Additional information and matches to known motifs for motif21

Detailed information for motif21

P-value:1e-12
ln P-value:-2.982e+01
Information content per bp:1.919
Number of target sequences with motif:312.0
Percentage of target sequences with motif:16.18%
Number of background sequences with motif:5080.7
Percentage of background sequences with motif:  10.67%
Average position of motif in targets:226.5 +/- 189.2bp
Average position of motif in background:202.6 +/- 113.0bp
Strand bias (log2 ratio + to - strand density):0.4
Multiplicity (# of sites on avg that occur together):  1.09
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0252.1_vis

Match rank:  1
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GTGACAC
-TGACAG
  

MA0204.1_Six4

Match rank:  2
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GTGACAC
-TGATAC
  

TGIF1_si_HM09

Match rank:  3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GTGACAC
GTGACAG
  

MA0288.1_CUP9

Match rank:  4
Score:0.85
Offset:1
Orientation:forward strand
Alignment:GTGACAC---
-TGACACATT
  

PH0164.1_Six4

Match rank:  5
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----GTGACAC------
ATAAATGACACCTATCA