p-value: | 1e-6 |
log p-value: | -1.419e+01 |
Information Content per bp: | 1.886 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 5.26% |
Number of Background Sequences with motif | 40.5 |
Percentage of Background Sequences with motif | 0.09% |
Average Position of motif in Targets | 84.3 +/- 45.1bp |
Average Position of motif in Background | 95.1 +/- 70.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.75 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGATGGACTTT---- NNATTGGACTTTNGNN |
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![](motif9-1-homer.png)
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MA0598.1_EHF/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGATGGACTTT CAGGAAGG----- |
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![](motif9-2-homer.png)
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MA0114.2_HNF4A/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGGATGGACTTT------ ---CTGGACTTTGGACTC |
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![](motif9-3-homer.png)
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HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGGATGGACTTT-------- ----TGGACTTTGNNCTNTG |
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![](motif9-4-homer.png)
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MA0484.1_HNF4G/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGGATGGACTTT------- ----TGGACTTTGNNCTCN |
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![](motif9-5-homer.png)
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AGGATGGACTTT CTACTAGGATGTNNTN- |
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![](motif9-6-homer.png)
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MA0136.1_ELF5/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGATGGACTTT AAGGAAGTA---- |
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![](motif9-7-homer.png)
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ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGATGGACTTT AGGAAACAGCTG |
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![](motif9-8-homer.png)
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MA0105.3_NFKB1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGGATGGACTTT--- ----GGGAATTTCCC |
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![](motif9-9-homer.png)
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MA0474.1_Erg/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGATGGACTTT ACAGGAAGTGG--- |
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![](motif9-10-homer.png)
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