Additional information and matches to known motifs for motif20

Detailed information for motif20

P-value:1e-13
ln P-value:-3.038e+01
Information content per bp:1.710
Number of target sequences with motif:210.0
Percentage of target sequences with motif:10.89%
Number of background sequences with motif:3033.8
Percentage of background sequences with motif:  6.37%
Average position of motif in targets:214.4 +/- 196.6bp
Average position of motif in background:209.3 +/- 124.6bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0391.1_STB4

Match rank:  1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CTTTYCGAA
--TTCCGAG
  

MA0282.1_CEP3

Match rank:  2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CTTTYCGAA
-TTTCCGAG
  

MA0311.1_HAL9

Match rank:  3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTTTYCGAA
--TTCCG--
  

MA0380.1_SIP4

Match rank:  4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTTTYCGAA
--CTCCGGA
  

MA0185.1_Deaf1

Match rank:  5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTTTYCGAA
---CACGAA