,1.84130094602871,2.29158205375759,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,2.71885445390523,1.55328093525546,4.77421798887213,5.58634822761443,4.43907374960749,2.43106717068294,3.14419743941973,4.41224420280034,1.77797382241292,1.64828045791115,3.53011130550997,4.04315538822076,3.8021894983536,4.33840585187975,3.83930180626518,3.64943368707755,3.79074095107048,5.23923060411381,4.1718357340148,3.6652751888104,1.23625770240992,4.56316652416632,5.14303878578123,3.19456451086807,3.81497903915713,2.32554266611726,3.3879376949519,4.14611578669215,3.84148743032822,4.73525480588117,4.20992752922171,5.61142271657738,3.79632057997357,4.53120618927592,4.09231043169689,4.49316839439301,3.85813221962283,3.74715866906919,3.50897412668113,4.94203424311086,2.29545998482612,3.75005412503176,2.78241402744506
|short_description=p3@Usp3
}}
}}

Revision as of 03:34, 19 April 2012

Short description:p3@Usp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Usp3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_144937, uc009qey.1, uc009qez.1, uc012gvp.1_5end
EntrezGene:Usp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Usp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.71
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H13.18
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C65.17
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E27.98
forelimb, embryo E12.CNhs10600.359-14H27.38
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G74.91
kidney, neonate N10.CNhs11206.758-6D54.24
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I78.23
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E37.28
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D43.56
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A94.63
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I16.22
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D96.61
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C54.81
thymus, embryo E17.CNhs10581.478-18C110.03
thymus, embryo E18.CNhs10595.1273-19G412.91
thymus, neonate N02.CNhs11181.1541-43F89.74
thymus, neonate N03.CNhs11137.2104-43C712.26
thymus, neonate N06.CNhs11197.681-26C412.02
thymus, neonate N07.CNhs11211.713-19D312.42
thymus, neonate N10.CNhs11194.748-24E411.90
thymus, neonate N20.CNhs11186.820-7A213.74
thymus, neonate N25.CNhs11125.1362-25G712.70
thymus, neonate N30.CNhs11132.1393-42G216.48
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:66440779..66440792,-&oldid=1013719"