Additional information and matches to known motifs for motif7

Detailed information for motif7

P-value:1e-22
ln P-value:-5.071e+01
Information content per bp:1.532
Number of target sequences with motif:519.0
Percentage of target sequences with motif:26.92%
Number of background sequences with motif:8531.0
Percentage of background sequences with motif:  17.91%
Average position of motif in targets:211.6 +/- 179.8bp
Average position of motif in background:203.8 +/- 119.8bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.21
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PH0012.1_Cdx1

Match rank:  1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAACCG--
NAATTTTATTACCTNN
  

PH0013.1_Cdx2

Match rank:  2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAACCG--
NAATTTTATTACCNNN
  

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq/Homer

Match rank:  3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTATAACCG
NTTTTATGAC--
  

MA0165.1_Abd-B

Match rank:  4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTTATAACCG
TTTATGA---
  

PH0046.1_Hoxa10

Match rank:  5
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATAACCG-
TNAATTTTATTACCTN