p-value: | 1e-8 |
log p-value: | -2.065e+01 |
Information Content per bp: | 1.881 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 7.89% |
Number of Background Sequences with motif | 61.7 |
Percentage of Background Sequences with motif | 0.13% |
Average Position of motif in Targets | 67.7 +/- 45.2bp |
Average Position of motif in Background | 101.6 +/- 75.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGATAAACC GTCATAAAAN |
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![](motif4-1-homer.png)
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PH0016.1_Cux1_1/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGATAAACC--- TNAGNTGATCAACCGGT |
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![](motif4-2-homer.png)
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PH0013.1_Cdx2/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTGATAAACC-- AAAGGTAATAAAATTT |
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![](motif4-3-homer.png)
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MA0465.1_CDX2/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGATAAACC AAGCCATAAAA- |
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![](motif4-4-homer.png)
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PH0012.1_Cdx1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTGATAAACC-- TAAGGTAATAAAATTA |
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![](motif4-5-homer.png)
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Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTGATAAACC NBWGATAAGR- |
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![](motif4-6-homer.png)
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PH0073.1_Hoxc9/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTGATAAACC-- GGAGGTCATTAATTAT |
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![](motif4-7-homer.png)
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GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGATAAACC -AGATAASR- |
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![](motif4-8-homer.png)
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Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTGATAAACC-- ----TAATCCCN |
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![](motif4-9-homer.png)
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HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTGATAAACC- GGCCATAAATCA |
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![](motif4-10-homer.png)
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